Gene
| Gene Model ID | habu1_s2789_g10008 |
|---|---|
| Locus | habu1_scaffold2789 : 824582 ... 838558 : - |
| To GenomeBrowser | habu1_scaffold2789:824582..838558 |
| Genes list of scaffold | habu1_scaffold2789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g10008.t1 | 4 | 1 | LRR_4 | 54 | 89 | 8.9e-24 | 82.6 | 1.9e-07 | 0.00035 | 20.1 |
| habu1_s2789_g10008.t1 | 1 | 1 | LRR_5 | 57 | 155 | 2.2e-08 | 33.8 | 3.7e-08 | 6.8e-05 | 22.5 |
| habu1_s2789_g10008.t1 | 5 | 1 | LRR_8 | 59 | 109 | 3.3e-37 | 126.0 | 4.5e-14 | 8.3e-11 | 41.4 |
| habu1_s2789_g10008.t1 | 5 | 2 | LRR_8 | 97 | 157 | 3.3e-37 | 126.0 | 3.0e-16 | 5.6e-13 | 48.4 |
| habu1_s2789_g10008.t1 | 4 | 2 | LRR_4 | 98 | 134 | 8.9e-24 | 82.6 | 2.0e-07 | 0.00036 | 20.0 |
| habu1_s2789_g10008.t1 | 4 | 3 | LRR_4 | 145 | 182 | 8.9e-24 | 82.6 | 2.3e-06 | 0.0043 | 16.6 |
| habu1_s2789_g10008.t1 | 5 | 3 | LRR_8 | 168 | 225 | 3.3e-37 | 126.0 | 2.4e-10 | 4.5e-07 | 29.5 |
| habu1_s2789_g10008.t1 | 5 | 4 | LRR_8 | 190 | 248 | 3.3e-37 | 126.0 | 5.3e-10 | 9.7e-07 | 28.4 |
| habu1_s2789_g10008.t1 | 4 | 4 | LRR_4 | 214 | 251 | 8.9e-24 | 82.6 | 1.6e-09 | 2.9e-06 | 26.7 |
| habu1_s2789_g10008.t1 | 5 | 5 | LRR_8 | 236 | 295 | 3.3e-37 | 126.0 | 2.1e-11 | 3.9e-08 | 32.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g10008.t1 | gi|602660626|ref|XP_007435975.1| | PREDICTED: vasorin [Python bivittatus] | 0.0 |
| habu1_s2789_g10008.t1 | gi|557327337|ref|XP_006036630.1| | PREDICTED: vasorin [Alligator sinensis] | 0.0 |
| habu1_s2789_g10008.t1 | gi|591359082|ref|XP_007054522.1| | PREDICTED: vasorin [Chelonia mydas] | 0.0 |
| habu1_s2789_g10008.t1 | gi|564235770|ref|XP_006274800.1| | PREDICTED: vasorin [Alligator mississippiensis] | 0.0 |
| habu1_s2789_g10008.t1 | gi|530638844|ref|XP_005306223.1| | PREDICTED: vasorin [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.8 |
| Venom grand-1 | 0.6 |
| Pit, infrared sensing | 2.6 |
| Nose | 1.0 |
| Brain-1 | 1.2 |
| Eye | 1.3 |
| fetal fibroblast | 12.8 |
| venom gland-2 | 2.1 |
| Brain-2 | 1.0 |
| Spleen | 0.7 |
| Lung | 2.3 |
| Liver | 3.4 |
| Kidney | 2.0 |
| Pancreas | 2.1 |
| Small intestine | 3.8 |
| Large intestine | 1.0 |
| Stomach | 1.5 |
| heart | 0.4 |
| ovary | 0.4 |
| cheek muscle | 0.9 |
Transcript
| Transcript ID | habu1_s2789_g10008.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10008.t1 ccgcgcgctagcagcaccccggccctgcctcgaggagcccggtcgaagctccaccatgaggctgcccctgatctgggcac tgctgcttctcccagctggaagccttgcccagggctgcccagctgactgccagtgcaaccagcctcagaccgtcttctgc atcgccaggaggagccctgctgtcccgcagggtttgccactagacacggcccacctgtacatgtttgagagtggcctccg ctcactgagtgaggacagctttgcagggctgcctgctctgcggctcttggacctctcccagaacctaatatctagcctgc cacgcaacgtcttccagccactgccaggactccacaatctcgacctgtcttccaaccagctgcaagaggtcaccaatgag agcttccacggactgcgcctgctggagcggctctacctggactgcaatcagctccagatcattcacccagctgcctttga ctcgctggaaaacctcctggaactgaagctccaggacaaccaactgcagacagtgccaccgctcaacttgcccaccctct tgctgctggacatcagccggaacaagatcacggctctcgagacaggcaccttccacgtccggagcctcgagtccctgaag atggctggtctgggcctgggcagtgtggatgaggagctcctgcagagcctgcgtaacctccatgaactggatgtctcgga