Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2789_g10006
Locus habu1_scaffold2789 : 819449 ... 824549 : +
To GenomeBrowser habu1_scaffold2789:819449..824549
Genes list of scaffold habu1_scaffold2789

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.8
Venom grand-1 0.3
Pit, infrared sensing 0.6
Nose 0.5
Brain-1 0.4
Eye 0.8
fetal fibroblast 1.0
venom gland-2 0.6
Brain-2 0.6
Spleen 1.1
Lung 1.7
Liver 0.5
Kidney 0.6
Pancreas 1.7
Small intestine 3.0
Large intestine 1.2
Stomach 0.8
heart 0.5
ovary 0.1
cheek muscle 0.3

Transcript
Transcript IDhabu1_s2789_g10006.t1
Definition-
>habu1_s2789_g10006.t1
atccgaggctggagggcggcagcagcgacagcatgagccggttcagggtgtccaggttccggcacgtcgaggccaaagtg
gcccgcaaggaggaattggagctgccggaagttggaggcccagcaggagcagcagcagcggggaatgcgccgagcatctc
ctggttgcgaagccgggatcccatcggcccgtcgcttgggccgcccatggttagggaggacgggttgggtctcatctcgc
cggcggaaaaagcttcggaagagcctctttaagcagagccgcctttgctgctcaaacttccggctggagaggaaatgcga
aaaacgctatttgtgcaacaattctgttttattatttgacaggcgttttgttctggggcctggccattttcccttccatg
ccagccggaccagtctcggcctccctgagaagctggttcagcagtgcttcagggaaacactgagggagatggtgggcaag
gggagagagctgaatttggcagtcttaggcagggaaataaaatctccatctcggatggggggagtcaaagaaagaaagaa
gggggcagccacagctcatgatggcataagaggcccattggcgcagctctagccagagggaggactcggcagttggaccc
ttgagtccggggaagctgctgcagcttggcaaggaggctttcctggctccctttttctggacagtttggccaactctgtc
ccgaagcgtcttctccctgtccttggctgtgccccggtcagctctgctgctttaggccattcccactggcaaggaagctg
ccctttgctcaggccagatgtcccccactgcctcaacctgcttgtgggacaatgtgggtctgtggaggcctttcctctcc
caccccccagcttgcactcctctgcacaacaggcctggattggagacctccaaagcagcggcccttcagggaacccccgc
atcaaggccaactccctctggatcgcattcagcacagacctggcaggtaagaggagcatagcccagcctcgcttttgtgc
ttgcacttcgacctggcaaggagtttgcgaaaatcccctgggtgtggcccagggaatgtctctgctgaggggggagaggg
gtggaccccctccggctggctccagtctggctgctcgggaggagctttctttcctttctgctcttccctctagcagagaa
cttgccttctgccactccgcccccagacttgaaaagtcaaacatctcctgttgattggcactctggaggggtagaattgg
cagaggggcccatcaggactggcctgacttgggtggggcctccctgctgtgtactgggcaccttgggccaggtctggcct
gaagccaaggtttccgaaaccgacacccactgatacctgtctgggcagctcatgagtggaaggcaaaccagggacagatt
tccttctgcccggaaggtgtggtgcctgatgtctgcccaggtggctggcatcatgtttttttcccacttttgccaggcgt
gctgggtactgtgcccctggagagtccaaaggggatcaagacagttgtctctcatctgcactgccattcagatgtggtga
cagactttgacttctctccctttgaccagcagctgctggccactggatcagcggacaaagctgtaagtgcagcccccatt
gcccagcttccccccaaggtccctctccctgcaagaggggctgctgtgagaactgggatgggtgcagagggaaagagcga
tggcaccgttaactgagagctttgcccctcgcccacagccctgcctgcccccgagggagccctgcatcctctgagtcttg
agagcggatgctgagcttctcctggcctcaagtcaccagctgagtgctgccagtggtctctttcctgcaggtgaaagtgt
ggcgcctccttgaggccgaccaggacctctccgcttccccccatgtgatgctggggccgcaggggagccaggtggaggtg
cttcttttccaccccacagcggatggtgttctggccagtgcagctgggaaggcagtgaagatttgggatgtggagcagca
gcagattcttattggtacgatcctaagtgggctgggagatgctggggatcccgccggttagccccagtgaaagcggagca
gccattcccaggccagcccctcctgccctgtgcttcgtgctgcccaattctctgccagtctggagcggttccctttgtcc
atcccaagcaagcaccaaaagctacccctgcatgcctggccaggctccccctgggctgtggtcctcccagggaacctgac
caatttctgtagaagcagagctgagatgggggctgtgtctttggactcccttcctggaggattcacaggccagcctcttt
