Gene
| Gene Model ID | habu1_s2789_g10023 |
|---|---|
| Locus | habu1_scaffold2789 : 945789 ... 947033 : + |
| To GenomeBrowser | habu1_scaffold2789:945789..947033 |
| Genes list of scaffold | habu1_scaffold2789 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| u11 u12 small nuclear ribonucleoprotein 25 kda protein | GO:0005689 GO:0005737 GO:0045171 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g10023.t1 | gi|327289177|ref|XP_003229301.1| | PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Anolis carolinensis] | 0.0 |
| habu1_s2789_g10023.t1 | gi|542167114|ref|XP_005492146.1| | PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Zonotrichia albicollis] | 1.99965e-42 |
| habu1_s2789_g10023.t1 | gi|527269072|ref|XP_005152566.1| | PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Melopsittacus undulatus] | 1.99965e-42 |
| habu1_s2789_g10023.t1 | gi|471365744|ref|XP_004373412.1| | 9.00054e-42 | |
| habu1_s2789_g10023.t1 | gi|585692108|ref|XP_006894931.1| | PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Elephantulus edwardii] | 9.99967e-42 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 21.0 |
| Venom grand-1 | 75.8 |
| Pit, infrared sensing | 26.2 |
| Nose | 36.8 |
| Brain-1 | 14.6 |
| Eye | 22.4 |
| fetal fibroblast | 17.3 |
| venom gland-2 | 153.4 |
| Brain-2 | 24.0 |
| Spleen | 90.0 |
| Lung | 50.2 |
| Liver | 84.8 |
| Kidney | 47.5 |
| Pancreas | 319.9 |
| Small intestine | 72.9 |
| Large intestine | 63.6 |
| Stomach | 116.4 |
| heart | 78.1 |
| ovary | 20.6 |
| cheek muscle | 67.9 |
Transcript
| Transcript ID | habu1_s2789_g10023.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10023.t1 tgcgacctcccggcgcaggtgacccccgaggagatcggctcgcaggtggcgctcgagtacggccaggcgatgacggtgcg cgtgcgcagagtcgacgcacccgaggcacccatgcccgtggtggtggtgcagagcgcgagcgtgctggagctcaagaagg cgctgcggcggttcgtgcagctgcggcaggagcgccagggcggcgcgcggcacatcagctggaggcacgtctggcggacc tacagcctgaccttcggcggagagaaactggcggacgaccgcaagaagctgcgggagtacgggattcgcaatcgggatga ggtcagttttgtgaaaaggctccggcaatgaactcccaggcaaccatcctggtgctctttgggaatttgtctgagcccct tctgagtgaacctcttaaaaaggctctgtaggagggaacagggaagaagccgcttcagatctgctttgtttcagagtaac ccccagaattggtgttcagttctgcacatatggaacagctgcctgtgcggtgactgagaatccatatttgaaaaagtgct ggatctttttctgaagatatcagtgaatctgaagccataacagccagccagtaacattaaaatttcttaaattataataa agtatgctgaaagttttttctgt |
|
Protein
| Protein ID | habu1_s2789_g10023.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10023.t1 MTVRVRRVDAPEAPMPVVVVQSASVLELKKALRRFVQLRQERQGGARHISWRHVWRTYSLTFGGEKLADDRKKLREYGIR NRDEVSFVKRLRQ |
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