caacctgctggccagggtgcccggggtcctgagccagctgcctggactaaccaagctcagcctggcagggaacggcctga tctcgcagctgcggacagaggacttccagcagctccagcaactccaggaactggatatcagcaacctcagcctcaacagc ctcccctgggacttctttgcctccttccccaggctcagggcagtcacagcagcggagaaccctttcaactgtctctgcca catgagctggatcgtcagttgggtgaggctcagcaaagcctcactccggaggccagaagagacccgctgccacttccccc ccaaaaatgcaggccgactgctccggcagatggaatacgcagactttggctgcccgactaccaccaccagcaccagcacc ctacgagcaaccagccccaaactcaccagcccccttcccagcagcaggccccttcccccagaggccagccctgccggccc caccagcagcgatggcggcctcacgtcctctgcctccctcaccccggagggccagccgagccccgaaccccagctctgcc caccgcatacctgtcttaatgggggcctgtgccagccaggccccaaccatcacccggagtgcctctgccccttgggcttc actggcctgtactgtgaggtggtcagggagcaggtgacctctccaccagagcccactcaggccaagcaaatagccatcaa gcatgtggggagcacttccgtcaaagtgggcctgcagaactacattcgctccaagactcagctcaaggggatccgcctga cctactggagtctctcggggccagacaagcggcccatcaccctcagcctgccagccgccttgcctgaatacacagtgcgg gccctgaagcccaactcctcatatcacatctgcgttggggccctgggtgacaagaccgcacaggaggagctctgcgtgga ggcccacacgctgcacccgagccaccaacagcacgcccccgtctcccagagcaaaggccctgacctgcccatagtggtgg caccttctgtagcagctgtgctgctcctgctgggggtggcggccgctggcttctactatgtgcgacagcacagacggcag aggaaggcccaggctgcccctggggcccccagctccggtccgttggaactggagggggtggcgatgtgtggcgagaaggg ggagctggtcacgcaaaatcccaggactgtggtgcccctcagcctggagtccctggggccttccactgtgcccagcggcc tccgggccagtccagctgaacgcctgcctgacccatccctgcctctctccccccttttggcttctgcacccctaatgctg ggagttgccgcgcccccttacctgggagaggcgtccagcgtgacagaggccagggagctgctcaaccggcggctgtccca gaggcagacttcccgttccatcatctggaagggaggcaaggctgaggggctgcctcagagggaccccagaacccttgcag gatgtggtggggagacgtcctctcaggaggatgcagagcaagggctcccagcctgccggaaaggatttgccacaccccca cccaagccccccagcagaggcagagagaatccccacctggttggagcccacggagaggaagaagccttctgcgttcaccc agagcagctgggcctccttgccgcccgtgtgtgccaggacagtctggggggagaagatgaagggctggggggggggctac cttccagattcctactaggaaggtgacaccacccccaactgggagaggcagaggagacccttgggatgggacatcccccc aagtgagtcccttcaaattggtgcctccaaccagtctgaactcagggagggcaccaatctggggcagtgcccccaaaggc tcctgactccttgggctggcattgcattgtggcttttccagactgctggatcttgggcagaatttgtgtgaaaggaagtg ggcatgggggtgcctccttagtggtcagctgcaactcttagttgctgaggtgaccttggtctgatgttcccagcccaaag acgttgcgtggccagagggctgtagggaacacccttcatctgcacagcccactgggggacataaaaaggaccttggcctc agatggttggagggtcggtcaggttctgcccagattaaggactgcgatgcacttggggggggggagctgctttcgagccc ataggagatttgtggggtgctctgctgacagctgggaggttgaggtttggggacaaactgcacgcaggaggcaagagcag cattttgggggccctgtctaggcggaggaaggcccaggcggccactgctgatctgagcagagccctttggggtgccaatg cttgaaaagggcagcctcttctctcccagctgcagggatcacaatctgtcctttggggccaccagcccagctgtgccctc caactccctcctttccagcccctgtccttcctggccaaagctagtggaggaaaggtgccaccctcatttgctgggggcag acccaggacctagccctagaccagacctttcatgcaggccatgctgggaggggcagaggctccagacgccctctcggagg atcgaaaggctactgtcaagatggcacaatgcccatggcccaatacagccacgtcagaccctcctacccaggaagaacag acaggcagactctccccatctatcccaccgccctcaaccacggagcaaagcaggagggaggaagcagacattctgctgct tggaagaagcagagcctccccccccccgtttctgcccccttccgcccccgctgctctcctgcactgactgaaccatcccc caggaaagctctgagactgacagcagagatgacgcaggcaagtccctccatttcatggggaaacaggcgggaagtggtaa