ggccactgcccacacaggtagaggctggggcaagatggccagaaagagaggcggcatgggagcctccagtcgggaagagg
ggccggagcaatggcagtaagaggagaagccaggcaggcgcaaggaccccagagagcccgttgcctagcaactttatggg
ccctgcggcggctttctgcccaggcgccgccactccgatttcagaaggcggaaggagacggggtattttccgggccaagg
ataggaagggctttgtttaccaagggttgtgctcctcttagcagcggtaggctgggggtgggggcaactttggaattgct
caggctgctgccttgcagagaaggcgtctggtgcacctggagggatcgcagccctccacatgtgcacccttgacccggtt
caggggctccggcagtagcccccgctccagggaagggagccagcattgtgggttaagtgggaagaaagggcagcaggcgg
aaaagatccgagtcagagggaaacaacccagaaggagctgagcagtacttcagcttgctcagttgtctccatgcaaagtg
gggttcccttttgcacattgtgcaagcccagttgtggcttagtcagtaaattaagattaataattgtggctt
Transcript IDhabu1_s2789_g10006.t2
Definition-
>habu1_s2789_g10006.t2
atccgaggctggagggcggcagcagcgacagcatgagccggttcagggtgtccaggttccggcacgtcgaggccaaagtg
gcccgcaaggaggtgggtgggcggcagcgcgagtcgtgcttaccgccggatcgtctccccggtgaaccgccgtacccacc
tgccggggcgcgggcggcagctcgagcgggagccctgccctgcgtggctcggggtccatcgggaggaagcgaccggctca
gccctcggcctctgtcagcgaccccccgaagagggaagccggcgtttcccgaggcgccgcccgactgcagagctgagccg
cgctcgcatgggcgcctccctcctgcctagtgagccgaggccgggcgccctcccgaccgggtcttggcccggggcagtcg
aggctcccacgagcctcggccgagcgaaagggaagttgtcggggctgcgtccggggaaattgagtctgctcagagggcga
gcaaggcgtctgtagaagtgctgcctgctaaaaggggccggcttgcctggggcggcatcccgggtgcgaattgggctggg
ttgggggtgcaacccccggcagtccggcaggtgcctttccgccttcgctgtagccaggaattggagctgccggaagttgg
aggcccagcaggagcagcagcagcggggaatgcgccgagcatctcctggttgcgaagccgggatcccatcggcccgtcgc
ttgggccgcccatggttagggaggacgggttgggtctcatctcgccggcggaaaaagcttcggaagagcctctttaagca
gagccgcctttgctgctcaaacttccggctggagaggaaatgcgaaaaacgctatttgtgcaacaattctgttttattat
ttgacaggcgttttgttctggggcctggccattttcccttccatgccagccggaccagtctcggcctccctgagaagctg
gttcagcagtgcttcagggaaacactgagggagatggtgggcaaggggagagagctgaatttggcagtcttaggcaggga
aataaaatctccatctcggatggggggagtcaaagaaagaaagaagggggcagccacagctcatgatggcataagaggcc
cattggcgcagctctagccagagggaggactcggcagttggacccttgagtccggggaagctgctgcagcttggcaagga
ggctttcctggctccctttttctggacagtttggccaactctgtcccgaagcgtcttctccctgtccttggctgtgcccc
ggtcagctctgctgctttaggccattcccactggcaaggaagctgccctttgctcaggccagatgtcccccactgcctca
acctgcttgtgggacaatgtgggtctgtggaggcctttcctctcccaccccccagcttgcactcctctgcacaacaggcc
tggattggagacctccaaagcagcggcccttcagggaacccccgcatcaaggccaactccctctggatcgcattcagcac
agacctggcagcagagaacttgccttctgccactccgcccccagacttgaaaagtcaaacatctcctgttgattggcact
ctggaggggtagaattggcagaggggcccatcaggactggcctgacttgggtggggcctccctgctgtgtactgggcacc
ttgggccaggtctggcctgaagccaaggtttccgaaaccgacacccactgatacctgtctgggcagctcatgagtggaag
gcaaaccagggacagatttccttctgcccggaaggtgtggtgcctgatgtctgcccaggtggctggcatcatgttttttt
cccacttttgccaggcgtgctgggtactgtgcccctggagagtccaaaggggatcaagacagttgtctctcatctgcact
gccattcaggtgagcgagagacgctgagggggggggcttttagggacatgggctggtctcctaggtagagaatggaaaag
cttagtgctcgggtgagaaaaagagtacatagagaaagagagaaccaggctatctgctttcaggtctgttggccaattgc
ttaagaaaagctgctgctgttgcaattgctcccttgcgcagctgcccaaaggaagagtgtcacacggctctgacccctcc
ccccagccttgtcctacttctgacagactctgagccagaggcaatccagcctctgctgcacggggtctcccttgctgggc
ttgcatgcagatgggagtgggagtttcacacttagcctgacatgggggcatcgtagaagcagaagccagcctgcctggga
