Gene
| Gene Model ID | habu1_s2789_g10024 |
|---|---|
| Locus | habu1_scaffold2789 : 947280 ... 958898 : - |
| To GenomeBrowser | habu1_scaffold2789:947280..958898 |
| Genes list of scaffold | habu1_scaffold2789 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| inactive rhomboid protein 1 isoform x2 | EC:3.4.21.0 GO:0000139 GO:0004252 GO:0005789 GO:0008283 GO:0016021 GO:0016477 GO:0042058 GO:0050709 GO:0061136 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g10024.t2 | 2 | 1 | Rhomboid_SP | 92 | 147 | 0.0 | 297.7 | 3.7e-26 | 2.7e-22 | 79.4 |
| habu1_s2789_g10024.t2 | 2 | 2 | Rhomboid_SP | 220 | 381 | 0.0 | 297.7 | 0.0 | 0.0 | 217.5 |
| habu1_s2789_g10024.t2 | 1 | 1 | Rhomboid | 722 | 860 | 2.3e-30 | 105.5 | 3.2e-34 | 2.3e-30 | 105.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g10024.t2 | gi|513208967|ref|XP_004945410.1| | PREDICTED: inactive rhomboid protein 1 isoform X17 [Gallus gallus] | 0.0 |
| habu1_s2789_g10024.t2 | gi|513208970|ref|XP_004945411.1| | PREDICTED: inactive rhomboid protein 1 isoform X18 [Gallus gallus] | 0.0 |
| habu1_s2789_g10024.t2 | gi|513208973|ref|XP_004945412.1| | PREDICTED: inactive rhomboid protein 1 isoform X19 [Gallus gallus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 15.9 |
| Venom grand-1 | 25.1 |
| Pit, infrared sensing | 14.3 |
| Nose | 10.0 |
| Brain-1 | 1.9 |
| Eye | 8.6 |
| fetal fibroblast | 11.3 |
| venom gland-2 | 15.7 |
| Brain-2 | 1.6 |
| Spleen | 5.8 |
| Lung | 13.2 |
| Liver | 7.8 |
| Kidney | 6.3 |
| Pancreas | 7.1 |
| Small intestine | 7.4 |
| Large intestine | 10.0 |
| Stomach | 9.0 |
| heart | 10.0 |
| ovary | 7.5 |
| cheek muscle | 9.3 |
Transcript
| Transcript ID | habu1_s2789_g10024.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10024.t1 cgggcggagggagccgcttctccgcccggcgcattcctgaggcctgagtcacgcccggcccggcccggcccggcccgcct tctgcgccaggccggctgcgccgaggccggccctcctcgctgaatggccgtccggccagcgctccctggacggccccggc tggagcggtgggcagccccggctccgcggctgggcttctgaagagggaagatggctgagggcctcccggacagctccagc agcttgcagaggaagaagcctccttggctgaaactggacattccagtggccccgctcttggctgcagcagaggaaccagc ctcgctccagcccttgaggcgccaggccttcttccgaagtgtcagcatgcctgcggagaacagcctctttcctgctgcct acagcgaggcacggcggcctgtcctgcagcgacagacgtccatcacccagaccatccggaggagcacagcagactggttt ggggtcagcaaggggagcgatgcccctcagaagtggcaacggaagagcttgcgccactgcagcctgcgctacggaaagct gaagccacaggccctccgcgaaatggaccttccgagccaggacaacatatctctggccagcacggagacccccccgccac tctatctgcccccttgcccgcctggcatgcagagaataatcgaccccctggcccgtggacgggccttccgagtggccgag gattgcgatggctgcagcgtgccccccaccccagccacgcccggagcagcctcactgtgctccttcaccagctcacgctc tggcttcggtcgctggcctcggcggcggaagagggagtcagtggctaagatgagcttcagagcagcagcagcgctagtga agggccgttctgtgagagatggcaccctgcgcaggacgcgacagcgcagcttcactccggccagcttcctggaggaagac