Gene
| Gene Model ID | habu1_s2789_g10027 |
|---|---|
| Locus | habu1_scaffold2789 : 979648 ... 980464 : + |
| To GenomeBrowser | habu1_scaffold2789:979648..980464 |
| Genes list of scaffold | habu1_scaffold2789 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| alpha globin | GO:0005344 GO:0005506 GO:0005833 GO:0015671 GO:0019825 GO:0020037 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g10027.t1 | 1 | 1 | Globin | 7 | 106 | 1.4e-24 | 86.5 | 1.2e-28 | 1.8e-24 | 86.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g10027.t1 | gi|602656385|ref|XP_007433927.1| | PREDICTED: hemoglobin subunit alpha-D-like [Python bivittatus] | 0.0 |
| habu1_s2789_g10027.t1 | gi|327291580|ref|XP_003230499.1| | PREDICTED: hemoglobin subunit alpha-D-like [Anolis carolinensis] | 0.0 |
| habu1_s2789_g10027.t1 | gi|525013172|ref|XP_005054186.1| | PREDICTED: hemoglobin subunit alpha-D-like [Ficedula albicollis] | 0.0 |
| habu1_s2789_g10027.t1 | gi|683917503|ref|XP_009090211.1| | PREDICTED: hemoglobin subunit alpha-D [Serinus canaria] | 0.0 |
| habu1_s2789_g10027.t1 | gi|729759595|ref|XP_010576698.1| | PREDICTED: hemoglobin subunit alpha-D [Haliaeetus leucocephalus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 67.0 |
| Venom grand-1 | 18.9 |
| Pit, infrared sensing | 155.7 |
| Nose | 5.5 |
| Brain-1 | 69.1 |
| Eye | 46.9 |
| fetal fibroblast | 3.0 |
| venom gland-2 | 147.9 |
| Brain-2 | 63.4 |
| Spleen | 188.2 |
| Lung | 3476.2 |
| Liver | 517.0 |
| Kidney | 40.1 |
| Pancreas | 80.0 |
| Small intestine | 34.4 |
| Large intestine | 270.9 |
| Stomach | 73.3 |
| heart | 680.2 |
| ovary | 2.9 |
| cheek muscle | 439.0 |
Transcript
| Transcript ID | habu1_s2789_g10027.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10027.t1 ctgcctcaatctagcgacccacagatcttccctcgatctcctccttctctaccacaaccatggtgctgaccgccgaggat cgcaggctccttcaagcctccgttggcaaactgggctgtcgcctcgaggacattggcgccgatgcgctgaacaggttgtt aatggtcttcccgaagaccaagacctacttctcccattataacttgagtcccggctcgaaggacatcatccaccagggag agaaagtgggcaaggcgctggataacgccctgaagcatctggatgacctccgcggcgccctctcccagcttagcgacctg catgcctacaatctccgtgtggacccggtcaacttcaagctgctgtccaaatgcttcatagtgtctctggccactcacct gcgcaacgagtacaatccctgcgtctgcctggcctgggacaagttacttgaacaggtgtccgacatgctgtgtgagaaat acagatgagctccacgtgccacaaccggggccccttctttgccttcctctgagctgcctgccttcagggtgcctcacctg ggccactgagcaataaagttgtctttgaaccactgtctg |
|
Protein
| Protein ID | habu1_s2789_g10027.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10027.t1 MVLTAEDRRLLQASVGKLGCRLEDIGADALNRLLMVFPKTKTYFSHYNLSPGSKDIIHQGEKVGKALDNALKHLDDLRGA LSQLSDLHAYNLRVDPVNFKLLSKCFIVSLATHLRNEYNPCVCLAWDKLLEQVSDMLCEKYR |
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