Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2789_g10017
Locus habu1_scaffold2789 : 917531 ... 924088 : -
To GenomeBrowser habu1_scaffold2789:917531..924088
Genes list of scaffold habu1_scaffold2789

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 2.3
Venom grand-1 0.6
Pit, infrared sensing 1.5
Nose 3.1
Brain-1 2.5
Eye 1.7
fetal fibroblast 1.2
venom gland-2 1.4
Brain-2 2.8
Spleen 1.0
Lung 1.2
Liver 0.8
Kidney 2.4
Pancreas 1.2
Small intestine 1.0
Large intestine 1.0
Stomach 0.6
heart 1.2
ovary 0.5
cheek muscle 1.1

Transcript
Transcript IDhabu1_s2789_g10017.t1
Definition-
>habu1_s2789_g10017.t1
gccgcggtaaccacggcaacggcccaacaggcggcggcggcggcgggcctggctcggaggcagcttcgccgcgcctagct
gggcccggcggcccgggagggaacgggagggagcggcaacggttgtcgcggagacccggccgccccgccgcctgcagccc
cgaggtagcggacggggctcggaaggcgctcatcaggcttcgcattgcaggcgcccgtaacccggggccatggtgaccga
cttcgacgagaagcacgacgagcacttggtgctgctgcagcagaggaacaggatcctgaaggccctggagaggaaggacc
ctctgcagctccggctgaagcagctggagcagggcttcactttgtacgtgaacggcgccaactcggaagcgagccgcggc
cgcaaagtcagccctccggccctgctcgggagcggcggcgcgcgaaccgtcagggcgaaccctgtgagtaccaaagacct
tttaaaacaaggagagcagcaagagaggagcatccaaagtgcacctagtaaaatccaacgccgggagtggctccagaaag
ctgtgcagatcaagacagaaactggatctaggctctacattgctcctccttgcgagtattctgaggattttgaatctgat
gaaagtttagatctgcagacaactgactatgaagagaatggtacttcccaggatctccgacaaagcttggagtttgccag
gagccaaaaacaggtgaaaggggaacattcttccgaggattctgactccatcgaggaggaggttcccattgaagcccctg
agaagaaagaacctgcggcatgtctgggaggggctgctgtgccggttcttgccaaagcagctctctctcctctgtctggc
acaggctctgctctggccactgggcctttcgtgttggaattcaagccaaactgcccaggcattaagaaggagcaaagtct
ctctgcaaaaaggaagggcactgctgaaccctacattcccgtcaagtccatgagttcagcggctgcaggtcgtcggtgcc
tggaagagcaggaaggaaccgcctccagtaagagagagatggtttctaagtggcccccttaagagcttgacaggcataca
gaagctgcagtggtgaaaggcagtggaaatgtgcctgtcatttctctcctctgaacaaggccatgctcagaataattctg
tgtgttgacattcatgttagttctctgatgcttgtagcccctggagacctccttggctaggcagaaagctctctctctct
tccgggcagaaagagaggattgtgcctagcatgattctctggattgggatggcaggtttccttagatgtcgatgtcaggc
cttagggtgacagctgcgttttagaacattggtttgagaatatgcctttagccagccaagtgtcctcatttactcaattt
tcttcctgttaattagcattttgatctctactgtttctttcctttgcctgtcactctccttatttttcttggtgcacaaa
tatagttcagcatcaacatcactgaaatatttctttattcattctgtttttcacaccaccttaattcttctttagtaaag
ctgttcccacattcagcctttctacatttgcccactacagcctgttgaacacttacattctccaccttaattcttcttct
actttgaaatattgctgcccagaatcatcaggttttgcttggcccattctgtgagagtaacacaggaggcttcgtatggt