ttcaccatggagttcccagatgagctggacacctccttctttgccagggaagggctcctgccagaagagccgtccatata tcctgatgaggtttttgagaccccctctgaagcagccctcagggtccccgaggcgaagatgctgcaggttcagccagccc tcacagggggggctctggaccggaatgagctagagagaagccacctgctcttccccctggagcgtggctggcggaaacag aaagagggggcttcagtgcaaccaaaggtccgtctgcggcaagaggtggtcagcttaggcctccagcagcgtggccagcg catcaccgttcctgtccgcaaactcttttccaaagagaaacgtccctacggcttaggcatggtgggccggctgaccaacc ggacgtaccgcaagcgcatcgatagctttgtgaagcagcagattgaggacatggatgaccaccggccgttcttcacctac tgggtcaccttcgtgcattcactcatcaccatcctggccgtctctatctacgggattgctcctgtggggttttcgcagca cgagacggtggactcggtcctgagaaatcggggtatatatgagaacgtgaaatacgtccagcaagagaatttctggatag ggcccagctcggaagctctcatccatctgggagcaaagttcgccccttgcatgcgacaggaccagcaggtgcacagtttc atccacgcagcccgtgagaaagagaagcactctgcctgctgtgtgcgcaacgacaagtcaggctgtgtgcagacggccga ggaggagtgttcctccactttggccgtgtgggtgaagtggccaagtcacccgagcactcctttgctggcagggggcagga ggaagtttggctctgtgtgtcaccaagaccccagggtgtgtgagcagccagcatccatggaccctcatgagtggcctgat gacatcaccaaatggcctatctgcaccaacaacagtgctgggaaccacaccaaccacctgcacatggactgtgtgatcac cgggcggccctgctgtattggcatcaagggaaggtgtgagatcacctcacgggaatactgcaccttcatgcatggttact tccatgaagaggccacactttgctcccaggtgcactgcatggatgacatctgcggcctcctccccttcctcaaccccgag gtgcccgatcaggtctaccgcctgtggctgtcgctgttccttcatgcagggatcctgcactgccttgtgtctgtatgctt ccagatgaccatcttgcgtgacttggagaagctggctggctggcaccgcatttccctgatctacttatttagcggcatca cagggaacctggccagcgctgttttcctcccctaccgggctgaggttggcccagcaggctcccagtttggcatcttggcc tgcctctttgtggagcttttccagagttggcagatcctagctcgaccctggagggccttcttcaaactactggtgatcgt gctgttcctgtttgccttcggcctccttccctggatagataactttgctcacatctgtggctttatcagtggcctcttcc tgtccttcgccttcctcccatacatcagctttggcaaattggacctgtaccgaaagcggtgtcagatcattatcttccag ttggtcttcgtggggctcctctccggactggtggtgctgttttacttctaccccattcgctgccagtggtgtgaggtcct cacctgccttcccttcactgacaatttctgcgagaaatatggcctggatgcccagctccactgagcgggcaggggtgccg tcattggctgccttgggcaaagctggcctggtgctacttgccagactgccagccaacttaaaattccgttcatccctgtg ctgccttatcttggagactggaactttttcagcacacagaaagttggtgccttgttcaattttactgaaccttttttgtt gccacatttttattacgctagtttcacagtgacccttttcatgagatttgttgttaccctggtggtgattaaaaatgaag gtagcgttttagctacatttccattaagttttggagtgtgccaaaattgaggttactgacaaatacctatcaaagcaaag agcaattcttaattcagtgttgacccaatttctaacatacaaatactgcacttggatgaattctaacatttaaaatgaac agctgcctgtatttgattcaacagctttgtaaaaaaaatgttttcttggcaactttataggcaagtgtcaagcacagctt ctttcctgtaaaaaatataattgcttatattttgttggaat |
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| Transcript ID | habu1_s2789_g10024.t2 |
| Definition | - |
