Gene
| Gene Model ID | habu1_s2789_g10040 |
|---|---|
| Locus | habu1_scaffold2789 : 1045048 ... 1052474 : + |
| To GenomeBrowser | habu1_scaffold2789:1045048..1052474 |
| Genes list of scaffold | habu1_scaffold2789 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| structure-specific endonuclease subunit partial | GO:0004519 GO:0090305 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2789_g10040.t2 | 1 | 1 | BTB | 181 | 289 | 1.6e-10 | 40.9 | 4.2e-14 | 1.6e-10 | 40.9 |
| habu1_s2789_g10040.t2 | 1 | 1 | Slx4 | 754 | 810 | 3.7e-16 | 58.6 | 2.2e-19 | 8.2e-16 | 57.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2789_g10040.t2 | gi|530638887|ref|XP_005306244.1| | PREDICTED: structure-specific endonuclease subunit SLX4 isoform X3 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 27.3 |
| Venom grand-1 | 25.3 |
| Pit, infrared sensing | 19.2 |
| Nose | 17.4 |
| Brain-1 | 15.3 |
| Eye | 19.9 |
| fetal fibroblast | 15.4 |
| venom gland-2 | 35.0 |
| Brain-2 | 14.9 |
| Spleen | 29.9 |
| Lung | 29.0 |
| Liver | 34.2 |
| Kidney | 23.8 |
| Pancreas | 31.7 |
| Small intestine | 29.8 |
| Large intestine | 27.6 |
| Stomach | 24.8 |
| heart | 26.2 |
| ovary | 44.7 |
| cheek muscle | 27.0 |
Transcript
| Transcript ID | habu1_s2789_g10040.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10040.t1 ggaaggcggagcctgcgcagctgcgccgacaaaatgggcgactcggaggacgagtttcgcctgcggattccgccggggcg gcggcggcctcgcaggacaggcacagccgctgctcccgctgccgggcctccacccctcccgccgggccgcgggctaaagc ggggcggcgccccttcgacggctcggccggccggggggaagaggcggcgggcggcgggcggggagacgctggaggccgcg gccgggccggacgaggcccgccgaggactcgaggcccgagcggccctgctgctctcggaggccccagccgcgccccgcac gcccccgctgcccgccagccgttgggacgggggcccggcggcaagcccggccggctggctgtgggagttgagctcgttga cgggcgccccggccgtcaccccttggggggccaatcagaggccggagttccgcgcgcctggtgccccaacggagtctccg gagacggagcgtttcccaagcagagccggtgaatgctgcgaaggcggccgtccgagggatgccgataccttgcaagatct cgtggagttggccggggaaggactcacgttcacccagtggagccttgatattgggcggcctgagcccccggagcaagaac agatgccaggtgttcagcaaaaggcttttactcggttattggagaagcagcagcagcagcagcagcagcaactattccaa aattgctcttatgaaaaattccctcttggctcactggctgttgccttcaaggagatggtcaataatcctcatttgagcga tatccagatccaggtggacagtggggaagtcttctatgcccatatgtttgtattgtatgcacggtgtcctcagcttttac aatttgttgaccacagatgttttgtcgtggctgaagaaggagaagtcagagcctcccgtgtgctgttacatgatgctcca ggggatgctgttgctctgttcttgaagtacctttacacagctgaacatttcgtacctcaacatttgctgtcagatgtggt tgacctggcaataaggtttggagtgaaagaattggcggttctgtgtgaaggccaatctagtgaagagatatctgtagaaa agccagtggatgataaagacaaagttggaaattttgaggaacttttgaaatccatgtggcaagatgaagaaaccgcagca aaatctgtatgcagagatgaaatcaatgacagtatgaatgagcaggaactagaggagatttatgagtttgtggctactca gcgcagaatgacctctgatgaagcgaggaaggaaaaggtctgcactgaatgcagatatgatgaagtggaaaagaagatta gccaaattggtgcttcttgcccaagaaaagcactggagaagcccagaagagccatgacaattaaggaaggtgaaataaaa tatgatctagagtcatccaaattgaaaacctctaatgccagcatggaaaaagatctgaaaaagtattctgttgagttcca