ctttggatgccacaccttctcacttggtgggatcttgttagccttggctggaaccagggaccaactccttctctgaagtc
catttgggctgccactaagttttgctcttgttagtctctatgctgtctaggagtttccactcctatgactcgagaatctt
accacggggatgtttcaggcccaacttgcttccctctgactaagggttcaaaaaactattttctgcttcttttggacgtt
aggaccaataagccgatcagaaagaccactctcagctgttcggaaaaatgtgtgtgagaagaaggatccagcaaatgctg
cttccattgtcctcaaagctatgcaagcagaaaatgagacactacaaaaggagctgctctgtaggcagctggaggtctct
acagaggtcagtagcacgggggacgtgtcttattcaaaaacagccacagcaggtggctgggcatagacttccctgctcca
tctggcctctgctatggaagctgactatttggctactgcacagagggatctgacaggatcaggatgttcttccaaaatgt
tgctttgcaaccatttgccttgaaatggaccatgtgctctgtccaacgttaaataaaggttttcttttccttggcttcct
agaattttttttttcattttaaatagaaactggttttcttaagaagaactatcctgtctcctttttgtagtctattattt
aacattttagaagctgttaggaagagagtagtaacttacaaagaagggaagccctcatgcttgcctggaggtgaggctga
attataaatcttttccattcctgaaaaggaagctcctgtgtgtacaagcaatcaattcttgtgtagccgtggcagaatct
tactaaaaattgaccatgctaatatttgtagaatcgctgtccagactcatctagttgctgattgtggtttgtgaaaggaa
ggacagatagaatattctctgccaagagtccttgagagggacgttgactgcttgaatagggcatgggagttcggcacata
tactgacctcccaattcagaccagtccccagcttcattgtctggagagtgaagttctcttgtgagtttgtccttatttcc
cttctgtgcagtcactgctggcttctggctctgcaacagtggacgttcctccagaacagcaggaggacgcagttatctcc
acagccctggaacaaactggacttctggaaaacaggtggcagttttgaatcctttgagtccattctcaggtgcaatatac
ttctatctctgcatggggatgcccaatggactcctctgctagttctgctctccattgcatctgattactaggacattcag
aaggcaacatgggcacaagtatcttcatctgcaaagggtgtctgtgaaggccgtaggttggggtatgggatggcaaaagg
tgatttggagactgagataggttcttcataaaaatttgagaggtcagtattttcataatgaagtgtgaaccttgtgctgt
gagcaacacaagaaacagcatctcagcttgctggttcttggtttatattcaatattctgcaaacttgcagtagtattctt
tatcaataaaactaatggcatattttctcctt
Transcript IDhabu1_s2789_g10017.t2
Definition-
>habu1_s2789_g10017.t2
gccgcggtaaccacggcaacggcccaacaggcggcggcggcggcgggcctggctcggaggcagcttcgccgcgcctagct
gggcccggcggcccgggagggaacgggagggagcggcaacggttgtcgcggagacccggccgccccgccgcctgcagccc
cgaggtagcggacggggctcggaaggcgctcatcaggcttcgcattgcaggcgcccgtaacccggggccatggtgaccga
cttcgacgagaagcacgacgagcacttggtgctgctgcagcagaggaacaggatcctgaaggccctggagaggaaggacc
ctctgcagctccggctgaagcagctggagcagggcttcactttgtacgtgaacggcgccaactcggaagcgagccgcggc
cgcaaagtcagccctccggccctgctcgggagcggcggcgcgcgaaccgtcagggcgaaccctgtgagtaccaaagacct
tttaaaacaaggagagcagcaagagaggagcatccaaagtgcacctagtaaaatccaacgccgggagtggctccagaaag
ctgtgcagatcaagacagaaactggatctaggctctacattgctcctccttgcgagtattctgaggattttgaatctgat
gaaagtttagatctgcagacaactgactatgaagagaatggtacttcccaggatctccgacaaagcttggagtttgccag
