Gene
| Gene Model ID | habu1_s2789_g10012 |
|---|---|
| Locus | habu1_scaffold2789 : 848673 ... 854578 : - |
| To GenomeBrowser | habu1_scaffold2789:848673..854578 |
| Genes list of scaffold | habu1_scaffold2789 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g10012.t1 | 2 | 1 | zf-H2C2_2 | 223 | 245 | 7.6e-14 | 51.2 | 2.4e-11 | 4.5e-08 | 32.9 |
| habu1_s2789_g10012.t1 | 2 | 1 | zf-C2H2 | 234 | 256 | 4.7e-11 | 42.3 | 3.4e-08 | 6.2e-05 | 23.0 |
| habu1_s2789_g10012.t1 | 2 | 2 | zf-H2C2_2 | 248 | 275 | 7.6e-14 | 51.2 | 5.8e-10 | 1.1e-06 | 28.6 |
| habu1_s2789_g10012.t1 | 2 | 2 | zf-C2H2 | 292 | 316 | 4.7e-11 | 42.3 | 2.3e-06 | 0.0042 | 17.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g10012.t1 | gi|602660630|ref|XP_007435977.1| | PREDICTED: zinc finger protein GLIS2 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s2789_g10012.t1 | gi|602660628|ref|XP_007435976.1| | PREDICTED: zinc finger protein GLIS2 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s2789_g10012.t1 | gi|602660632|ref|XP_007435978.1| | PREDICTED: zinc finger protein GLIS2 isoform X3 [Python bivittatus] | 0.0 |
| habu1_s2789_g10012.t1 | gi|557327344|ref|XP_006036633.1| | PREDICTED: zinc finger protein GLIS2 [Alligator sinensis] | 0.0 |
| habu1_s2789_g10012.t1 | gi|564235772|ref|XP_006274801.1| | PREDICTED: zinc finger protein GLIS2 isoform X1 [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 8.0 |
| Venom grand-1 | 8.6 |
| Pit, infrared sensing | 9.4 |
| Nose | 4.9 |
| Brain-1 | 3.3 |
| Eye | 5.2 |
| fetal fibroblast | 8.6 |
| venom gland-2 | 10.8 |
| Brain-2 | 4.4 |
| Spleen | 6.1 |
| Lung | 8.8 |
| Liver | 4.4 |
| Kidney | 5.9 |
| Pancreas | 11.3 |
| Small intestine | 7.7 |
| Large intestine | 5.3 |
| Stomach | 6.6 |
| heart | 4.8 |
| ovary | 14.1 |
| cheek muscle | 9.1 |
Transcript
| Transcript ID | habu1_s2789_g10012.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10012.t1 ccggcctgcgccatccgggtcggggcggtggaagcccccccacagtccagtccagctgactagagcagcctgctccctcg ctgctggccccccatgcattccctggacgagcccctggacctcaagctgagtgtctccaaactgccggccgtgcgagaga agcgtgactggaccccgagcagcaccaagggccgagctctgtgcccgctctcacaggacaagggctacctggcagtgggc ccaggctcccctccggatggcttccagccacacccccaatgccaagacaagagagaccatcggttctcgcctcccactgt tgacctgagcctgtccccttctccgccaggccgggactccacccccagcggcagcacatccacctcccccgacaggcaga gcaatggggagctggtgaactgcaccagcttgcgtgatctgcaatccctgcgctaccttgacagcctccgcagctccttc cagttcttcctacctctgaactcaggagggtccctgcacctgcctgcctccgctttcctggcgccctccaaggagaagcg gctctctttggatgcggctgtgcagaagcagctggtgtgccgctggtcgaagtgcaaccagctgtttgatctcctgcaag accttgtggaccatgtcaatgactttcatgtgaagccagagaaggatgctggctatcgttgccactgggagggttgtgcc cgccatggacggggcttcaatgccaggtacaaaatgctgatccacatccgtacgcacaccaatgagaagccccatcgctg ccccacctgcaacaagagcttctcccggctagaaaacctgaagatccacaaccgctcccacacaggggagaagccctatc tctgcccctatgaaggctgcagcaagcgctactccaactccagcgaccgcttcaagcacacccgcacccactatgtggac aagccctaccactgcaagatgcccgggtgccacaagcgctacaccgaccccagctctctccgcaagcatatcaaggccca tgggcacttcatcacccgcgagcagcaggagctgctgaagctgcagctccccaccaagcccccctccctcatggccgaca