cttccagacaaaaggaaggcagccacgtcagcacggtacggagagggggagcagcccctccaacctgcctcctgaagaag atcatcggctgctcgactcacagttagcctggagctcagcggtttgtgactcccggccagcaacgccttctggtcggcca cagcttcctctgacttcagccccctccccccccccatgctgcttagccaactcaggggagcctcctccctctcaactcgc agcagcctgaagcccaaagctcgagacacccccgtgcctcttggctacagagcctccagtgaccccttcttcccctgggg ctcctgccagagcagccctgctcacagaagggtccctgggcatgcaggaggagggtggaggggtgcaatgacctccgagc agagcagagctccagccatctcctctgttgtggcttctctgcccctgtgccactttcccagatgtgcagcgtttgtgtgt gtgggggaggatgcaccgggaggggagtctctgacgctcctctgcccagcgcagagtggtgctgtaaatagggtccctga atgcaggctggctcattcctggcttcccatggcctccttgagaattcagaatcaggaagagtctgcctgcaaggctacaa agggggccccagttggacctcagggggtgcttgtgtgctcccatttccaagcagtcccattcccagctctgggaagcagc ccccaaaccttcctcttgcaacccgggagctgagcccagacctccaggacatgggttccccttggcacccatttatccgt ggagctgcttcacagaccaggcttcccacttcctcctcctgagaataaccaggtgggtctctgtgcattaggtgggcctg gatggcatcagctgtgtggagcttgtcccaggtgggccctctgccctcccacccttggcacccccaaccctccagatact ctacctggcaggccactggtttggcccgtgggtcaaagatgtgcagcgttttgtcctgcagagcaaagggagcccaagtg gtcatcagctcatccttccactctgggccaaccccagaaccccctcccaaccctggacatgttcagccaggccagaagat gtgggaaggggagcttatccctgatgttgctgccagtaggaaaggggaggggggtcaggcagctgtgcaagtgcctcctg atgccctggctttgaggaagtgtccagttctggcctgcccatggggggcgggaagtgtcccagattgtcgtagcatcccc taccaggccaggtccccacaaggctgggatgcactttctccttgagacccttccccttcttggtttgggatggggatggg cctggggtgcccccaaggacacaccacgctccttcagggacgcaagcatggggaaagaacgttcctttccaagcaggcgc ccccagggcctcccccctcatgtaaagaggaagagaatgcagcacaagaagcactctgaggctccactagatggcagtca agggcaagtggctctcatcgccagggcgccaacaccaaggcatggagtacatcgccccctagtgtccacctgcagactga aaaactcaagagccagctccttgatttggcagggggcccttctgaaacgaccctgaacaccctgtgggccctcagcctct gcttccccacagcactcacccggcaagaagtgcccaggagcgatccgtccggcttccaggccaaattctgcacctggttc aggtgaggctccagctctggagggaagaacaaaacaggcctggtgtcgcagccacatcaacctgcttagatttcccacca ttcttgacccccaaaagcagggcaggagaggcagaatccgtccatagctgtgcttgaaagttaactggctagttgtccgt ttacctgcctgatttctgggtgctgccctccgagacccgccaggcatctgcttggaccccccagatgttgagtcgggggg ctccccaactcagaccagtgaggactgcctaccgtggcagagcagctgagaggtagcttccctggtacgatggggggctg atgctgcattccag |
|
Protein
| Protein ID | habu1_s2789_g10008.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10008.t1 MRLPLIWALLLLPAGSLAQGCPADCQCNQPQTVFCIARRSPAVPQGLPLDTAHLYMFESGLRSLSEDSFAGLPALRLLDL SQNLISSLPRNVFQPLPGLHNLDLSSNQLQEVTNESFHGLRLLERLYLDCNQLQIIHPAAFDSLENLLELKLQDNQLQTV PPLNLPTLLLLDISRNKITALETGTFHVRSLESLKMAGLGLGSVDEELLQSLRNLHELDVSDNLLARVPGVLSQLPGLTK LSLAGNGLISQLRTEDFQQLQQLQELDISNLSLNSLPWDFFASFPRLRAVTAAENPFNCLCHMSWIVSWVRLSKASLRRP EETRCHFPPKNAGRLLRQMEYADFGCPTTTTSTSTLRATSPKLTSPLPSSRPLPPEASPAGPTSSDGGLTSSASLTPEGQ PSPEPQLCPPHTCLNGGLCQPGPNHHPECLCPLGFTGLYCEVVREQVTSPPEPTQAKQIAIKHVGSTSVKVGLQNYIRSK TQLKGIRLTYWSLSGPDKRPITLSLPAALPEYTVRALKPNSSYHICVGALGDKTAQEELCVEAHTLHPSHQQHAPVSQSK GPDLPIVVAPSVAAVLLLLGVAAAGFYYVRQHRRQRKAQAAPGAPSSGPLELEGVAMCGEKGELVTQNPRTVVPLSLESL GPSTVPSGLRASPAERLPDPSLPLSPLLASAPLMLGVAAPPYLGEASSVTEARELLNRRLSQRQTSRSIIWKGGKAEGLP QRDPRTLAGCGGETSSQEDAEQGLPACRKGFATPPPKPPSRGRENPHLVGAHGEEEAFCVHPEQLGLLAARVCQDSLGGE DEGLGGGLPSRFLLGR |
|