gctggattttaaggaaacagtgtcctttggagcaagtactagaaaagaacctacaagtgagattcatctcggattagata tggattccactcatagtaatcatctggagaggtctgcaacccaattttctgtctcagaaatgaaatgttctctctggaag cagaatattaacatagccaacaatgaaaccacaacaagaaattttccaagactttttcaagcgtcagcaaaagatctcca gattactttgtcaagagacctaaaagctcctttgataacatctgcatcacagccaaacatattagataggcttccctatc aaaatggcaagcaagagaatgtaaataggaagggagaagctcctattggcaacctagagaagtctggtgtggtgaatcct catgaactgaatattacgagtgaccatattgtagtactggattctgatgaagagctggaacaggaggcagaaaagaaaca ggcagaggccgcttcaagcttctctgagcaacaatcatggcataaagtgagcgctgttgccaacatgaactgctggagcc catctcctccccagcaggatgtaggtaaagtggcaggtggattggacacactaatttgtaatgaggtacaatctttggat gaaagccatcagcccttgaacctgagtaatcacaaagaaggcagcttctgggaaggtttagacaggagtgaaggaaggac attggtggtgcctaaaactcctctgccagcctggaatagcttggatgacatgcaggttgaaaaatccagattgaattctt cccttaaaaagcagtggactcatgaaacccagacagaaccgttgtcttgcagctataaacctctaccggtgctttcatct actttgctcaaaatagtgaaacctaacaatgccctgtgtgcaacagagagagatgtggtggttgtggatgacagtgagga ggaacgggaagcagtgccaccatgctcaaggggcatctttgtagaatctttggaggtaagaactccaaatgccagaaatc cattgaaggcctctgtgcacatgtttgacatgcaggacaatcaccctgtgaatgttgctagtagtgtagctaattcagca gccatgttccattttggagtgggagatttgctactgcacaactctcagaattggcctggaaaagactctgacagcaatga agctcttcctgcctgctcaagtttgtcagcttccattcctgttccaaagatttctgtcacagatcttgcctgccaagcca gggacatctcttgcgtttctccattcatgcccttgccaccttattcaagtatggacaccccagagttgaagaaggaattg agcagatttggtgtccgtgctctcccaaagcggcagatggttttaaaactgaaggaaatttttcaatttactcgccaaca ggcaggaaccgactgtaagaaaaaatctatgccagttgctaccagttcttttcagaaactgcagcaaaaatgtcttcccc cttatcgactgcttcaggggaacccaaatacaactaaccttacagatctttctgaaggaggcgctcagaggccagaggct ggacttgggtggccaaagagagctgcttttcctgcaaagagattaactgatggagagggcaatggagatctaatcctgac aacttctcaagtgtcagctggcacaacaggagctggaaatgagacttatgcagcatctcaaagttcatctgtgaagttta aaatcagcatgctgtcagagaaagaggaaaatgtaccagcctctcagattgccgctagtggtgagggtcagcaactggaa ttcttgaagcactatattcattccaacccatctctttgccagcaaattctgctgtatcagcccattgaactttctgtact gcatgcagaactgaagcaaaatggcataaggatttcattggacaagttactggactttttggatgcaaactgcatcacgt ttaccactgcagaagctcggagagaaaaacaacacctccatagatccaagagaaagggacaaaggtgatgctaagccctt tggatattctcccaaaatgtgaactcctggagattttttcctctgcaactttctagtcacctgcctcttctcctttttca tgattatgtatttttctttgctcaatccttttttcgggggaaataatctgtgttggggtttgaagtcagagttggtcact tgcaacagctgttctcagccttgcatccaatcctgaggaatgatttcagcatacatgttgggacaacctgttgaggccta gaagtatctttggcatatccttaccctgatggctggctgatggagggaaaaacatactccttcatttgcaaagataactt tcaagtttatgtcacctgagactaccacccaagtaatttattacaaaattgtctcccaggaggtgttgtagtgtaaaaaa atgcaaaactgggaagaagagagcaagatgatgtgatgtgagagggcagcatttttactgaacacactataaattcttgc ttctcaaagattttggaggacgtcttcttatagactgcttaaattatacaattgatttcatttcttacctccccccatta aaaaaagcaagaaattattttatgtactaaatgtgaacatttttttaagtatcattggtcccacattgcaatttttttaa ctgttgctacccagagtgatgtatataagatgggcagccatgtttattaaataaatgttaaaattatgtcatgccct |