gagccaaaaacaggtgaaaggggaacattcttccgaggattctgactccatcgaggaggaggttcccattgaagcccctg
agaagaaagaacctgcggcatgtctgggaggggctgctgtgccggttcttgccaaagcagctctctctcctctgtctggc
acaggctctgctctggccactgggcctttcgtgttggaattcaagccaaactgcccaggtaggtccacttaaaactgagg
tggagaattactaattttgtttgtcctctttgtgatgaagattagaagtctcttctttaagtatttctttctctttttct
tatttgttcttttcttttttcctttgcactttttattctccctttgttttttgtttttttgagagcttactatatattgt
cttttaccattgttattgactcttcattaaaaagtattttaaaaattgcctggataaatccagtaccgtgctgactgttt
tttattttcagaatcaaagagtgcattggctggcttggccctgaaggaatcctcaaaagaaagggtccttatgtgcccga
taaacaagggcagagattgcctttgagtgtaattctagcccctggtcttaaagacggcctaagaaggctgtgctggatgc
tgactgcctttagaataagttcctggttttggtatctgctcttcctgcaggcattaagaaggagcaaagtctctctgcaa
aaaggaagggcactgctgaaccctacattcccgtcaagtccatgagttcagcggctgcaggtcgtcggtgcctggaagag
caggaaggaaccgcctccagaccaataagccgatcagaaagaccactctcagctgttcggaaaaatgtgtgtgagaagaa
ggatccagcaaatgctgcttccattgtcctcaaagctatgcaagcagaaaatgagacactacaaaaggagctgctctgta
ggcagctggaggtctctacagaggtcagtagcacgggggacgtgtcttattcaaaaacagccacagcaggtggctgggca
tagacttccctgctccatctggcctctgctatggaagctgactatttggctactgcacagagggatctgacaggatcagg
atgttcttccaaaatgttgctttgcaaccatttgccttgaaatggaccatgtgctctgtccaacgttaaataaaggtttt
cttttccttggcttcctagaattttttttttcattttaaatagaaactggttttcttaagaagaactatcctgtctcctt
tttgtagtctattatttaacattttagaagctgttaggaagagagtagtaacttacaaagaagggaagccctcatgcttg
cctggaggtgaggctgaattataaatcttttccattcctgaaaaggaagctcctgtgtgtacaagcaatcaattcttgtg
tagccgtggcagaatcttactaaaaattgaccatgctaatatttgtagaatcgctgtccagactcatctagttgctgatt
gtggtttgtgaaaggaaggacagatagaatattctctgccaagagtccttgagagggacgttgactgcttgaatagggca
tgggagttcggcacatatactgacctcccaattcagaccagtccccagcttcattgtctggagagtgaagttctcttgtg
agtttgtccttatttcccttctgtgcagtcactgctggcttctggctctgcaacagtggacgttcctccagaacagcagg
aggacgcagttatctccacagccctggaacaaactggacttctggaaaacaggtggcagttttgaatcctttgagtccat
tctcaggtgcaatatacttctatctctgcatggggatgcccaatggactcctctgctagttctgctctccattgcatctg
attactaggacattcagaaggcaacatgggcacaagtatcttcatctgcaaagggtgtctgtgaaggccgtaggttgggg
tatgggatggcaaaaggtgatttggagactgagataggttcttcataaaaatttgagaggtcagtattttcataatgaag
tgtgaaccttgtgctgtgagcaacacaagaaacagcatctcagcttgctggttcttggtttatattcaatattctgcaaa
cttgcagtagtattctttatcaataaaactaatggcatattttctcctt
Transcript IDhabu1_s2789_g10017.t3
Definition-
>habu1_s2789_g10017.t3
gccgcggtaaccacggcaacggcccaacaggcggcggcggcggcgggcctggctcggaggcagcttcgccgcgcctagct
gggcccggcggcccgggagggaacgggagggagcggcaacggttgtcgcggagacccggccgccccgccgcctgcagccc
