Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2857_g10173
Locus habu1_scaffold2857 : 45729 ... 59495 : -
To GenomeBrowser habu1_scaffold2857:45729..59495
Genes list of scaffold habu1_scaffold2857

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 13.6
Venom grand-1 15.6
Pit, infrared sensing 12.7
Nose 10.7
Brain-1 6.9
Eye 10.6
fetal fibroblast 22.8
venom gland-2 17.5
Brain-2 7.9
Spleen 14.1
Lung 16.1
Liver 35.8
Kidney 15.4
Pancreas 27.0
Small intestine 15.0
Large intestine 16.0
Stomach 15.5
heart 12.6
ovary 13.3
cheek muscle 9.9

Transcript
Transcript IDhabu1_s2857_g10173.t1
Definition-
>habu1_s2857_g10173.t1
ggggcagctccatctcccaggccaaaaagcacttttgcagaggagaggctgcagaggggagggctggccctctgctggtg
aagtggacagcagagggtcagcagagagagagagagagacgacctcatttggctcagctccacaccagccttccctggag
cactcccaagttattgaggtgggggagcagcttcttccgttgcattaggccaggggtaaccaatccccaggccatagccc
ggtactgcaccgcagcctgttgagaacggcagcgcaagcactcacgccacatgaaccaccagttgtgtgagtgggggtgc
acccactgcttccacaaatggggcttgacgcatgggcacaagtgcccaccgcttgaacaaatggagctgtgcatgcatga
gtgcctaccactcacatggaaccatttcctctctctccccccccctcactggttcacaaagccgggaaggttggggacca
ttgcataaggcaacagggttgaaagaaccggaagggaaggacttctgtttatgtttgggcccaaaagagaagcagggaga
gaggctcttgctcagatctaggcactttagcaacattaatatcagcaggtctggcataaaaagagcatttctgaaggaat
tgtggctctccttctgttgtcttttttccattcttggcatgcagggtgcaacagccaaaggttgactggcttcctgcctc
cagcctcatctcccactgcagccctaccaaaattaatgcatttttcccaccagctgctgatacttaaaaggggggcaagc
aggaagacggaggaatctattgatggctttacttacagtaattaggacactccccccacacacacacacattccagggat
aagccaggtcagagataggagcagaaatgggggcagcaaagttcatgctggttaatcttctgccagctcaagtatgggta
actgggtgatgagccaggtcctaaggggcacaatgtccgtaatgccgggtgcgcagccagcccaccccttgtggactggt
ccatgggtgctttgcttctgccctcttccaggctcagactctccttagttgctgcggcagacacgcagacgagctctctg
tggggcaccctggaggggccgttgacaaaccagaccggatgcacaaccacaacgctggaagatttcagggcctggcgccc
caccatccttctgccctcgcccggaacacacggccccttcgaggagaacagaagatctccacaaagcaacaccagaggca
ttgcctggacagctgtatcggacatccagttaggcggccattgccatacccagggctgtgtagacttcttatatccactg
tatatgtggtaagagcaacttacttaaaggcctgctacagacatttccatccatgaagaagaatcaaagttgccaggaga
catgaatggaggaagagaaggcaaaggaaagatggcggccatcagatgctggtggccaatgatttcttacagcctgaaga
ctcagctaatgacagaaacattgacttgcacagtttagatatcaagaacacacagacttttgcacaatataatttttaat
ttaaaaaatgagactcattttgtcttaatcacatgaaatgtagccagcccttttccttgtaaaactctaaagaaactgag
aatgcctatgggtttatgttgctaggcctgatctcaagtacggagtattatgggataggggctatgagtgaaggagagat
