Gene
| Gene Model ID | habu1_s2789_g10029 |
|---|---|
| Locus | habu1_scaffold2789 : 986068 ... 992926 : + |
| To GenomeBrowser | habu1_scaffold2789:986068..992926 |
| Genes list of scaffold | habu1_scaffold2789 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transmembrane protein 8a | GO:0016021 GO:0043227 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g10029.t1 | 1 | 1 | DUF3522 | 539 | 723 | 0.0 | 201.0 | 0.0 | 0.0 | 200.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g10029.t1 | gi|602656395|ref|XP_007433932.1| | PREDICTED: transmembrane protein 8A [Python bivittatus] | 0.0 |
| habu1_s2789_g10029.t1 | gi|530638830|ref|XP_005306216.1| | PREDICTED: transmembrane protein 8A [Chrysemys picta bellii] | 0.0 |
| habu1_s2789_g10029.t1 | gi|558169262|ref|XP_006124664.1| | PREDICTED: transmembrane protein 8A [Pelodiscus sinensis] | 0.0 |
| habu1_s2789_g10029.t1 | gi|719794542|ref|XP_010224481.1| | PREDICTED: transmembrane protein 8A, partial [Tinamus guttatus] | 0.0 |
| habu1_s2789_g10029.t1 | gi|564245574|ref|XP_006261908.1| | PREDICTED: transmembrane protein 8A [Alligator mississippiensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.2 |
| Venom grand-1 | 2.4 |
| Pit, infrared sensing | 5.4 |
| Nose | 3.4 |
| Brain-1 | 2.7 |
| Eye | 3.3 |
| fetal fibroblast | 7.0 |
| venom gland-2 | 1.6 |
| Brain-2 | 2.7 |
| Spleen | 1.6 |
| Lung | 5.3 |
| Liver | 7.4 |
| Kidney | 3.9 |
| Pancreas | 2.7 |
| Small intestine | 8.0 |
| Large intestine | 10.0 |
| Stomach | 8.6 |
| heart | 2.5 |
| ovary | 0.5 |
| cheek muscle | 1.3 |
Transcript
| Transcript ID | habu1_s2789_g10029.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10029.t1 gcgcgtgcccaactgccttccctcctgccccgcgggttccccctggcgccagcgccgggcggccggccagtccgggtccg gagccttggcggagatggctggcgcttcgctcggccgctgctctctgctcttcctgctcctggccgccgctgcccgctcg ccgctggagaagaaggaggctgagcggaccgagggcaccgaggatccggcgtttctttctgagtatttttcccagagctc acagacgctgtccttctacagttggtatggaagtgccaaaattttccgtttccgtgtccctgaggacacagtgcagttgc ggtggctcctgcaggcttccagagacaaaggccctggatgtggcaagactcaagttaccttccacatccgctttggtgcc cctcctgtcatcaaccctctggacacacagtttcctgtgaacacaagcatccctccatccttcagccaaactctgacctt ggatgctgccctgcagaatagcacttttgtcaacctcactaacccggctgctggggactggtttcttgctgcccacctgc ccccagcatcaagcaagattgagatgaagggcttctccaggtcttgcagctacatcttccagcctgacctgtttgtgctg cgccaagtggacattgtagtccttaagcctgatgtccctgtgcaacgggttctgtccaagggggctattaggccacttca cgccaagatctttgttcctgagtacactgctgggatgcgctttgagctggggaaatgcatggagaatggctctgctgcag cctgtgccctccgagtcaccttgggtttggctgtgctctcttggtcttcccagaaggtgcttcactgcctggaagcttgc agcatcttcttggcttccccaccatggggaaggtgggtttggatcacagtggagagcctcggtggtatcaatgccagcgt gtcctttgagatggcggtgttcttcatagcatgcaagccaggagacgcggcttcctttcttggcttctatccgagcttga agcaggaccaggggatgccaatgcctggagaccacctcaacagcacgttgcttgccatgggcagcagccacaatgcctct ggcccaggaaacacctgcctgcgtggccagccggttgtccgcgaggagctggatgttgcgtctgtgcgtttccgcattct tggagattccactgtgcctgtccagagcgatattcccactctgctactccttaacctaaattcaggcatggacagtggag ggaacctggtgctgaacctgatgctgaaccagacttctggaaatgccactgtgttggcctgcttgagccctgcatctcct