Gene
| Gene Model ID | habu1_s2789_g10005 |
|---|---|
| Locus | habu1_scaffold2789 : 811448 ... 818128 : - |
| To GenomeBrowser | habu1_scaffold2789:811448..818128 |
| Genes list of scaffold | habu1_scaffold2789 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dnaj homolog subfamily a member mitochondrial | GO:0000122 GO:0005133 GO:0005524 GO:0005634 GO:0005667 GO:0005884 GO:0006264 GO:0006457 GO:0006469 GO:0006919 GO:0006924 GO:0007264 GO:0007569 GO:0008285 GO:0008385 GO:0009408 GO:0019897 GO:0019901 GO:0030971 GO:0031072 GO:0031398 GO:0031594 GO:0032088 GO:0033077 GO:0033256 GO:0042102 GO:0042645 GO:0043124 GO:0043154 GO:0045211 GO:0046872 GO:0050821 GO:0051059 GO:0051082 GO:0060336 GO:0071340 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g10005.t2 | 1 | 1 | DnaJ | 83 | 145 | 8.4e-28 | 95.8 | 3.5e-31 | 1.3e-27 | 95.2 |
| habu1_s2789_g10005.t2 | 1 | 1 | DnaJ_CXXCXGXG | 228 | 288 | 9.7e-11 | 41.5 | 5.4e-14 | 2.0e-10 | 40.5 |
| habu1_s2789_g10005.t2 | 1 | 1 | CTDII | 337 | 415 | 9.9e-21 | 73.4 | 2.8e-23 | 1.0e-19 | 70.1 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 8.4 |
| Venom grand-1 | 19.6 |
| Pit, infrared sensing | 9.9 |
| Nose | 8.0 |
| Brain-1 | 5.7 |
| Eye | 10.6 |
| fetal fibroblast | 21.5 |
| venom gland-2 | 20.8 |
| Brain-2 | 8.1 |
| Spleen | 9.0 |
| Lung | 9.7 |
| Liver | 16.1 |
| Kidney | 20.2 |
| Pancreas | 21.2 |
| Small intestine | 20.7 |
| Large intestine | 13.5 |
| Stomach | 16.7 |
| heart | 23.3 |
| ovary | 40.9 |
| cheek muscle | 48.6 |
Transcript
| Transcript ID | habu1_s2789_g10005.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10005.t1 ggcgcactgcgactgagcaacccaagatggcagccggctgcgtctcacgctggttggcggaggcagcaaccgctgccggg agctgccggacgggcggcggagagccgcggcgcctggcgctgctgttgggtctggcccgctggcggaacgtggcccccgt cgcctctcgcgtggccatggcaccgcggatgggaaaccgcttcggaatccgaccgcttcccctcgtctgggcggcctcga ttcacagcagctcctcgaccagcagcaaagaggattattaccagattctgggagtgcctcgcagcgccagccagaaggag atcaagaaggcctattaccagcttgccaagaagtatcatcctgacactaataaggatgaccccaaagcaaaggagaagtt ttctcaattggctgaggcctatgaggtcttgggagatgaagtaaagcggaaacagtatgacacttacggtacagcggact ttggttttggctctggctcagcaggttctggacagcagtacaggcacactggcccaactattgaccctgaggagctgttc aggaagatctttggggagttctcgcagtccccttttggagactttagcaccatctttgaccagccccaggagtacattat ggatctgaccttcagccaggcggcaaagggcgtcaacaaggagatcgtggtgcagatcagtgacacctgccagcgctgtg agggcagagggcatgaaccgggcaccagagtagtgcattgctcctactgcaatgggactggcacagagacgataaacacg ggcccctttgtcatgcgttcgacatgtcggcgatgcggtgggcgaggctcagttgtaactaacccatgtgtgatttgtcg