gcctcatgaccggagaagagatccttggctcagcatccgtagcaaacagaaatgccagaaagccgagagaggaaattcta
aaatccactgaggagcaaggcagctattaggaaatggccagccggaccggctttctggctggattcaaacattcctttct
ctcccacccacaagctgcttagctggccacatggcagcaaagaactgaaacccccttggcttattaaatcagtcctaata
aaggaactgccacagtatcctaaaagcagcccctctgcccaaatcctttctcgcagctgcgcagtgggatcatgaggccc
accaaagaaaagacaactgttttaaaagtgggatctttgatctccttccatcaaagagggattataattggtctggccag
ctgggcccacaaagtctgccctccctcttcctgcctgcaacattttctgcaagggtaagttctaccctctgtctagggca
ggagaggatcacgttggctcagaccccattcccccagtctcagaaagagggcatctggaagaggagtgggctctggctaa
gcaacagagggcgacttcttaggcctggctacatcccgctgcccttggcccacagaaagaccttcctgctcctggcggtg
gttgaggcagtgaggactttcagaggtctgagcgctccggcccctgcggtgccatctcctgctggctggcctcttgcatg
ttggcataggccacctcctgggccagctgagggaggggggggcggccccacaccaggttccgcagggagatgcaggtcat
caggaggctgtgggcaaaaccagggagaaactgtcaggaggagcacacaacacaatccaaactgagcttttttttgaaga
gcacaagagttgtaaaaatgcacatcccacacaaaagtctgctttagttttttttgctgatacccagactggagaagatg
atatttattggatttgcccacagttaggagttatgggagatttttatctattaatttacaggaaaggaagagatcatgaa
attgtttatacttggcatgaagagggtggaaagtcactttcttagtattttattttctattgttctttcattttctgttt
tcttgcaccctttattctggttttatatttttctttttttttagtttgtattatcttgtattactatttt
Transcript IDhabu1_s2857_g10173.t2
Definition-
>habu1_s2857_g10173.t2
ctatcaacattgttgaatgaatgtaggtcatgattcattgtcattatttttctggtcttcctatccagggcttttgattt
gttaatgtagccttacaatagccttacaataaagtagatttagctcatcaaattctgtctcctgtctggtttaggtttac
ctgggaggctgatataatcttgcaagtctgaaggtacaaacgtgctgcttttaacatcgagttttttaacagtcaaatca
gttaggttaggcccttcttaagtttctttctctgacacccgggaactcctctgtcttgcttgtttgattgttccttaggc
agcatatcgtttcctcctctgccaaggtcatccacacattccattagacatgctctttctgaatgcatctcttatccctt
gttctacctttgtttaaaggaatgattgctctttttgaagcagctgacaagaaagtgttgcttgatgcaatgagagagcg
cttccccacttcaccttgcatctctcacccccatatctaccagactgttttttcaggatacatctaagcacagatttagt
gctattccaaaatgacattaacctcaggtctaaaagcagaatacatgtgcaaacctagaactctttcccagccccaattc
ccacgttaggaagattggttggtgcatgtatctgccccccacccttcatcagatgactgatacagtatgggaaacaaaat
aaagcctctacccatcctttaacttatcccagagtatttacatttacatctcctttatctgctgcacccctgaaatagcc
tggggcttggcaattggaataatcaaatttgtatcatcctattcttcagtgggttcgagtactggaggaaagctcatgaa
cagagcggcgaggaagaacccaatgtttgataaggatgatcccagcttccattccattacaggctcagactctccttagt
tgctgcggcagacacgcagacgagctctctgtggggcaccctggaggggccgttgacaaaccagaccggatgcacaacca
caacgctggaagatttcagggcctggcgccccaccatccttctgccctcgcccggaacacacggccccttcgaggagaac
aggtttgcagatcttggcccagaagtggcgggcacagcagtgcccttgggcgcagtcggaggtgcggaggcagcgctctc