|
| Transcript ID | habu1_s2789_g10040.t2 |
| Definition | - |
>habu1_s2789_g10040.t2 caggcagcagggggcgctcgcgcggcgacgggaaggcggagcctgcgcagctgcgccgacaaaatgggcgactcggagga cgagccggacgaggcccgccgaggactcgaggcccgagcggccctgctgctctcggaggccccagccgcgccccgcacgc ccccgctgcccgccagccgttgggacgggggcccggcggcaagcccggccggctggctgtgggagttgagctcgttgacg ggcgccccggccgtcaccccttggggggccaatcagaggccggagttccgcgcgcctggtgccccaacggagtctccgga gacggagcgtttcccaagcagagccggtgaatgctgcgaaggcggccgtccgagggatgccgataccttgcaagatctcg tggagttggccggggaaggactcacgttcacccagtggagccttgatattgggcggcctgagcccccggagcaagaacag atgccaggtgttcagcaaaaggcttttactcggttattggagaagcagcagcagcagcagcagcagcaactattccaaaa ttgctcttatgaaaaattccctcttggctcactggctgttgccttcaaggagatggtcaataatcctcatttgagcgata tccagatccaggtggacagtggggaagtcttctatgcccatatgtttgtattgtatgcacggtgtcctcagcttttacaa tttgttgaccacagatgttttgtcgtggctgaagaaggagaagtcagagcctcccgtgtgctgttacatgatgctccagg ggatgctgttgctctgttcttgaagtacctttacacagctgaacatttcgtacctcaacatttgctgtcagatgtggttg acctggcaataaggtttggagtgaaagaattggcggttctgtgtgaaggccaatctagtgaagagatatctgtagaaaag ccagtggatgataaagacaaagttggaaattttgaggaacttttgaaatccatgtggcaagatgaagaaaccgcagcaaa atctgtatgcagagatgaaatcaatgacagtatgaatgagcaggaactagaggagatttatgagtttgtggctactcagc gcagaatgacctctgatgaagcgaggaaggaaaaggtctgcactgaatgcagatatgatgaagtggaaaagaagattagc caaattggtgcttcttgcccaagaaaagcactggagaagcccagaagagccatgacaattaaggaaggtgaaataaaata tgatctagagtcatccaaattgaaaacctctaatgccagcatggaaaaagatctgaaaaagtattctgttgagttccagc tggattttaaggaaacagtgtcctttggagcaagtactagaaaagaacctacaatactggattctgatgaagagctggaa caggaggcagaaaagaaacaggcagaggccgcttcaagcttctctgagcaacaatcatggcataaagtgagcgctgttgc caacatgaactgctggagcccatctcctccccagcaggatgtagagagagatgtggtggttgtggatgacagtgaggagg aacgggaagcagtgccaccatgctcaaggggcatctttgtagaatctttggagaattggcctggaaaagactctgacagc aatgaagctcttcctgcctgctcaagtttgtcagcttccattcctgttccaaagatttctgtcacagatcttgcctgcca agccagggacatctcttgcgtttctccattcatgcccttgccaccttattcaagtatggacaccccagagttgaagaagg aattgagcagatttggtgtccgtgctctcccaaagcggcagatggttttaaaactgaaggaaatttttcaatttactcgc caacaggcaggaaccgactgtaagaaaaaatctatgccagttgctaccagttcttttcagaaactgcagcaaaaatgtct tcccccttatcgactgcttcaggggaacccaaatacaactaaccttacagatctttctgaaggaggcgctcagaggccag aggctggacttgggtggccaaagagagctgcttttcctgcaaagagattaactgatggagagggcaatggagatctaatc ctgacaacttctcaagtgtcagctggcacaacaggagctggaaatgagacttatgcagcatctcaaagttcatctgtgaa gtttaaaatcagcatgctgtcagagaaagaggaaaatgtaccagcctctcagattgccgctagtggtgagggtcagcaac tggaattcttgaagcactatattcattccaacccatctctttgccagcaaattctgctgtatcagcccattgaactttct gtactgcatgcagaactgaagcaaaatggcataaggatttcattggacaagttactggactttttggatgcaaactgcat cacgtttaccactgcagaagctcggagagaaaaacaacacctccatagatccaagagaaagggacaaaggtgatgctaag ccctttggatattctcccaaaatgtgaactcctggagattttttcctctgcaactttctagtcacctgcctcttctcctt tttcatgattatgtatttttctttgctcaatccttttttcgggggaaataatctgtgttggggtttgaagtcagagttgg