>habu1_s2789_g10024.t2 cgggcggagggagccgcttctccgcccggcgcattcctgaggcctgagtcacgcccggcccggcccggcccggcccgcct tctgcgccaggccggctgcgccgaggccggccctcctcgctgaatggccgtccggccagcgctccctggacggccccggc tggagcggtgggcagccccggctccgcggctgggcttctgaagagggaagatggctgagggcctcccggacagctccagc agcttgcagaggaagaagcctccttggctgaaactggacattccagtggccccgctcttggctgcagcagaggaaccagc ctcgctccagcccttgaggcgccaggccttcttccgaagtgtcagcatgcctgcggagaacagcctctttcctgctgcct acagcgaggcacggcggcctgtcctgcagcgacagacgtccatcacccagaccatccggaggagcacagcagactggttt ggggtcagcaaggggagcgatgcccctcagaagtggcaacggaagagcttgcgccactgcagcctgcgctacggaaagct gaagccacaggccctccgcgaaatggaccttccgagccaggacaacatatctctggccagcacggagacccccccgccac tctatctgcccccttgcccgcctggcatgcagagagtaggaggaaggaagggtggtggcaggtccaaaggaaatgcagat gctgtgggaagcagttctgggataagacacctgttccccgctcttcttcacctggtgcccccccaaagctcctcctggga acctgtaatacttgctgaagcccaactggtggacgggctgccgtggctgatgccctcagggccatttccatctctctgct gtcagataatcgaccccctggcccgtggacgggccttccgagtggccgaggattgcgatggctgcagcgtgccccccacc ccagccacgcccggagcagcctcactgtgctccttcaccagctcacgctctggcttcggtcgctggcctcggcggcggaa gagggagtcagtggctaagatgagcttcagagcagcagcagcgctagtgaagggccgttctgtgagagatggcaccctgc gcaggacgcgacagcgcagcttcactccggccagcttcctggaggaagacttcaccatggagttcccagatgagctggac acctccttctttgccagggaagggctcctgccagaagagccgtccatatatcctgatgaggtttttgagaccccctctga agcagccctcagggtccccgaggcgaagatgctgcaggttcagccagccctcacagggggggctctggaccggaatgagc tagagagaagccacctgctcttccccctggagcgtggctggcggaaacagaaagagggggcttcagtgcaaccaaaggtc cgtctgcggcaagaggtggtcagcttaggcctccagcagcgtggccagcgcatcaccgttcctgtccgcaaactcttttc caaagagaaacgtccctacggcttaggcatggtgggccggctgaccaaccggacgtaccgcaagcgcatcgatagctttg tgaagcagcagattgaggacatggatgaccaccggccgttcttcacctactgggtcaccttcgtgcattcactcatcacc atcctggccgtctctatctacgggattgctcctgtggggttttcgcagcacgagacggtggactcggtcctgagaaatcg gggtatatatgagaacgtgaaatacgtccagcaagagaatttctggatagggcccagctcggaagctctcatccatctgg gagcaaagttcgccccttgcatgcgacaggaccagcaggtgcacagtttcatccacgcagcccgtgagaaagagaagcac tctgcctgctgtgtgcgcaacgacaagtcaggctgtgtgcagacggccgaggaggagtgttcctccactttggccgtgtg ggtgaagtggccaagtcacccgagcactcctttgctggcagggggcaggaggaagtttggctctgtgtgtcaccaagacc ccagggtgtgtgagcagccagcatccatggaccctcatgagtggcctgatgacatcaccaaatggcctatctgcaccaac aacagtgctgggaaccacaccaaccacctgcacatggactgtgtgatcaccgggcggccctgctgtattggcatcaaggg aaggtgtgagatcacctcacgggaatactgcaccttcatgcatggttacttccatgaagaggccacactttgctcccagg tgcactgcatggatgacatctgcggcctcctccccttcctcaaccccgaggtgcccgatcaggtctaccgcctgtggctg tcgctgttccttcatgcagggatcctgcactgccttgtgtctgtatgcttccagatgaccatcttgcgtgacttggagaa gctggctggctggcaccgcatttccctgatctacttatttagcggcatcacagggaacctggccagcgctgttttcctcc cctaccgggctgaggttggcccagcaggctcccagtttggcatcttggcctgcctctttgtggagcttttccagagttgg cagatcctagctcgaccctggagggccttcttcaaactactggtgatcgtgctgttcctgtttgccttcggcctccttcc ctggatagataactttgctcacatctgtggctttatcagtggcctcttcctgtccttcgccttcctcccatacatcagct ttggcaaattggacctgtaccgaaagcggtgtcagatcattatcttccagttggtcttcgtggggctcctctccggactg gtggtgctgttttacttctaccccattcgctgccagtggtgtgaggtcctcacctgccttcccttcactgacaatttctg