gcacttttcctgaatggctctggtggctgctggacagccttcgctcagggctacttcctgaatgtgagcatgtcctccag ggaagctgcagtcattgttccttacccacaaaccggcaactggtatctgtctctgaaactgctctgcccaaaggaatcag aagactgtgatcaagctcaaggccaggtagccatgcttgcctacctcaccccctgctatgacgattgtgggacctacgga cagtgcagcctcatgaggcgccatggttacctctacaccggctgcatctgtaaggctggctgggctggctggagctgcac agatggaaccaaagctcagtctgcaggcacccagatcctgtccaccctcttgctcactctcagcaacctgttcttcctgc ctgcaatcattgtggccctttaccattatcacctggttgaggcctccgtctataccttcaccatgttcttttccacattc taccacgcctgtgaccagcctggcattgccgtaatgtgcattatggactacgacacattgcagttctgtgactttctggg ctctgttgtctctatctgggtgaccattctgtgcatggcaaaagtcaagaagattctgaaatatgtcctctgcatgctgg ggactctggtcattgcaatgtcgctacagctggaccgcaggggtgtgtggaatatgatggccccctgtgtttttgccctc actgtcatggccagcatttgggtctatcgtgggatctcccggcgccgctgctatcctccctcttggaagcgctgggtctt tttcctcttccctgggaccagcttggcacttgtggccatagcagtgtacaccttcatggaaaccactgaaaattactatt acactcacagcatctggcacatcatggtggcaagcagcgtggccttcctccttcctcctggagataagcagaatgacccg tgggcctggtcccgtaaactgctttgccattaccaaatctgtaagaatgaccaggaggaactctacacagtgaggtgatt ggaaaaggaggggctgatgcagccagactccctcccaatggatccacttaatttggcaggaagaatgtggaaaaaaaaaa ccccattccttctggtgtgctggacgaaaatgaaggcagccaggcagtgcaatatctggctgaagaggaggctgtctggt agaacctgggcctttctgaatcttgggaaatgtagcttcatctcatggcagccttgggagtaatgagcagaaagtaaata ggtgcttcttgaacccagataatggctggggattaaggcaattcagggggactgaaggcaggagcatccatggtggatgc aggttcactatccaagctccaccacttctgccctgcatccaccaccttgtctccagaggcgagaccattagccccatgaa aataggtgaggaaggagctttcttctcagaagagtgccacacatcctggactggcttgtttgaactcaggtatatgaata gcactttattggtacacgaagactcctgcaggataaattcttttttcaaatatagactcccttcctgggtggggagaggg cagcaaacataggaatccttggccagggtggcccaggattgggtcagattttctctgtatagcaacagaacctgttcctg aaggcagaagaatcaggtctctgaacaggccacagagtagctggtgttgcctgtcagacacacaccccccccccgctgtt tttgtagcctctaggagcccggaggtcattcgcctgtccttgtgttaacctgcacttaaaagagccttggtccagggtcg atgtggaatcactgcagtggataaagaaaactcaacttaattttaaattaaaaatgcaaacacggatatatcatcgtctc aggaaaagctctagcaactgctggtcgcaatatcctattatttacattccatcgaaccatctgtggcactttaaagcttt tttaaaaggaacagcttcctttaactttcacgtctttaattaaagtattttcagttcaattaaaaataatgcttgcattg gttaaa |
|
Protein
| Protein ID | habu1_s2789_g10029.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10029.t1 MAGASLGRCSLLFLLLAAAARSPLEKKEAERTEGTEDPAFLSEYFSQSSQTLSFYSWYGSAKIFRFRVPEDTVQLRWLLQ ASRDKGPGCGKTQVTFHIRFGAPPVINPLDTQFPVNTSIPPSFSQTLTLDAALQNSTFVNLTNPAAGDWFLAAHLPPASS KIEMKGFSRSCSYIFQPDLFVLRQVDIVVLKPDVPVQRVLSKGAIRPLHAKIFVPEYTAGMRFELGKCMENGSAAACALR VTLGLAVLSWSSQKVLHCLEACSIFLASPPWGRWVWITVESLGGINASVSFEMAVFFIACKPGDAASFLGFYPSLKQDQG MPMPGDHLNSTLLAMGSSHNASGPGNTCLRGQPVVREELDVASVRFRILGDSTVPVQSDIPTLLLLNLNSGMDSGGNLVL NLMLNQTSGNATVLACLSPASPALFLNGSGGCWTAFAQGYFLNVSMSSREAAVIVPYPQTGNWYLSLKLLCPKESEDCDQ AQGQVAMLAYLTPCYDDCGTYGQCSLMRRHGYLYTGCICKAGWAGWSCTDGTKAQSAGTQILSTLLLTLSNLFFLPAIIV ALYHYHLVEASVYTFTMFFSTFYHACDQPGIAVMCIMDYDTLQFCDFLGSVVSIWVTILCMAKVKKILKYVLCMLGTLVI AMSLQLDRRGVWNMMAPCVFALTVMASIWVYRGISRRRCYPPSWKRWVFFLFPGTSLALVAIAVYTFMETTENYYYTHSI WHIMVASSVAFLLPPGDKQNDPWAWSRKLLCHYQICKNDQEELYTVR |
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