Gene
| Gene Model ID | habu1_s2789_g10039 |
|---|---|
| Locus | habu1_scaffold2789 : 1035718 ... 1045000 : + |
| To GenomeBrowser | habu1_scaffold2789:1035718..1045000 |
| Genes list of scaffold | habu1_scaffold2789 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| heat shock protein 75 mitochondrial | GO:0005524 GO:0005634 GO:0005743 GO:0005759 GO:0006457 GO:0006950 GO:0019901 GO:0044822 GO:0051082 GO:0070062 GO:1901856 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g10039.t1 | 1 | 1 | HATPase_c_3 | 115 | 238 | 3.0e-12 | 46.3 | 1.5e-15 | 5.7e-12 | 45.4 |
| habu1_s2789_g10039.t1 | 1 | 1 | HATPase_c | 118 | 263 | 2.1e-08 | 33.8 | 1.1e-11 | 4.0e-08 | 32.9 |
| habu1_s2789_g10039.t1 | 2 | 1 | HSP90 | 269 | 296 | 0.0 | 265.7 | 6.1e-07 | 0.0022 | 16.4 |
| habu1_s2789_g10039.t1 | 2 | 2 | HSP90 | 296 | 706 | 0.0 | 265.7 | 0.0 | 0.0 | 249.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g10039.t1 | gi|637355264|ref|XP_008119095.1| | PREDICTED: heat shock protein 75 kDa, mitochondrial [Anolis carolinensis] | 0.0 |
| habu1_s2789_g10039.t1 | gi|641794141|ref|XP_008160750.1| | PREDICTED: heat shock protein 75 kDa, mitochondrial [Chrysemys picta bellii] | 0.0 |
| habu1_s2789_g10039.t1 | gi|57525126|ref|NP_001006175.1| | heat shock protein 75 kDa, mitochondrial [Gallus gallus] | 0.0 |
| habu1_s2789_g10039.t1 | gi|723127585|ref|XP_010280003.1| | PREDICTED: heat shock protein 75 kDa, mitochondrial, partial [Phaethon lepturus] | 0.0 |
| habu1_s2789_g10039.t1 | gi|694836142|ref|XP_009475613.1| | PREDICTED: heat shock protein 75 kDa, mitochondrial [Nipponia nippon] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 20.3 |
| Venom grand-1 | 47.2 |
| Pit, infrared sensing | 24.8 |
| Nose | 19.0 |
| Brain-1 | 8.0 |
| Eye | 18.1 |
| fetal fibroblast | 56.1 |
| venom gland-2 | 77.4 |
| Brain-2 | 11.0 |
| Spleen | 35.9 |
| Lung | 16.9 |
| Liver | 70.8 |
| Kidney | 49.7 |
| Pancreas | 91.9 |
| Small intestine | 49.4 |
| Large intestine | 28.1 |
| Stomach | 39.8 |
| heart | 24.8 |
| ovary | 18.6 |
| cheek muscle | 75.7 |
Transcript
| Transcript ID | habu1_s2789_g10039.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10039.t1 cggaagcggcctcgcgcgtgccgtggccatggggctggggaggctggtgctgttggggggctgcctccgccgcgcctccc tgtcggtcttcctccgcgccggacgggagcagagggccgcggcccccgcccgccgagccccgcctggcctggtctctgcg gcgagcccgtcccccgtccgcggcctgccctgttgggtttggcggcgctcgtgcagcagccacaccgctcgggacgaccc agaggcgccgccgccgccccggtcgcctagtaggcccgagagcgtcccaggttccacctcgaagcatgagttccaagctg aaacccagaaacttttggatattgtggcccgctccctctactctgagcaggaggtgttcatccgggagctgatctccaac agtagcgatgctctggagaagctgcgccacaaactcatctctgaaggaaaggtcctgccggaactcaggattgaactgga gacagatgaggaaaagtgcctggttgccatccaggacactggaattgggatgaatcgtgaagaacttctgtccaatttag