ccgtgccagctgtgagaggcaaacagtgatcagctctttcagaagcaaaccctggttctggaggctgcattgctgggtga
cagtgaggttgaatggcgccagaggcagatacagctgggtgacgtccggagaccagccacttcattgggcagccagtccc
tccttgcaggtggcacggcaacagtgcccccctcccgcactgtgacatggactagtctaccatgcggggcagtggttgag
aaaggaaatctgggtttccccatcgcagctcctagaagaccaccaccactgtcccaccatctggcctgggccctcctcgt
ggaggtggcaagggccactcctactgaatcaacctttggacacatgccttggggggctgccggtgttccccgccagctct
ccacagccaaagaatagttctgcatcagatgaggaaaagggccatctacccaccagggatttccaccccctgcagcgcat
catttctttccctgcaggaaagactggcgatgctgccacggcaaaccctcctttgctttctcctagaagagggtcagcca
cttttgggagtgtggaggttgcagctctgcctctccacctctcagggggccgaaagtgaagatgtttctggaaagaatga
gaagatctccacaaagcaacaccagaggcattgcctggacagctgtatcggacatccagttaggcggccattgccatacc
cagggctgtgtagacttcttatatccactgtatatgtggtaagagcaacttacttaaaggcctgctacagacatttccat
ccatgaagaagaatcaaagttgccaggagacatgaatggaggaagagaaggcaaaggaaagatggcggccatcagatgct
ggtggccaatgatttcttacagcctgaagactcagctaatgacagaaacattgacttgcacagtttagatatcaagaaca
Transcript IDhabu1_s2857_g10173.t3
Definition-
>habu1_s2857_g10173.t3
ctatcaacattgttgaatgaatgtaggtcatgattcattgtcattatttttctggtcttcctatccagggcttttgattt
gttaatgtagccttacaatagccttacaataaagtagatttagctcatcaaattctgtctcctgtctggtttaggtttac
ctgggaggctgatataatcttgcaagtctgaaggtacaaacgtgctgcttttaacatcgagttttttaacagtcaaatca
gttaggttaggcccttcttaagtttctttctctgacacccgggaactcctctgtcttgcttgtttgattgttccttaggc
agcatatcgtttcctcctctgccaaggtcatccacacattccattagacatgctctttctgaatgcatctcttatccctt
gttctacctttgtttaaaggaatgattgctctttttgaagcagctgacaagaaagtgttgcttgatgcaatgagagagcg
cttccccacttcaccttgcatctctcacccccatatctaccagactgttttttcaggatacatctaagcacagatttagt
gctattccaaaatgacattaacctcaggtctaaaagcagaatacatgtgcaaacctagaactctttcccagccccaattc
ccacgttaggaagattggttggtgcatgtatctgccccccacccttcatcagatgactgatacagtatgggaaacaaaat
aaagcctctacccatcctttaacttatcccagagtatttacatttacatctcctttatctgctgcacccctgaaatagcc
tggggcttggcaattggaataatcaaatttgtatcatcctattcttcagtgggttcgagtactggaggaaagctcatgaa
cagagcggcgaggaagaacccaatgtttgataaggatgatcccagcttccattccattacaggtgaagttacgtggtcag
cataaatgtaaatcaggctcagactctccttagttgctgcggcagacacgcagacgagctctctgtggggcaccctggag
gggccgttgacaaaccagaccggatgcacaaccacaacgctggaagatttcagggcctggcgccccaccatccttctgcc
ctcgcccggaacacacggccccttcgaggagaacaggtttgcagatcttggcccagaagtggcgggcacagcagtgccct
tgggcgcagtcggaggtgcggaggcagcgctctcccgtgccagctgtgagaggcaaacagtgatcagctctttcagaagc
aaaccctggttctggaggctgcattgctgggtgacagtgaggttgaatggcgccagaggcagatacagctgggtgacgtc