ggccgtacctcggcggggcacagatcatcgtgcctaccccggccgccctctttggcagccacagcctgcctctcccgctc ccccaggcccccctggatctcagcaccttaacctgcggtgggctgggtacagctgccatcgcgggcctgcccagccccac acttgcccctttgaacttggccaagaaccccctgctggcctcccctttctcagtgggcagcctggggctgccggtgatgt ccttgctggccggcacctctgccaaggcaggtgttgagcgagggcaggaaagcagggcctggcccatcaaaggggacttt ggcagcagcagccagtcagcagggttgcagcgatgcaaggaggccagtgagagagtgaaactggccaggctgcggacaac cacggacagcctctcgctgctccctgggggcgtcctggacctgtccactggcatgaactccggggcaaccgctgaagctc tgccaccaggctgggtggtaatcccagctggctccgttttgctgaaggaagctgtggtgagttaagtagggaagagcaaa gaggaggactggaaggggacaccatcttgcccagagactttccagcattcaatccaagcaagtgatacaagactccttgt gacgaagacctgctgagctgctcctgggaatcaggaaagttctgttctctccccaccccatttgttcctccctctccaca tggctactggggcttttcacaaggggggggcatctcttctgagcaaagcaataagaagcttcctagtgcagcagccagga attccgccctcccctctccctgttctgcctaatgccaggcaggacagacacaggagcaccaatgcaggaagcagcactgg ttggttcattcccagcaagaactcctcaacctggccccccttttctcagtcctgctttagctcaaaaaaacctgggggag cccacttgaaggaatcttgcccaaagctgctgtcttctttttgtcacccctttggtggtggcagccacactgcaggcctt gctgtgcccagtttgctcccatctacctttggggtgcttcctttgtcccccaatttttctttggagactagcagtgccac cctgtggctcagaggccttttcctccccccatttggctactgttcagaagccaatcctggaagaggtgctatcagttgcc tccctcctgggcccagggcttctgcctggttcaggcctctatgacaaggcacaccattgtgtgtgctgctgatgagacca ttccctgacgtggaggaattgaactgtgcaattccccctataagcagtttcttatattaaagctgtgcaacagtcttaca gaggcagtgaggatgggaagacagcaaaccatccctggatgaagattcagtctatgctgggtcctgggctgcttctgccc tgtaaaccttgcaagagccccttcttctcatggggggaggggtactccctcccttgcttttaggaaagcagagcaccagg caatctggcaccctttatgcagatccgaggaaagatggtgtgcaacactttcagcaggaagccatgaacttgtcaaagac tggccaggagatagctggggtctggggagggtaacacaccataaaaacaggccctgccaccagctgtagtagcttcaaga gcccagcagagaagcagcattcgctctgcactcctccccctcctcctggaacagcccagatcacctcttgactgccctcc ttgtattggtgggtcactccatgtttccattcgcgttcttagaaagggcatctctgggtatcccctgtatttcccccccc cagggaactccccttcgaagggcctgcaacaatgccatctttacaccacccttgcgcagcccctgcagatgattcctggc acaccttcaatggtctacatagtgccaaggatccagaaccacctgggcaggggagctggcctcccaagcacacacatgcc tgctgtggggcccccactcacaaagcatcctgctgggcaacttggcctcagagctgatgcacgcacggcacaggctgtca gtgttttcctgtttcaaagtgccttttgattgtaggttatgttgggggtgatgccctccccttgcctctgttagtatagt tttaagacaaaaagataagctataacttgacccaccggtcctccagaagagaggatgattatgacaataaagtacacaaa aagccttgctagg |
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Protein
| Protein ID | habu1_s2789_g10012.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10012.t1 MHSLDEPLDLKLSVSKLPAVREKRDWTPSSTKGRALCPLSQDKGYLAVGPGSPPDGFQPHPQCQDKRDHRFSPPTVDLSL SPSPPGRDSTPSGSTSTSPDRQSNGELVNCTSLRDLQSLRYLDSLRSSFQFFLPLNSGGSLHLPASAFLAPSKEKRLSLD AAVQKQLVCRWSKCNQLFDLLQDLVDHVNDFHVKPEKDAGYRCHWEGCARHGRGFNARYKMLIHIRTHTNEKPHRCPTCN KSFSRLENLKIHNRSHTGEKPYLCPYEGCSKRYSNSSDRFKHTRTHYVDKPYHCKMPGCHKRYTDPSSLRKHIKAHGHFI TREQQELLKLQLPTKPPSLMADRPYLGGAQIIVPTPAALFGSHSLPLPLPQAPLDLSTLTCGGLGTAAIAGLPSPTLAPL NLAKNPLLASPFSVGSLGLPVMSLLAGTSAKAGVERGQESRAWPIKGDFGSSSQSAGLQRCKEASERVKLARLRTTTDSL SLLPGGVLDLSTGMNSGATAEALPPGWVVIPAGSVLLKEAVVS |
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