Gene
| Gene Model ID | habu1_s2789_g10007 |
|---|---|
| Locus | habu1_scaffold2789 : 822799 ... 828291 : + |
| To GenomeBrowser | habu1_scaffold2789:822799..828291 |
| Genes list of scaffold | habu1_scaffold2789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g10007.t1 | 1 | 1 | WD40 | 5 | 32 | 2.3e-10 | 39.9 | 4.1e-10 | 3.1e-06 | 26.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g10007.t1 | gi|602660642|ref|XP_007435983.1| | PREDICTED: coronin-7 [Python bivittatus] | 2.0e-37 |
| habu1_s2789_g10007.t1 | gi|564241965|ref|XP_006277790.1| | PREDICTED: coronin-7, partial [Alligator mississippiensis] | 3.0e-31 |
| habu1_s2789_g10007.t1 | gi|530638847|ref|XP_005306224.1| | PREDICTED: coronin-7 [Chrysemys picta bellii] | 2.0e-29 |
| habu1_s2789_g10007.t1 | gi|696962270|ref|XP_009569319.1| | PREDICTED: LOW QUALITY PROTEIN: coronin-7-like [Cuculus canorus] | 3.0e-29 |
| habu1_s2789_g10007.t1 | gi|591359142|ref|XP_007054552.1| | PREDICTED: coronin-7 [Chelonia mydas] | 1.0e-28 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.1 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.1 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.1 |
| Small intestine | 0.1 |
| Large intestine | 0.2 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s2789_g10007.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10007.t1 atcacatctgccacctttacagaggtcacaggccccctcggtctgggcctgagcccagaagtcccagacaggaaccaagg gcaggctctgcgatgaccctttggctgcagaagagaagagaaaagcagtgactatcaccctccagttccaatcctccctg tcccgtcctgtccccagcatgctgggaggcaatgtggtgacagactttgacttctctccctttgaccagcagctgctggc cactggatcagcggacaaagctgtgaaagtgtggcgcctccttgaggccgaccaggacctctccgcttccccccatgtga tgctggggccgcaggggagccaggtggaggtgcttcttttccaccccacagcggatggtgttctggccagtgcagctggg aaggcagtgaagatttgggatgtggagcagcagcagattcttattggtacgatcctaagtgggctgggagatgctgggga tcccgccggttagccccagtgaaagcggagcagccattcccaggccagcccctcctgccctgtgcttcgtgctgcccaat tctctgccagtctggagcggttccctttgtccatcccaagcaagcaccaaaagctacccctgcatgcctggccaggctcc ccctgggctgtggtcctcccagggaacctgaccaatttctgtagaagcagagctgagatgggggctgtgtctttggactc ccttcctggaggattcacaggccagcctctttggccactgcccacacaggtagaggctggggcaagatggccagaaagag aggcggcatgggagcctccagtcgggaagaggggccggagcaatggcagtaagaggagaagccaggcaggcgcaaggacc ccagagagcccgttgcctagcaactttatgggccctgcggcggctttctgcccaggcgccgccactccgatttcagaagg cggaaggagacggggtattttccgggccaaggataggaagggctttgtttaccaagggttgtgctcctcttagcagcggt aggctgggggtgggggcaactttggaattgctcaggctgctgccttgcagagaaggcgtctggtgcacctggagggatcg cagccctccacatgtgcacccttgacccggttcaggggctccggcagtagcccccgctccagggaagggagccagcattg tgggttaagtgggaagaaagggcagcaggcggaaaagatccgagtcagagggaaacaacccagaaggagctgagcagtac ttcagcttgctcagttgtctccatgcaaagtggggttcccttttgcacattgtgcaagcccagttgtggcttagtcagta aattaagattaataattgtggcttggagagacccagggtggagggaaggcccttccctggaatgcagcatcagcccccca tcgtaccagggaagctacctctcagctgctctgccacggtaggcagtcctcactggtctgagttggggagccccccgact caacatctggggggtccaagcagatgcctggcgggtctcggagggcagcacccagaaatcaggcaggtaaacggacaact agccagttaactttcaagcacagctatggacggattctgcctctcctgccctgcttttgggggtcaagaatggtgggaaa