tggctctggccaaaccaagcagaagaagacagtgatggtcccggtcccagcaggtgtggaggacgggcagaccgttcgga tgcctgttggaaggaaagaaattttcattaccttcagggttcaaaaaagccccgtgttccggagagatggtgctgatatc cactctgacgtcttcatctccatagcacaagctgttcttggagggacagcgaggtcgcccggcctgtatgagacgatcaa cgttatgatcccccctggcatccaggctgaccagaggattcggatgagtgggaaggggattcccagggtgaacagctacg gttatggagaccactacattcatatcaaggtcaaagttcccaagaggctgactgatcgccagcgagccttgatgctgagc tatgcagaagatgaaactgacgtagaagggactgtgaatggcatcgccagcacaaccactggtaaacgttccactggaaa ctagatgatggagcagtagcagtctggaaggcgtgatgctggcagctttggaaccgaagatggacacacgttgaaggtgc attgacacgttgatggctccattgaaggaaggaggcctctcctctagatgtcagattgcagcgttgtcaactgggggagt tgtgaaaggttgttggccttcctggacttgtttctctctgaatggagcagactgcttgggggggggggcaggttgaggag caaaaataaagtgtaccttgtgctgagtnnnn |
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| Transcript ID | habu1_s2789_g10005.t2 |
| Definition | - |
>habu1_s2789_g10005.t2 ggcgcactgcgactgagcaacccaagatggcagccggctgcgtctcacgctggttggcggaggcagcaaccgctgccggg agctgccggacgggcggcggagagccgcggcgcctggcgctgctgttgggtctggcccgctggcggaacgtggcccccgt cgcctctcgcgtggccatggcaccgcggatgggaaaccgcttcggaatccgaccgcttcccctcgtctgggcggcctcga ttcacagcagctcctcgaccagcagcaaagaggattattaccagattctgggagtgcctcgcagcgccagccagaaggag atcaagaaggcctattaccagcttgccaagaagtatcatcctgacactaataaggatgaccccaaagcaaaggagaagtt ttctcaattggctgaggcctatgaggtcttgggagatgaagtaaagcggaaacagtatgacacttacggtacagcggact ttggttttggctctggctcagcaggttctggacagcagtacaggcacactggcccaactattgaccctgaggagctgttc aggaagatctttggggagttctcgcagtccccttttggagactttagcaccatctttgaccagccccaggagtacattat ggatctgaccttcagccaggcggcaaagggcgtcaacaaggagatcgtggtgcagatcagtgacacctgccagcgctgtg agggcagagggcatgaaccgggcaccagagtagtgcattgctcctactgcaatgggactggcacagagacgataaacacg ggcccctttgtcatgcgttcgacatgtcggcgatgcggtgggcgaggctcagttgtaactaacccatgtgtgatttgtcg tggctctggccaaaccaagcagaagaagacagtgatggtcccggtcccagcaggtgtggaggacgggcagaccgttcgga tgcctgttggaaggaaagaaattttcattaccttcagggttcaaaaaagccccgtgttccggagagatggtgctgatatc cactctgacgtcttcatctccatagcacaagctgttcttggagggacagcgaggtcgcccggcctgtatgagacgatcaa cgttatgatcccccctggcatccaggctgaccagaggattcggatgagtgggaaggggattcccagggtgaacagctacg gttatggagaccactacattcatatcaaggtcaaagttcccaagaggctgactgatcgccagcgagccttgatgctgagc tatgcagaagatgaaactgacgtagaagggactgtgaatggcatcgccagcacaaccactggtgagctgtggagctgtca gatcttggctgcacttcggggctggcaggtcgtctttggttatagttgagctgctagctctgtttggtggtgtaaactat ggccttgaatgatgtcgaccacagtggaattacaaacttctactcagacggtgtcaccatttttccttaggcaagaaaag gctactattatgtgtgttttttacccactgtgctttgctcaattttctgggcttccacaatgcactgaactttactgact