tcacttgcaacagctgttctcagccttgcatccaatcctgaggaatgatttcagcatacatgttgggacaacctgttgag gcctagaagtatctttggcatatccttaccctgatggctggctgatggagggaaaaacatactccttcatttgcaaagat aactttcaagtttatgtcacctgagactaccacccaagtaatttattacaaaattgtctcccaggaggtgttgtagtgta aaaaaatgcaaaactgggaagaagagagcaagatgatgtgatgtgagagggcagcatttttactgaacacactataaatt cttgcttctcaaagattttggaggacgtcttcttatagactgcttaaattatacaattgatttcatttcttacctccccc cattaaaaaaagcaagaaattattttatgtactaaatgtgaacatttttttaagtatcattggtcccacattgcaatttt tttaactgttgctacccagagtgatgtatataagatgggcagccatgtttattaaataaatgttaaaattatgtcatgcc ct |
|
Protein
| Protein ID | habu1_s2789_g10040.t1 |
|---|---|
| Definition | - |
>habu1_s2789_g10040.t1 MGDSEDEFRLRIPPGRRRPRRTGTAAAPAAGPPPLPPGRGLKRGGAPSTARPAGGKRRRAAGGETLEAAAGPDEARRGLE ARAALLLSEAPAAPRTPPLPASRWDGGPAASPAGWLWELSSLTGAPAVTPWGANQRPEFRAPGAPTESPETERFPSRAGE CCEGGRPRDADTLQDLVELAGEGLTFTQWSLDIGRPEPPEQEQMPGVQQKAFTRLLEKQQQQQQQQLFQNCSYEKFPLGS LAVAFKEMVNNPHLSDIQIQVDSGEVFYAHMFVLYARCPQLLQFVDHRCFVVAEEGEVRASRVLLHDAPGDAVALFLKYL YTAEHFVPQHLLSDVVDLAIRFGVKELAVLCEGQSSEEISVEKPVDDKDKVGNFEELLKSMWQDEETAAKSVCRDEINDS MNEQELEEIYEFVATQRRMTSDEARKEKVCTECRYDEVEKKISQIGASCPRKALEKPRRAMTIKEGEIKYDLESSKLKTS NASMEKDLKKYSVEFQLDFKETVSFGASTRKEPTSEIHLGLDMDSTHSNHLERSATQFSVSEMKCSLWKQNINIANNETT TRNFPRLFQASAKDLQITLSRDLKAPLITSASQPNILDRLPYQNGKQENVNRKGEAPIGNLEKSGVVNPHELNITSDHIV VLDSDEELEQEAEKKQAEAASSFSEQQSWHKVSAVANMNCWSPSPPQQDVGKVAGGLDTLICNEVQSLDESHQPLNLSNH KEGSFWEGLDRSEGRTLVVPKTPLPAWNSLDDMQVEKSRLNSSLKKQWTHETQTEPLSCSYKPLPVLSSTLLKIVKPNNA LCATERDVVVVDDSEEEREAVPPCSRGIFVESLEVRTPNARNPLKASVHMFDMQDNHPVNVASSVANSAAMFHFGVGDLL LHNSQNWPGKDSDSNEALPACSSLSASIPVPKISVTDLACQARDISCVSPFMPLPPYSSMDTPELKKELSRFGVRALPKR QMVLKLKEIFQFTRQQAGTDCKKKSMPVATSSFQKLQQKCLPPYRLLQGNPNTTNLTDLSEGGAQRPEAGLGWPKRAAFP AKRLTDGEGNGDLILTTSQVSAGTTGAGNETYAASQSSSVKFKISMLSEKEENVPASQIAASGEGQQLEFLKHYIHSNPS LCQQILLYQPIELSVLHAELKQNGIRISLDKLLDFLDANCITFTTAEARREKQHLHRSKRKGQR |
|
| Protein ID | habu1_s2789_g10040.t2 |
| Definition | - |
>habu1_s2789_g10040.t2 MGDSEDEPDEARRGLEARAALLLSEAPAAPRTPPLPASRWDGGPAASPAGWLWELSSLTGAPAVTPWGANQRPEFRAPGA PTESPETERFPSRAGECCEGGRPRDADTLQDLVELAGEGLTFTQWSLDIGRPEPPEQEQMPGVQQKAFTRLLEKQQQQQQ QQLFQNCSYEKFPLGSLAVAFKEMVNNPHLSDIQIQVDSGEVFYAHMFVLYARCPQLLQFVDHRCFVVAEEGEVRASRVL LHDAPGDAVALFLKYLYTAEHFVPQHLLSDVVDLAIRFGVKELAVLCEGQSSEEISVEKPVDDKDKVGNFEELLKSMWQD EETAAKSVCRDEINDSMNEQELEEIYEFVATQRRMTSDEARKEKVCTECRYDEVEKKISQIGASCPRKALEKPRRAMTIK EGEIKYDLESSKLKTSNASMEKDLKKYSVEFQLDFKETVSFGASTRKEPTILDSDEELEQEAEKKQAEAASSFSEQQSWH KVSAVANMNCWSPSPPQQDVERDVVVVDDSEEEREAVPPCSRGIFVESLENWPGKDSDSNEALPACSSLSASIPVPKISV TDLACQARDISCVSPFMPLPPYSSMDTPELKKELSRFGVRALPKRQMVLKLKEIFQFTRQQAGTDCKKKSMPVATSSFQK LQQKCLPPYRLLQGNPNTTNLTDLSEGGAQRPEAGLGWPKRAAFPAKRLTDGEGNGDLILTTSQVSAGTTGAGNETYAAS QSSSVKFKISMLSEKEENVPASQIAASGEGQQLEFLKHYIHSNPSLCQQILLYQPIELSVLHAELKQNGIRISLDKLLDF LDANCITFTTAEARREKQHLHRSKRKGQR |
|