ggaccattgcgagatctggctccaaggcctttctggatacattgaagagccaaacagaggccagcaataagattattggc caatttggagtgggcttctattcagtctttatggtggctaatcaagtggaagttttctccaagtcagcagagccagatag ctttggttattgctggcattcagacggttctgggacgttcgaaatttcagaagcttctggtgttcaggttggaactaaaa ttattctccatctaaaggaagattgcaaggagtttgccagtgaggagcgagtcaaagacatcatcaaaaagtatagcaac ttcatcagtttccccctctatctgaacgggcaacgtgtcaacaccttgcaggccctttggatgatggagcccaaggagat tggagattggcagcacacagagttctaccactttattgcccatgcatacgacgagcctcgctacaccctgcattacaaga ccgatgcacctctcaacatccgcagtatcttttacgtgccaggggtgaaaccttccatgtttgatgagagccaggagcaa ggttccagtgttgctctctacagtcgcaaggtcctcatcctgaccaaagctactgagatcttacccaaatggttacgttt cctgaaaggggttgtggacagtgaggatatccccttgaatctcagccgagaactgcttcaagagagtattcttgttagaa agctcagagaggttttacaacagaggctgatcaagttcttcattgaccagagtaagaaggaccctgagaaatatgccaca ttctttgaggactacggactgtttatccgcgagggaattatcatgctgcctgagcaggaagccaaggaggaagtagcaaa gctgttgcgctatgagtcctcgttgctacctccaggccaattaaccagcctcccagaatatgctagccgtatgccagctg gcagtagaaacatctattatctatgtgctcccactcgcaacttggctgaacattctccatattatgaagcaacaaagaag aaaaatgttgaggtgctcttctgctataagcagtttgatgagctgactcttctgcacctacgtgagtttgacaagaagaa actgatctcagtagagacagatattgctgttgaccattacaaggaggagacgtttgaggaaagtcactcagctgaaaatc gcctgagctcccaagcagcggaggacctcctagcctggatgaggaatgcccttggctcacgggttgccgctgtcaaggtg actccacgtctggattcacatccagccatgatcacagtgttggagatgggtgctgcccgccacttcctgcgcatgcagca gctggcaaagaccagtgaagagcgagcccaaatcctgcaacccacgttggagatcaatgccggacacacactagtcaaga aacttaaccagttacgaattgaccatcctgacttggcccaaatgctgcttgaccagatctatgacaatgccatgataacg gcaggactcagcgaagacccccgaccgatggtgaaccggctgaacgaactgcttgcccgggccctggagaagcactgaac cagccccagtgctagaagctcagtggcctccttgggctgccttcgtcacctctctgcccggggttcccagatggggcggc ctggggcagtggaaggttgtgcaactgtctcggataaaatatgcaataaaaagggtagacgcttctgctgct |
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Protein
| Protein ID | habu1_s2789_g10039.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10039.t1 MGLGRLVLLGGCLRRASLSVFLRAGREQRAAAPARRAPPGLVSAASPSPVRGLPCWVWRRSCSSHTARDDPEAPPPPRSP SRPESVPGSTSKHEFQAETQKLLDIVARSLYSEQEVFIRELISNSSDALEKLRHKLISEGKVLPELRIELETDEEKCLVA IQDTGIGMNREELLSNLGTIARSGSKAFLDTLKSQTEASNKIIGQFGVGFYSVFMVANQVEVFSKSAEPDSFGYCWHSDG SGTFEISEASGVQVGTKIILHLKEDCKEFASEERVKDIIKKYSNFISFPLYLNGQRVNTLQALWMMEPKEIGDWQHTEFY HFIAHAYDEPRYTLHYKTDAPLNIRSIFYVPGVKPSMFDESQEQGSSVALYSRKVLILTKATEILPKWLRFLKGVVDSED IPLNLSRELLQESILVRKLREVLQQRLIKFFIDQSKKDPEKYATFFEDYGLFIREGIIMLPEQEAKEEVAKLLRYESSLL PPGQLTSLPEYASRMPAGSRNIYYLCAPTRNLAEHSPYYEATKKKNVEVLFCYKQFDELTLLHLREFDKKKLISVETDIA VDHYKEETFEESHSAENRLSSQAAEDLLAWMRNALGSRVAAVKVTPRLDSHPAMITVLEMGAARHFLRMQQLAKTSEERA QILQPTLEINAGHTLVKKLNQLRIDHPDLAQMLLDQIYDNAMITAGLSEDPRPMVNRLNELLARALEKH |
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