Gene
| Gene Model ID | habu1_s2857_g10170 |
|---|---|
| Locus | habu1_scaffold2857 : 9045 ... 22105 : - |
| To GenomeBrowser | habu1_scaffold2857:9045..22105 |
| Genes list of scaffold | habu1_scaffold2857 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2857_g10170.t3 | 1 | 1 | Synaptobrevin | 13 | 56 | 5.8e-13 | 48.2 | 5.3e-17 | 7.9e-13 | 47.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2857_g10170.t3 | gi|641778279|ref|XP_008172148.1| | PREDICTED: vesicle-associated membrane protein 8 [Chrysemys picta bellii] | 2.0e-24 |
| habu1_s2857_g10170.t3 | gi|591350952|ref|XP_007069928.1| | PREDICTED: vesicle-associated membrane protein 8 [Chelonia mydas] | 1.0e-23 |
| habu1_s2857_g10170.t3 | gi|637378799|ref|XP_003230604.2| | PREDICTED: vesicle-associated membrane protein 8 [Anolis carolinensis] | 1.0e-22 |
| habu1_s2857_g10170.t3 | gi|73980368|ref|XP_852312.1| | PREDICTED: vesicle-associated membrane protein 8 isoform 2 [Canis lupus familiaris] | 3.0e-22 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 29.9 |
| Venom grand-1 | 60.6 |
| Pit, infrared sensing | 25.5 |
| Nose | 45.9 |
| Brain-1 | 5.4 |
| Eye | 20.0 |
| fetal fibroblast | 3.7 |
| venom gland-2 | 97.0 |
| Brain-2 | 6.7 |
| Spleen | 30.9 |
| Lung | 29.9 |
| Liver | 40.3 |
| Kidney | 66.5 |
| Pancreas | 39.8 |
| Small intestine | 111.1 |
| Large intestine | 73.2 |
| Stomach | 62.0 |
| heart | 6.1 |
| ovary | 67.7 |
| cheek muscle | 8.5 |
Transcript
| Transcript ID | habu1_s2857_g10170.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10170.t1 actctcgaggcttgaacgggactccacggccatggagggaggcaatggaagtggcccagggatggccaatgaccgggtga agaacctccagaatgaagttgagggtgtcaagaacatcatgacacagaatgtggagcggattctagcaaggggtgagaac cttgaccatctgcgcaacaagacggaagacctggaagcaacgtcggaacacttcaagacaacctcacaaaaagtggcccg gaagtactggtggaagaatatcaagatgattgccataatctgcatcattgctgtcatcatccttattctcatcatcctgc ttgccaccggcgtcattccgtcttaagtttctttcctaccactggacttttcctggtcatcattcccactttttttttat tttgcccccatcatcccctcctttaacatctgaaattcgtaagatcctttgccagatcaagaggtccaggttacctcgct gcaggatctgccagtctccccaacctccctcccatgtcaggaccaaaagcatcccagctccaggagtcgcactctctctt ggttctacgcagggtccctcagctgtacgtgttaatgtagcaagaggaagcagagactgtttctgttagatgatccccac ccagcagagcacgctaaaattctgattctgccagtgcctcagctgctgcttggagcaaagctcacccacttcgccattcc ctctggaatgggcagtggagctgctggggaaggatcccaaccttatgtgccactctgggtattccttctcttccacgaga tcctcagatctctttgatttgcatgcctaacatcatcctggatggagaagaagtgatttactaaaactcacctggcaatg taaaggagagatgcttttgaaatactgtttaaatgaagaagggtggccagttcaggttctctaaatttttatttctctct cgggaaagttagctctttaagatgtcaattctgaggtcctgactcctccaattgggacccctgagtggcatggagagaag cggctcctctgatgagcttcattccctttaactggcatgtagtcttctttcagctacggcctttccaatccagtgcctct gatctttgaggaatctctaggagatgtttattcacttttgcatttgatttactaacagtaataaaagtatttataaatca ctggcta |
|
| Transcript ID | habu1_s2857_g10170.t2 |
| Definition | - |
>habu1_s2857_g10170.t2 actctcgaggcttgaacgggactccacggccatggagggaggcaatggaagtggcccagggatggccaatgaccgggtga agaacctccagaatgaagttgagggtgtcaagaacatcatgacacagaatgtggagcggattctagcaaggggtgagaac cttgaccatctgcgcaacaagacggaagacctggaagcaacgtcggaacacttcaagacaacctcacaaaaagtggcccg gaagtactggtggaagaatatcaagatgattgccataatctgcatcattgctgtcatcatccttattctcatcatcctgc ttgccaccggcgtcattccgtcttaagtttctttcctaccactggacttttcctggtcatcattcccactttttttttat tttgcccccatcatcccctcctttaacatctgaaattcgtaagatcctttgccagatcaagag |
|
| Transcript ID | habu1_s2857_g10170.t3 |
| Definition | - |
>habu1_s2857_g10170.t3 actctcgaggcttgaacgggactccacggccatggagggaggcaatggaagtggcccagggatggccaatgaccgggtga agaacctccagaatgaagttgagggtgtcaagaacatcatgacacagaatgtggagcggattctagcaaggggtgagaac cttgaccatctgcgcaacaagacggaagacctggaagcaacgagaatcagacgaccacctcatctctgtgacagcccctc aagttatcacattactcctaaaccttctgtttgttgggctaaagctggatggaattcccgtttgaacaaactcactatgt ttgcacactatatttaagcttcattatttaatcgagccattttgtgggttcacatattatattgaaaagccatatctgca caatatactaagacagaggtaatcaagattagtatcttgcataaatgcaggcagtagatctttaattgacatggttgatt gtgtttcatgaacacagaccctgttttgcttctgggctaataacatttttttttaaagatggtaacaacttcttacagtg ccctggtgtgcatgcagaagtcaccctgcatgctcgccaagcgtgtaaaggagcacttgctttgcttgggtaagagttgg tattctcttttctctttttttctctgcaccttctacttttatattttttttagtttgcatttttttactatgatagttgt aattttaataaaattgctattaagaaaaagtttt |
|
Protein
| Protein ID | habu1_s2857_g10170.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10170.t1 MEGGNGSGPGMANDRVKNLQNEVEGVKNIMTQNVERILARGENLDHLRNKTEDLEATSEHFKTTSQKVARKYWWKNIKMI AIICIIAVIILILIILLATGVIPS |
|
| Protein ID | habu1_s2857_g10170.t2 |
| Definition | - |
>habu1_s2857_g10170.t2 MEGGNGSGPGMANDRVKNLQNEVEGVKNIMTQNVERILARGENLDHLRNKTEDLEATSEHFKTTSQKVARKYWWKNIKMI AIICIIAVIILILIILLATGVIPS |
|
| Protein ID | habu1_s2857_g10170.t3 |
| Definition | - |
>habu1_s2857_g10170.t3 MEGGNGSGPGMANDRVKNLQNEVEGVKNIMTQNVERILARGENLDHLRNKTEDLEATRIRRPPHLCDSPSSYHITPKPSV CWAKAGWNSRLNKLTMFAHYI |
|