cggagaccagccacttcattgggcagccagtccctccttgcaggtggcacggcaacagtgcccccctcccgcactgtgac
atggactagtctaccatgcggggcagtggttgagaaaggaaatctgggtttccccatcgcagctcctagaagaccaccac
cactgtcccaccatctggcctgggccctcctcgtggaggtggcaagggccactcctactgaatcaacctttggacacatg
ccttggggggctgccggtgttccccgccagctctccacagccaaagaatagttctgcatcagatgaggaaaagggccatc
tacccaccagggatttccaccccctgcagcgcatcatttctttccctgcaggaaagactggcgatgctgccacggcaaac
cctcctttgctttctcctagaagagggtcagccacttttgggagtgtggaggttgcagctctgcctctccacctctcagg
gggccgaaagtgaagatgtttctggaaagaatgagaagatctccacaaagcaacaccagaggcattgcctggacagctgt
atcggacatccagttaggcggccattgccatacccagggctgtgtagacttcttatatccactgtatatgtggtaagagc
aacttacttaaaggcctgctacagacatttccatccatgaagaagaatcaaagttgccaggagacatgaatggaggaaga
gaaggcaaaggaaagatggcggccatcagatgctggtggccaatgatttcttacagcctgaagactcagctaatgacaga
aacattgacttgcacagtttagatatcaagaaca
Transcript IDhabu1_s2857_g10173.t4
Definition-
>habu1_s2857_g10173.t4
agcgcaagcactcacgccacatgaaccaccagttgtgtgagtgggggtgcacccactgcttccacaaatggggcttgacg
catgggcacaagtgcccaccgcttgaacaaatggagctgtgcatgcatgagtgcctaccactcacatggaaccatttcct
ctctctccccccccctcactggttcacaaagccgggaaggttggggaccattgcataaggcaacagggttgaaagaaccg
gaagggaaggacttctgtttatgtttgggcccaaaagagaagcagggagagaggctcttgctcagatctaggcactttag
caacattaatatcagcaggtctggcataaaaagagcatttctgaaggaattgtggctctccttctgttgtcttttttcca
ttcttggcatgcagggtgcaacagccaaaggttgactggcttcctgcctccagcctcatctcccactgcagccctaccaa
aattaatgcatttttcccaccagctgctgatacttaaaaggggggcaagcaggaagacggaggaatctattgatggcttt
acttacagtaattaggacactccccccacacacacacacattccagggataagccaggtcagagataggagcagaaatgg
gggcagcaaagttcatgctggttaatcttctgccagctcaagtatgggtaactgggtgatgagccaggtcctaaggggca
caatgtccgtaatgccgggtgcgcagccagcccaccccttgtggactggtccatgggtgctttgcttctgccctcttcca
ggctcagactctccttagttgctgcggcagacacgcagacgagctctctgtggggcaccctggaggggccgttgacaaac
cagaccggatgcacaaccacaacgctggaagatttcagggcctggcgccccaccatccttctgccctcgcccggaacaca
cggccccttcgaggagaacaggaaagactggcgatgctgccacggcaaaccctcctttgctttctcctagaagagggtca
gccacttttgggagtgtggaggttgcagctctgcctctccacctctcagggggccgaaagtgaagatgtttctggaaaga
atgagaagatctccacaaagcaacaccagaggcattgcctggacagctgtatcggacatccagttaggcggccattgcca
tacccagggctgtgtagacttcttatatccactgtatatgtggtaagagcaacttacttaaaggcctgctacagacattt
ccatccatgaagaagaatcaaagttgccaggagacatgaatggaggaagagaaggcaaaggaaagatggcggccatcaga
tgctggtggccaatgatttcttacagcctgaagactcagctaatgacagaaacattgacttgcacagtttagatatcaag
aaca
Transcript IDhabu1_s2857_g10173.t5
Definition-
>habu1_s2857_g10173.t5