tctgaagctgaattagtgcagtagacgagttggcagcatggccggctgatggcttagcagagggaacaaatcccccaact gagagcagtttttggccttcctgtagtgctttccctgccctgcagtgaccttcaagatgcaattggttgacttccatttc atgagcattcttgtctttccaccgattcagggctcgagttgtttgctcaccaagacattcagagcactttagcaagtcta caagggagaggggggtgctttgctttaatataaggatgttctctatgacattgacatgtgctagaatgcgtacctcgtgt tgagatgaagtactcatagtttcgcaatcggtgaacgaatagggaggctaaatgataagtgacagaaataaagctgtagt gagaagacagccaaaatagttgctgtgtgcagggagtgtcattaaacatatatagcacaacaggagcaatctaggagaaa ggggagaccccagaaagtgctacaggcatgttccgccaaagacaagtttaggtgaaaagagtttgtcccatttccctatc atttgaactttcctcaggtcctgggcaaagatggcctgagaaagggggaactagcatcttctcagcttcacacacacacc cccggccgctcctgaggctgggaaattgccctaggtgggcaaggatccttctcacaacatgtattgaccaagctctctgc tatttgtgtctaggtggcaggggcacgactagatcaggggcaggcgaggagaggcctgaggcaggggacggcacagaggg attcctagctaaacttaagaaaatgtttagcttctgattaactgcaccagaggtaaacgttccactggaaactagatgat ggagcagtagcagtctggaaggcgtgatgctggcagctttggaaccgaagatggacacacgttgaaggtgcattgacacg ttgatggctccattgaaggaaggaggcctctcctctagatgtcagattgcagcgttgtcaactgggggagttgtgaaagg ttgttggccttcctggacttgtttctctctgaatggagcagactgcttgggggggggggcaggttgaggagcaaaaataa agtgtaccttgtgctgagtnnnn |
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Protein
| Protein ID | habu1_s2789_g10005.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10005.t1 MAAGCVSRWLAEAATAAGSCRTGGGEPRRLALLLGLARWRNVAPVASRVAMAPRMGNRFGIRPLPLVWAASIHSSSSTSS KEDYYQILGVPRSASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLGDEVKRKQYDTYGTADFGFGSGSAG SGQQYRHTGPTIDPEELFRKIFGEFSQSPFGDFSTIFDQPQEYIMDLTFSQAAKGVNKEIVVQISDTCQRCEGRGHEPGT RVVHCSYCNGTGTETINTGPFVMRSTCRRCGGRGSVVTNPCVICRGSGQTKQKKTVMVPVPAGVEDGQTVRMPVGRKEIF ITFRVQKSPVFRRDGADIHSDVFISIAQAVLGGTARSPGLYETINVMIPPGIQADQRIRMSGKGIPRVNSYGYGDHYIHI KVKVPKRLTDRQRALMLSYAEDETDVEGTVNGIASTTTGKRSTGN |
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| Protein ID | habu1_s2789_g10005.t2 |
| Definition | - |
>habu1_s2789_g10005.t2 MAAGCVSRWLAEAATAAGSCRTGGGEPRRLALLLGLARWRNVAPVASRVAMAPRMGNRFGIRPLPLVWAASIHSSSSTSS KEDYYQILGVPRSASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLGDEVKRKQYDTYGTADFGFGSGSAG SGQQYRHTGPTIDPEELFRKIFGEFSQSPFGDFSTIFDQPQEYIMDLTFSQAAKGVNKEIVVQISDTCQRCEGRGHEPGT RVVHCSYCNGTGTETINTGPFVMRSTCRRCGGRGSVVTNPCVICRGSGQTKQKKTVMVPVPAGVEDGQTVRMPVGRKEIF ITFRVQKSPVFRRDGADIHSDVFISIAQAVLGGTARSPGLYETINVMIPPGIQADQRIRMSGKGIPRVNSYGYGDHYIHI KVKVPKRLTDRQRALMLSYAEDETDVEGTVNGIASTTTGELWSCQILAALRGWQVVFGYS |
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