ctttctgagtcatccacataggggggtggccccctccttctgctacatgctcagccagagggcgtgtcaggggcattgca
cccccacctccaagggcccaggactataggctgccagctgagcgcctgcgctctggatgccataatctggacagaggctg
taatgcaagagctgcactctgcctgcctgcccctggtccctcggagggatgaaacccctggctgtgagctggcctcagaa
accttgctgggccagcccaaagccagaagctgctgctctcctttctgggggaggcactttgcactggtggtgctgcagtc
caaaatctctgtcatctgcagcttgaggggggaagcaggagaagcccctggatggctgtgcttactcttggaaatgagaa
aatgacgcatcgtgcctaagccccaaagggcttagctactttggcacacagacccacatctgaaagcaaaggggaggggg
ctaaatcctcctgcacatgggaaacccggacaggaaggggagctgctggaccatgggtgcctggagcgagatgggcaggt
gtgcagatgggcaggggactccagaaatggaaaatggaagagtgaatcaaataatagcaggatcagaccttccttcctcc
ctgccgaccaatccccccagataatggcaatttcatcccactgggtggaacagggtgggtgatttggtgccagactgaat
ggccacggctgggagaagctgtgcccctttgcttgggtgaataaagagccctcgggaggttcccctcttcaagtccagct
ggctctgcgctgcagtggaaaacccgctgacagatgtgatggcatcacatctgccacctttacagaggtcacaggccccc
tcggtctgggcctgagcccagaagtcccagacaggaaccaagggcaggctctgcgatgaccctttggctgcagaagagaa
gagaaaagcagtgactatcaccctccagttccaatcctccctgtcccgtcctgtccccagcatgctgggaggcagttcct
cagggggagaagcaatgctctgactgaaagtgggcgcccggccttcagctgtctgcttctgacagggaggcgcctgctct
cttgcgctgcccttccctctcctctctccccagatgtggtgacagactttgacttctctccctttgaccagcagctgctg
gccactggatcagcggacaaagctgtaagtgcagcccccattgcccagcttccccccaaggtccctctccctgcaagagg
ggctgctgtgagaactgggatgggtgcagagggaaagagcgatggcaccgttaactgagagctttgcccctcgcccacag
ccctgcctgcccccgagggagccctgcatcctctgagtcttgagagcggatgctgagcttctcctggcctcaagtcacca
gctgagtgctgccagtggtctctttcctgcaggtgaaagtgtggcgcctccttgaggccgaccaggacctctccgcttcc
ccccatgtgatgctggggccgcaggggagccaggtggaggtgcttcttttccaccccacagcggatggtgttctggccag
tgcagctgggaaggcagtgaagatttgggatgtggagcagcagcagattcttattggtacgatcctaagtgggctgggag
atgctggggatcccgccggttagccccagtgaaagcggagcagccattcccaggccagcccctcctgccctgtgcttcgt
gctgcccaattctctgccagtctggagcggttccctttgtccatcccaagcaagcaccaaaagctacccctgcatgcctg
gccaggctccccctgggctgtggtcctcccagggaacctgaccaatttctgtagaagcagagctgagatgggggctgtgt
ctttggactcccttcctggaggattcacaggccagcctctttggccactgcccacacaggtagaggctggggcaagatgg
ccagaaagagaggcggcatgggagcctccagtcgggaagaggggccggagcaatggcagtaagaggagaagccaggcagg
cgcaaggaccccagagagcccgttgcctagcaactttatgggccctgcggcggctttctgcccaggcgccgccactccga
tttcagaaggcggaaggagacggggtattttccgggccaaggataggaagggctttgtttaccaagggttgtgctcctct
tagcagcggtaggctgggggtgggggcaactttggaattgctcaggctgctgccttgcagagaaggcgtctggtgcacct
ggagggatcgcagccctccacatgtgcacccttgacccggttcaggggctccggcagtagcccccgctccagggaaggga
gccagcattgtgggttaagtgggaagaaagggcagcaggcggaaaagatccgagtcagagggaaacaacccagaaggagc
tgagcagtacttcagcttgctcagttgtctccatgcaaagtggggttcccttttgcacattgtgcaagcccagttgtggc
ttagtcagtaaattaagattaataattgtggctt

Protein
Protein IDhabu1_s2789_g10006.t1
Definition-
>habu1_s2789_g10006.t1
MSRFRVSRFRHVEAKVARKEELELPEVGGPAGAAAAGNAPSISWLRSRDPIGPSLGPPMVREDGLGLISPAEKASEEPL
Protein IDhabu1_s2789_g10006.t2
Definition-
>habu1_s2789_g10006.t2
MSRFRVSRFRHVEAKVARKEVGGRQRESCLPPDRLPGEPPYPPAGARAAARAGALPCVARGPSGGSDRLSPRPLSATPRR
GKPAFPEAPPDCRAEPRSHGRLPPA

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Okinawa Institute of Science and Technology
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