cgagaaatatggcctggatgcccagctccactgagcgggcaggggtgccgtcattggctgccttgggcaaagctggcctg gtgctacttgccagactgccagccaacttaaaattccgttcatccctgtgctgccttatcttggagactggaactttttc agcacacagaaagttggtgccttgttcaattttactgaaccttttttgttgccacatttttattacgctagtttcacagt gacccttttcatgagatttgttgttaccctggtggtgattaaaaatgaaggtagcgttttagctacatttccattaagtt ttggagtgtgccaaaattgaggttactgacaaatacctatcaaagcaaagagcaattcttaattcagtgttgacccaatt tctaacatacaaatactgcacttggatgaattctaacatttaaaatgaacagctgcctgtatttgattcaacagctttgt aaaaaaaatgttttcttggcaactttataggcaagtgtcaagcacagcttctttcctgtaaaaaatataattgcttatat tttgttggaat |
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Protein
| Protein ID | habu1_s2789_g10024.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10024.t1 MAEGLPDSSSSLQRKKPPWLKLDIPVAPLLAAAEEPASLQPLRRQAFFRSVSMPAENSLFPAAYSEARRPVLQRQTSITQ TIRRSTADWFGVSKGSDAPQKWQRKSLRHCSLRYGKLKPQALREMDLPSQDNISLASTETPPPLYLPPCPPGMQRIIDPL ARGRAFRVAEDCDGCSVPPTPATPGAASLCSFTSSRSGFGRWPRRRKRESVAKMSFRAAAALVKGRSVRDGTLRRTRQRS FTPASFLEEDFTMEFPDELDTSFFAREGLLPEEPSIYPDEVFETPSEAALRVPEAKMLQVQPALTGGALDRNELERSHLL FPLERGWRKQKEGASVQPKVRLRQEVVSLGLQQRGQRITVPVRKLFSKEKRPYGLGMVGRLTNRTYRKRIDSFVKQQIED MDDHRPFFTYWVTFVHSLITILAVSIYGIAPVGFSQHETVDSVLRNRGIYENVKYVQQENFWIGPSSEALIHLGAKFAPC MRQDQQVHSFIHAAREKEKHSACCVRNDKSGCVQTAEEECSSTLAVWVKWPSHPSTPLLAGGRRKFGSVCHQDPRVCEQP ASMDPHEWPDDITKWPICTNNSAGNHTNHLHMDCVITGRPCCIGIKGRCEITSREYCTFMHGYFHEEATLCSQVHCMDDI CGLLPFLNPEVPDQVYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISLIYLFSGITGNLASAVFLPYRAEVG PAGSQFGILACLFVELFQSWQILARPWRAFFKLLVIVLFLFAFGLLPWIDNFAHICGFISGLFLSFAFLPYISFGKLDLY RKRCQIIIFQLVFVGLLSGLVVLFYFYPIRCQWCEVLTCLPFTDNFCEKYGLDAQLH |
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| Protein ID | habu1_s2789_g10024.t2 |
| Definition | - |
>habu1_s2789_g10024.t2 MAEGLPDSSSSLQRKKPPWLKLDIPVAPLLAAAEEPASLQPLRRQAFFRSVSMPAENSLFPAAYSEARRPVLQRQTSITQ TIRRSTADWFGVSKGSDAPQKWQRKSLRHCSLRYGKLKPQALREMDLPSQDNISLASTETPPPLYLPPCPPGMQRVGGRK GGGRSKGNADAVGSSSGIRHLFPALLHLVPPQSSSWEPVILAEAQLVDGLPWLMPSGPFPSLCCQIIDPLARGRAFRVAE DCDGCSVPPTPATPGAASLCSFTSSRSGFGRWPRRRKRESVAKMSFRAAAALVKGRSVRDGTLRRTRQRSFTPASFLEED FTMEFPDELDTSFFAREGLLPEEPSIYPDEVFETPSEAALRVPEAKMLQVQPALTGGALDRNELERSHLLFPLERGWRKQ KEGASVQPKVRLRQEVVSLGLQQRGQRITVPVRKLFSKEKRPYGLGMVGRLTNRTYRKRIDSFVKQQIEDMDDHRPFFTY WVTFVHSLITILAVSIYGIAPVGFSQHETVDSVLRNRGIYENVKYVQQENFWIGPSSEALIHLGAKFAPCMRQDQQVHSF IHAAREKEKHSACCVRNDKSGCVQTAEEECSSTLAVWVKWPSHPSTPLLAGGRRKFGSVCHQDPRVCEQPASMDPHEWPD DITKWPICTNNSAGNHTNHLHMDCVITGRPCCIGIKGRCEITSREYCTFMHGYFHEEATLCSQVHCMDDICGLLPFLNPE VPDQVYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISLIYLFSGITGNLASAVFLPYRAEVGPAGSQFGILA CLFVELFQSWQILARPWRAFFKLLVIVLFLFAFGLLPWIDNFAHICGFISGLFLSFAFLPYISFGKLDLYRKRCQIIIFQ LVFVGLLSGLVVLFYFYPIRCQWCEVLTCLPFTDNFCEKYGLDAQLH |
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