Gene
| Gene Model ID | habu1_s2789_g10009 |
|---|---|
| Locus | habu1_scaffold2789 : 839829 ... 842221 : + |
| To GenomeBrowser | habu1_scaffold2789:839829..842221 |
| Genes list of scaffold | habu1_scaffold2789 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| coronin- partial | GO:0005794 GO:0016021 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g10009.t1 | gi|564235776|ref|XP_006274803.1| | PREDICTED: coronin-7-like [Alligator mississippiensis] | 3.0e-23 |
| habu1_s2789_g10009.t1 | gi|527244673|ref|XP_005140680.1| | PREDICTED: LOW QUALITY PROTEIN: coronin-7, partial [Melopsittacus undulatus] | 3.0e-23 |
| habu1_s2789_g10009.t1 | gi|637367675|ref|XP_008121438.1| | PREDICTED: coronin-7-like [Anolis carolinensis] | 3.0e-23 |
| habu1_s2789_g10009.t1 | gi|557327342|ref|XP_006036632.1| | PREDICTED: coronin-7-like [Alligator sinensis] | 4.0e-23 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.8 |
| Venom grand-1 | 1.8 |
| Pit, infrared sensing | 0.6 |
| Nose | 0.7 |
| Brain-1 | 0.4 |
| Eye | 0.6 |
| fetal fibroblast | 1.1 |
| venom gland-2 | 2.0 |
| Brain-2 | 0.6 |
| Spleen | 1.6 |
| Lung | 2.1 |
| Liver | 2.0 |
| Kidney | 0.7 |
| Pancreas | 4.4 |
| Small intestine | 2.4 |
| Large intestine | 1.1 |
| Stomach | 2.2 |
| heart | 0.5 |
| ovary | 0.1 |
| cheek muscle | 0.7 |
Transcript
| Transcript ID | habu1_s2789_g10009.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10009.t1 tcgcaggcctctgatcccgctctttgatcccagcaccggccttcttgtcctggcagggaagggagagaaggtgcttttct gttatgaggtgcagcctgcccagttggccatgacagaagctcaccagtgctttctggagacacggacccaaggggtggcc cagctgcccaggctggccctggatgtcacagcctgcgaagtgatgaaggttttgcagctgagcgactcagctgttgtgcc catcagctacctggtgcccagaaaggtaaaccagccaagctgcccgcatgggaggaggcggggcccctggctccggtggg ccttattcaccccggcctgtcttgcagtccacacaggagtttcacaaagacttgtttccagattgtcctggaaatgtccc ggcagcatctgctcaggcctggtgggctggggacaacacgcaggtaaggaggagggctgatctctccccagttgatggcc cccaagattttccccagccaccctggactcaacaagggcttggcttggtggtggcttcttgaactgagggccatcaaagc cgcaggcctgccccaaggaagactcatggccactgatggcctctcctgcccagaggccttctccagggaaagaatgctct ggtccgtgacattccagtcctggccagcattgacccatgctcattgtcttgccccatagcagcaccctcctggcccttgg ctactctggcaggtagtaaactttccctctttcttgcttcaggtggagacggtaagccttgatcctgcccacaggcccag ccccggcttcctctctgcctgcctgcctcacctcgaccaagacaaccggcacccaccctccacccacatggaggcagggg atcaggccaaggatctggagatcagtgtgagtggctgtggctgacagggcacctggtagctttgcccactttccagggtg cacttgtcccagcttcctctgagcagggatgatctgggcctgcctccattcctcggtgtactggcctccagcctgcttgc aaccggctgatgcacagtgttgctttttgccaggtggacagcagcctgtcctctcctggcagctgtctgacatctccctc cagtgctgccccatctctctctgccaccagcggcttttcctccagcccaagccagcggtccctgcagaatattctgggta aggctctgtggaccagggacaccggcggccccctcagcatccaagaatgcccgggctgccttacagccgcgccccagccc cgctcatcccatgcctttctcttcaggcccgagttctgccttcaggcacatcgagggtgtcatcttacctcgcagcaccc acatcaccaacctgcgtggcttgagcctcactacaccaggggagtgtgacggcttttgtgccaaccggcatcacatcgcc atcccactgcttgccaccggtggacaggtggccattttggaggtgaaacaccatccccaccccaaggcagggttcagtgg ggtgtcttcctctgtcttgcgaacgataaggaggaccggctgagggttaacaaatggcttccttccttgtctcctgcagc tctcgcagccagggcgactccctgacacccccatgcccaccatccagaatggggcacctgtctcggatctctgctgggat ccctttgatgagcaacgcctggccatcggtagggaccagggggtcttgcagtgagcctctctcctgggccgtgcacccag ccttttgggccggctgagccctgccacagggctgcaccccatcacgatggtctttgcagctcttccttccttccctctct ggtgcagctggtgaagacaccaagattcggctgtggcgggttgagccaaccgggctgcagaagcagctgctggagccaga agtggttttgagaggtcaggaccccctgtccctccgccccattctccttgtggctggccgaggcaagatcggctagggga gcctagcgctgctctgaatgcagcctctccccttttcacgccaggtcacacagagaagatctactccgtcaagttccacc ctctggcctccgatattctggcctcctcctcctatgacaagagtgtccggatctgggatgtgcgcacgggaaggcaggag cttggacttcacggccacattgaccaggtagggagca |
|
Protein
| Protein ID | habu1_s2789_g10009.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10009.t1 MPFSSGPSSAFRHIEGVILPRSTHITNLRGLSLTTPGECDGFCANRHHIAIPLLATGGQVAILEVKHHPHPKAGFSGVSS SVLRTIRRTG |
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