cgaggtagcggacggggctcggaaggcgctcatcaggcttcgcattgcaggcgcccgtaacccggggccatggtgaccga
cttcgacgagaagcacgacgagcacttggtgctgctgcagcagaggaacaggatcctgaaggccctggagaggaaggacc
ctctgcagctccggctgaagcagctggagcagggcttcactttgtacgtgaacggcgccaactcggaagcgagccgcggc
cgcaaagtcagccctccggccctgctcgggagcggcggcgcgcgaaccgtcagggcgaaccctgtgagtaccaaagacct
tttaaaacaaggagagcagcaagagaggagcatccaaagtgcacctagtaaaatccaacgccgggagtggctccagaaag
ctgtgcagatcaagacagaaactggatctaggctctacattgctcctccttgcgagtattctgaggattttgaatctgat
gaaagtttagatctgcagacaactgactatgaagagaatggtacttcccaggatctccgacaaagcttggagtttgccag
gagccaaaaacaggtgaaaggggaacattcttccgaggattctgactccatcgaggaggaggttcccattgaagcccctg
agaagaaagaacctgcggcatgtctgggaggggctgctgtgccggttcttgccaaagcagctctctctcctctgtctggc
acaggctctgctctggccactgggcctttcgtgttggaattcaagccaaactgcccaggtaggtccacttaaaactgagg
tggagaattactaattttgtttgtcctctttgtgatgaagattagaagtctcttctttaagtatttctttctctttttct
tatttgttcttttcttttttcctttgcactttttattctccctttgttttttgtttttttgagagcttactatatattgt
cttttaccattgttattgactcttcattaaaaagtattttaaaaattgcctggataaatccagtaccgtgctgactgttt
tttattttcagaatcaaagagtgcattggctggcttggccctgaaggaatcctcaaaagaaagggtccttatgtgcccga
taaacaagggcagagattgcctttgagtgtaattctagcccctggtcttaaagacggcctaagaaggctgtgctggatgc
tgactgcctttagaataagttcctggttttggtatctgctcttcctgcaggcattaagaaggagcaaagtctctctgcaa
aaaggaagggcactgctgaaccctacattcccgtcaagtccatgagttcagcggctgcaggtcgtcggtgcctggaagag
caggaaggaaccgcctccagtaagagagagatggtttctaagtggcccccttaagagcttgacaggcatacagaagctgc
agtggtgaaaggcagtggaaatgtgcctgtcatttctctcctctgaacaaggccatgctcagaataattctgtgtgttga
cattcatgttagttctctgatgcttgtagcccctggagacctccttggctaggcagaaagctctctctctcttccgggca
gaaagagaggattgtgcctagcatgattctctggattgggatggcaggtttccttagatgtcgatgtcaggccttagggt
gacagctgcgttttagaacattggtttgagaatatgcctttagccagccaagtgtcctcatttactcaattttcttcctg
ttaattagcattttgatctctactgtttctttcctttgcctgtcactctccttatttttcttggtgcacaaatatagttc
agcatcaacatcactgaaatatttctttattcattctgtttttcacaccaccttaattcttctttagtaaagctgttccc
acattcagcctttctacatttgcccactacagcctgttgaacacttacattctccaccttaattcttcttctactttgaa
atattgctgcccagaatcatcaggttttgcttggcccattctgtgagagtaacacaggaggcttcgtatggtctttggat
gccacaccttctcacttggtgggatcttgttagccttggctggaaccagggaccaactccttctctgaagtccatttggg
ctgccactaagttttgctcttgttagtctctatgctgtctaggagtttccactcctatgactcgagaatcttaccacggg
gatgtttcaggcccaacttgcttccctctgactaagggttcaaaaaactattttctgcttcttttggacgttaggaccaa
taagccgatcagaaagaccactctcagctgttcggaaaaatgtgtgtgagaagaaggatccagcaaatgctgcttccatt
