Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2789_g10021
Locus habu1_scaffold2789 : 942049 ... 945076 : +
To GenomeBrowser habu1_scaffold2789:942049..945076
Genes list of scaffold habu1_scaffold2789

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s2789_g10021.t1 gi|704172901|ref|XP_010132470.1| PREDICTED: general transcription factor 3C polypeptide 1, partial [Buceros rhinoceros silvestris] 0.0
habu1_s2789_g10021.t1 gi|543735166|ref|XP_005508559.1| PREDICTED: general transcription factor 3C polypeptide 1 [Columba livia] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 8.7
Venom grand-1 16.1
Pit, infrared sensing 10.6
Nose 8.6
Brain-1 5.4
Eye 7.9
fetal fibroblast 12.2
venom gland-2 18.0
Brain-2 7.0
Spleen 10.5
Lung 13.1
Liver 16.4
Kidney 13.7
Pancreas 17.6
Small intestine 10.9
Large intestine 11.8
Stomach 11.3
heart 9.2
ovary 6.1
cheek muscle 24.6

Transcript
Transcript IDhabu1_s2789_g10021.t1
Definition-
>habu1_s2789_g10021.t1
ctacctgctcatgagaggctactgtgccccagggatcatcaacacccggaatttgagtcccacagacaacattgttgttg
attcctgtcaagtgaaagtgaggctgagagcaacacctgcccaaaatggcctcttggctgaagtcccatctgacttggag
agcatgccggttggagcctcttgcctccccagttccttcaccaaatgtctcagggtcccagaagagggtgatccaaaact
tcagttgctggaccattacagtcacagctctggagatgctgctgcagcccttgaaatcttctctgccatagaggccactt
cacactttggggtagaccaggtgaatatcgccaggcagttccagcattatgaagaagctgttattgggcgcactcgagtc
ttgcagcaatatcttcaggatcttcttgatttggagcaggtgttggaagtaggtggaaaaactacccggctggtggcaaa
gagatttgcaagtccgtggctgttgcattctgtgggtctcaaggacatcagtgagaacctttcaggcaaagagccgcatg
caaagagggaccgtgctgagcaggaacacgaggaaggagacgctgcctcctctgctgcagcggcaagaggagagccagcc
aggaaaaggtcaagaggagaagggggggaggaggagggggttccagagacaagggctctttcctcaagctccccatgctg
ggaggaagccaggacccctgcggcgcaaggagaagctgccacgcagaagtgcagtatgggcatcccctcctgtaggaaaa
aagccccagccctccctggcagagaagtcttggatgggggaaagcccagccaagagccccatgaggattccttgtcattc
caagaggataatgaaactcccagcggatgtgcggcagggcaatctcttcaggctgaaatgagacgggatagcatctgctt
tgtggggcgaccttggcgcattgtggatggcagtctgaacaagccagtctgcaaagggatcatggaaggggtgcttggcc
acattatgacaaaacctggcatcacagaagcggccctgcagcaccactacctgggcgtcttgcagccagtggctctcctg
gagatcctacagaatgccagaaaaaactatgatgttccccagaagctgacctccatgtctcgttgcccttctccctcttc
gtccctgaaggctctggagtctctgggctgcatcaggaaattccactttgaaaggctggccgctgccgcgcttttctcca
agcctgcctgggaagaaacaatcgccggcggcaagctgagcgacgctgcagacactttctacgagccggccatcgactgc
accctgaaaatgggcagggtcttcccctacgaactgaactggaacaagtggggtccgggggcgcccctgtgagctccggg
ggcaaataaagcaactttattaaagcgactcc

Protein
Protein IDhabu1_s2789_g10021.t1
Definition-
>habu1_s2789_g10021.t1
MPVGASCLPSSFTKCLRVPEEGDPKLQLLDHYSHSSGDAAAALEIFSAIEATSHFGVDQVNIARQFQHYEEAVIGRTRVL
QQYLQDLLDLEQVLEVGGKTTRLVAKRFASPWLLHSVGLKDISENLSGKEPHAKRDRAEQEHEEGDAASSAAAARGEPAR
KRSRGEGGEEEGVPETRALSSSSPCWEEARTPAAQGEAATQKCSMGIPSCRKKAPALPGREVLDGGKPSQEPHEDSLSFQ
EDNETPSGCAAGQSLQAEMRRDSICFVGRPWRIVDGSLNKPVCKGIMEGVLGHIMTKPGITEAALQHHYLGVLQPVALLE
ILQNARKNYDVPQKLTSMSRCPSPSSSLKALESLGCIRKFHFERLAAAALFSKPAWEETIAGGKLSDAADTFYEPAIDCT
LKMGRVFPYELNWNKWGPGAPL

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