Gene
| Gene Model ID | habu1_s2789_g10003 |
|---|---|
| Locus | habu1_scaffold2789 : 800909 ... 804883 : + |
| To GenomeBrowser | habu1_scaffold2789:800909..804883 |
| Genes list of scaffold | habu1_scaffold2789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g10003.t2 | 1 | 1 | zf-LITAF-like | 124 | 196 | 2.2e-22 | 78.6 | 6.4e-26 | 3.1e-22 | 78.1 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.4 |
| Venom grand-1 | 11.6 |
| Pit, infrared sensing | 7.0 |
| Nose | 10.7 |
| Brain-1 | 13.1 |
| Eye | 9.7 |
| fetal fibroblast | 6.2 |
| venom gland-2 | 10.6 |
| Brain-2 | 13.5 |
| Spleen | 7.6 |
| Lung | 10.7 |
| Liver | 4.7 |
| Kidney | 18.8 |
| Pancreas | 11.5 |
| Small intestine | 12.5 |
| Large intestine | 8.7 |
| Stomach | 6.7 |
| heart | 6.4 |
| ovary | 4.9 |
| cheek muscle | 16.8 |
Transcript
| Transcript ID | habu1_s2789_g10003.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10003.t1 cgcgagtctcccaggcacccgatcagccctgccgggttcagacaaccttgccgacacgcgtctgggcccggtgggagcca ttccggcgcgcgggggaaggcgcttcctcaatctggattggtcccgcccgccccgaaaccccgccccgctctgccgggct ccgaagcggccggctggtctcgctcggcagcatgtccaacgaccctcctccaccctaccctggggggccatcagcacccc tcctggaagagaaggatgggttccccttccccgcaggtaggatctctccagccatggtgcagcccccttccgatgttggc cccccgccctatgaagcaatgcctcccccccagtcgggcttcatcccccctcctatgccagcagagagctcgatgcccta cttccctcctggtggctactatgtgcccccggggccacacgcccctatgggctactattctcccactggcccctgtgccc ctgctggagggcaaacggcaaccatgctagtgccatcgggcaccgcaaccactgtgacggtcctgcagggcgagatattc caggctgcccctgtcccaacagtgtgcccgcattgccagcaggccatcaccactaagatcacctatgaaatcggcctcat gaactttctgctgggcttcttctgctgctttattgggtgcaacctgggctgctgcttcatcccctgcctgatcgatgaat ttaaggacgtgacccatacctgccccaactgcaaggcctacatctacacccacaagcgcaagtgctagcaggccctgctc ggctggaaagctctgctgcggctgccacccccctggtttacctttcccacctgcttttgtgcttttctgctccccttcat ccttcgcccagagaggctccggggctgtggtgccccccagggctgccggggatctgctcggctggctcttgggggggaga tggagaagctgggtcagacgggtggctctcctccaaggcaaggcactccttcagtgggtggctctcctccaggctgcggc tgccttcagtggaagaaggccggcctcacccgcagcaggcagaaggagaaggagcaaagtccgtggtgctcttggctttt ttattttattttattttcttaattgaagaatttaaatatcatggtaaaagtaaatacaattaaagtcagaaaaagatagt atagaa |
|
| Transcript ID | habu1_s2789_g10003.t2 |
| Definition | - |
>habu1_s2789_g10003.t2 gcgcagctgctgacccgggagcctcggggccactgcagcatgtccaacgaccctcctccaccctaccctggggggccatc agcacccctcctggaagagaaggatgggttccccttccccgcaggtaggatctctccagccatggtgcagcccccttccg atgttggccccccgccctatgaagcaatgcctcccccccagtcgggcttcatcccccctcctatgccagcagagagctcg atgccctacttccctcctggtggctactatgtgcccccggggccacacgcccctatgggctactattctcccactggccc ctgtgcccctgctggagggcaaacggcaaccatgctagtgccatcgggcaccgcaaccactgtgacggtcctgcagggcg agatattccaggctgcccctgtcccaacagtgtgcccgcattgccagcaggccatcaccactaagatcacctatgaaatc ggcctcatgaactttctgctgggcttcttctgctgctttattgggtgcaacctgggctgctgcttcatcccctgcctgat cgatgaatttaaggacgtgacccatacctgccccaactgcaaggcctacatctacacccacaagcgcaagtgctagcagg ccctgctcggctggaaagctctgctgcggctgccacccccctggtttacctttcccacctgcttttgtgcttttctgctc cccttcatccttcgcccagagaggctccggggctgtggtgccccccagggctgccggggatctgctcggctggctcttgg gggggagatggagaagctgggtcagacgggtggctctcctccaaggcaaggcactccttcagtgggtggctctcctccag gctgcggctgccttcagtggaagaaggccggcctcacccgcagcaggcagaaggagaaggagcaaagtccgtggtgctct tggcttttttattttattttattttcttaattgaagaatttaaatatcatggtaaaagtaaatacaattaaagtcagaaa aagatagtatagaa |
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Protein
| Protein ID | habu1_s2789_g10003.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10003.t1 MSNDPPPPYPGGPSAPLLEEKDGFPFPAGRISPAMVQPPSDVGPPPYEAMPPPQSGFIPPPMPAESSMPYFPPGGYYVPP GPHAPMGYYSPTGPCAPAGGQTATMLVPSGTATTVTVLQGEIFQAAPVPTVCPHCQQAITTKITYEIGLMNFLLGFFCCF IGCNLGCCFIPCLIDEFKDVTHTCPNCKAYIYTHKRKC |
|
| Protein ID | habu1_s2789_g10003.t2 |
| Definition | - |
>habu1_s2789_g10003.t2 MSNDPPPPYPGGPSAPLLEEKDGFPFPAGRISPAMVQPPSDVGPPPYEAMPPPQSGFIPPPMPAESSMPYFPPGGYYVPP GPHAPMGYYSPTGPCAPAGGQTATMLVPSGTATTVTVLQGEIFQAAPVPTVCPHCQQAITTKITYEIGLMNFLLGFFCCF IGCNLGCCFIPCLIDEFKDVTHTCPNCKAYIYTHKRKC |
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