gtcctcaaagctatgcaagcagaaaatgagacactacaaaaggagctgctctgtaggcagctggaggtctctacagaggt
cagtagcacgggggacgtgtcttattcaaaaacagccacagcaggtggctgggcatagacttccctgctccatctggcct
ctgctatggaagctgactatttggctactgcacagagggatctgacaggatcaggatgttcttccaaaatgttgctttgc
aaccatttgccttgaaatggaccatgtgctctgtccaacgttaaataaaggttttcttttccttggcttcctagaatttt
ttttttcattttaaatagaaactggttttcttaagaagaactatcctgtctcctttttgtagtctattatttaacatttt
agaagctgttaggaagagagtagtaacttacaaagaagggaagccctcatgcttgcctggaggtgaggctgaattataaa
tcttttccattcctgaaaaggaagctcctgtgtgtacaagcaatcaattcttgtgtagccgtggcagaatcttactaaaa
attgaccatgctaatatttgtagaatcgctgtccagactcatctagttgctgattgtggtttgtgaaaggaaggacagat
agaatattctctgccaagagtccttgagagggacgttgactgcttgaatagggcatgggagttcggcacatatactgacc
tcccaattcagaccagtccccagcttcattgtctggagagtgaagttctcttgtgagtttgtccttatttcccttctgtg
cagtcactgctggcttctggctctgcaacagtggacgttcctccagaacagcaggaggacgcagttatctccacagccct
ggaacaaactggacttctggaaaacaggtggcagttttgaatcctttgagtccattctcaggtgcaatatacttctatct
ctgcatggggatgcccaatggactcctctgctagttctgctctccattgcatctgattactaggacattcagaaggcaac
atgggcacaagtatcttcatctgcaaagggtgtctgtgaaggccgtaggttggggtatgggatggcaaaaggtgatttgg
agactgagataggttcttcataaaaatttgagaggtcagtattttcataatgaagtgtgaaccttgtgctgtgagcaaca
caagaaacagcatctcagcttgctggttcttggtttatattcaatattctgcaaacttgcagtagtattctttatcaata
aaactaatggcatattttctcctt

Protein
Protein IDhabu1_s2789_g10017.t1
Definition-
>habu1_s2789_g10017.t1
MVTDFDEKHDEHLVLLQQRNRILKALERKDPLQLRLKQLEQGFTLYVNGANSEASRGRKVSPPALLGSGGARTVRANPVS
TKDLLKQGEQQERSIQSAPSKIQRREWLQKAVQIKTETGSRLYIAPPCEYSEDFESDESLDLQTTDYEENGTSQDLRQSL
EFARSQKQVKGEHSSEDSDSIEEEVPIEAPEKKEPAACLGGAAVPVLAKAALSPLSGTGSALATGPFVLEFKPNCPGIKK
EQSLSAKRKGTAEPYIPVKSMSSAAAGRRCLEEQEGTASSKREMVSKWPP
Protein IDhabu1_s2789_g10017.t2
Definition-
>habu1_s2789_g10017.t2
MVTDFDEKHDEHLVLLQQRNRILKALERKDPLQLRLKQLEQGFTLYVNGANSEASRGRKVSPPALLGSGGARTVRANPVS
TKDLLKQGEQQERSIQSAPSKIQRREWLQKAVQIKTETGSRLYIAPPCEYSEDFESDESLDLQTTDYEENGTSQDLRQSL
EFARSQKQVKGEHSSEDSDSIEEEVPIEAPEKKEPAACLGGAAVPVLAKAALSPLSGTGSALATGPFVLEFKPNCPGRST
Protein IDhabu1_s2789_g10017.t3
Definition-
>habu1_s2789_g10017.t3
MVTDFDEKHDEHLVLLQQRNRILKALERKDPLQLRLKQLEQGFTLYVNGANSEASRGRKVSPPALLGSGGARTVRANPVS
TKDLLKQGEQQERSIQSAPSKIQRREWLQKAVQIKTETGSRLYIAPPCEYSEDFESDESLDLQTTDYEENGTSQDLRQSL
EFARSQKQVKGEHSSEDSDSIEEEVPIEAPEKKEPAACLGGAAVPVLAKAALSPLSGTGSALATGPFVLEFKPNCPGRST

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Chromosome
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495