tctaagcaggttgatgtggctgcgacaccaggcctgttttgttcttccctccagagctggagcctcacctgaaccaggtg cagaatttggcctggaagccggacggatcgctcctgggcacttcttgccgggacaaaacgctgcacatctttgacccacg ggccaaaccagtggcctgccaggtagagtatctggagggttgggggtgccaagggtgggagggcagagggcccacctggg acaagctccacacagctgatgccatccaggcccacctaatgcacagagacccacctggttattctcaggaggaggaagtg ggaagcctggtctgtgaagcagctccacggataaatgggtgccaaggggaacccatgtcctggaggtctgggctcagctc ccgggttgcaagaggaaggtttgggggctgcttcccagagctgggaatgggactgcttggaaatgggagcacacaagcac cccctgaggtccaactggggccccctttgtagccttgcaggcagactcttcctgattctgaattctcaaggaggccatgg gaagccaggaatgagccagcctgcattcagggaccctatttacagcaccactctgcgctgggcagaggagcgtcagagac tcccctcccggtgcatcctcccccacacacacaaacgctgcacatctgggaaagtggcacaggggcagagaagccacaac agaggagatggctggagctctgctctgctcggaggtcattgcacccctccaccctcctcctgcatgcccagggacccttc tgtgagcagggctgctctggcaggagccccaggggaagaaggggtcactggaggctctgtagccaagaggcacgggggtg tctcgagctttgggcttcaggctgctgcgagttgagagggaggaggctcccctgagttggctaagcagcatggggggggg gagggggctgaagtcagaggaagctgtggccgaccagaaggcgttgctggccgggagtcacaaaccgctgagctccaggc taactgtgagtcgagcagccgatgatcttcttcaggaggcaggttggaggggctgctccccctctccgtaccgtgctgac gtggctgccttccttttgtctggaagttaccacttcccgcctgtttccccatgaaatggagggacttgcctgcgtcatct ctgctgtcagtctcagagctttcctgggggatggttcagtcagtgcaggagagcagcgggggcggaagggggcagaaacg gggggggggaggctctgcttcttccaagcagcagaatgtctgcttcctccctcctgctttgctccgtggttgagggcggt gggatagatggggagagtctgcctgtctgttcttcctgggtaggagggtctgacgtggctgtattgggccatgggcattg tgccatcttgacagtagcctttcgatcctccgagagggcgtctggagcctctgcccctcccagcatggcctgcatgaaag gtctggtctagggctaggtcctgggtctgcccccagcaaatgagggtggcacctttcctccactagctttggccaggaag gacaggggctggaaaggagggagttggagggcacagctgggctggtggccccaaaggacagattgtgatccctgcagctg ggagagaagaggctgcccttttcaagcattggcaccccaaagggctctgctcagatcagcagtggccgcctgggccttcc tccgcctagacagggcccccaaaatgctgctcttgcctcctgcgtgcagtttgtccccaaacctcaacctcccagctgtc agcagagcaccccacaaatctcctatgggctcgaaagcagctccccccccccaagtgcatcgcagtccttaatctgggca gaacctgaccgaccctccaaccatctgaggccaaggtcctttttatgtcccccagtgggctgtgcagatgaagggtgttc cctacagccctctggccacgcaacgtctttgggctgggaacatcagaccaaggtcacctcagcaactaagagttgcagct gaccactaaggaggcacccccatgcccacttcctttcacacaaattctgcccaagatccagcagtctggaaaagccacaa tgcaatgccagcccaaggagtcaggagcctttgggggcactgccccagattggtgccctccctgagttcagactggttgg aggcaccaatttgaagggactcacttggggggatgtcccatcccaagggtctcctctgcctctcccagttgggggtggtg tcaccttcctagtaggaatctggaaggtagccccccccccagcccttcatcttctccccccagactgtcctggcacacac gggcggcaaggaggcccagctgctctgggtgaacgcagaaggcttcttcctctccgtgggctccaaccaggtggggattc tctctgcctctgctggggggcttgggtgggggtgtggcaaatcctttccggcaggctgggagcccttgctctgcatcctc ctgagaggacgtctccccaccacatcctgcaagggttctggggtccctctgaggcagcccctcagccttgcctcccttcc agatgatggaacgggaagtctgcctctgggacagccgccggttgagcagctccctggcctctgtcacgctggacgcctct cccaggtaagggggcgcggcaactcccagcattaggggtgca |
|
Protein
| Protein ID | habu1_s2789_g10007.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10007.t1 MLGGNVVTDFDFSPFDQQLLATGSADKAVKVWRLLEADQDLSASPHVMLGPQGSQVEVLLFHPTADGVLASAAGKAVKIW DVEQQQILIGTILSGLGDAGDPAG |
|