agcgcaagcactcacgccacatgaaccaccagttgtgtgagtgggggtgcacccactgcttccacaaatggggcttgacg
catgggcacaagtgcccaccgcttgaacaaatggagctgtgcatgcatgagtgcctaccactcacatggaaccatttcct
ctctctccccccccctcactggttcacaaagccgggaaggttggggaccattgcataaggcaacagggttgaaagaaccg
gaagggaaggacttctgtttatgtttgggcccaaaagagaagcagggagagaggctcttgctcagatctaggcactttag
caacattaatatcagcaggtctggcataaaaagagcatttctgaaggaattgtggctctccttctgttgtcttttttcca
ttcttggcatgcagggtgcaacagccaaaggttgactggcttcctgcctccagcctcatctcccactgcagccctaccaa
aattaatgcatttttcccaccagctgctgatacttaaaaggggggcaagcaggaagacggaggaatctattgatggcttt
acttacagtaattaggacactccccccacacacacacacattccagggataagccaggtcagagataggagcagaaatgg
gggcagcaaagttcatgctggttaatcttctgccagctcaagtatgggtaactgggtgatgagccaggtcctaaggggca
caatgtccgtaatgccgggtgcgcagccagcccaccccttgtggactggtccatgggtgctttgcttctgccctcttcca
ggctcagactctccttagttgctgcggcagacacgcagacgagctctctgtggggcaccctggaggggccgttgacaaac
cagaccggatgcacaaccacaacgctggaagatttcagggcctggcgccccaccatccttctgccctcgcccggaacaca
cggccccttcgaggagaacaggtttgcagatcttggcccagaagtggcgggcacagcagtgcccttgggcgcagtcggag
gtgcggaggcagcgctctcccgtgccagctgtgagaggcaaacagtgatcagctctttcagaagcaaaccctggttctgg
aggctgcattgctgggtgacagtgaggttgaatggcgccagaggcagatacagctgggtgacgtccggagaccagccact
tcattgggcagccagtccctccttgcaggtggcacggcaacagtgcccccctcccgcactgtgacatggactagtctacc
atgcggggcagtggttgagaaaggaaatctgggtttccccatcgcagctcctagaagaccaccaccactgtcccaccatc
tggcctgggccctcctcgtggaggtggcaagggccactcctactgaatcaacctttggacacatgccttggggggctgcc
ggtgttccccgccagctctccacagccaaagaatagttctgcatcagatgaggaaaagggccatctacccaccagggatt
tccaccccctgcagcgcatcatttctttccctgcaggaaagactggcgatgctgccacggcaaaccctcctttgctttct
cctagaagagggtcagccacttttgggagtgtggaggttgcagctctgcctctccacctctcagggggccgaaagtgaag
atgtttctggaaagaatgagaagatctccacaaagcaacaccagaggcattgcctggacagctgtatcggacatccagtt
aggcggccattgccatacccagggctgtgtagacttcttatatccactgtatatgtggtaagagcaacttacttaaaggc
ctgctacagacatttccatccatgaagaagaatcaaagttgccaggagacatgaatggaggaagagaaggcaaaggaaag
atggcggccatcagatgctggtggccaatgatttcttacagcctgaagactcagctaatgacagaaacattgacttgcac
agtttagatatcaagaaca

Protein
Protein IDhabu1_s2857_g10173.t1
Definition-
>habu1_s2857_g10173.t1
MGALLLPSSRLRLSLVAAADTQTSSLWGTLEGPLTNQTGCTTTTLEDFRAWRPTILLPSPGTHGPFEENRRSPQSNTRGI
AWTAVSDIQLGGHCHTQGCVDFLYPLYMW
Protein IDhabu1_s2857_g10173.t2
Definition-
>habu1_s2857_g10173.t2
MLPRQTLLCFLLEEGQPLLGVWRLQLCLSTSQGAESEDVSGKNEKISTKQHQRHCLDSCIGHPVRRPLPYPGLCRLLIST
VYVVRATYLKACYRHFHP
Protein IDhabu1_s2857_g10173.t3
Definition-
>habu1_s2857_g10173.t3
MLPRQTLLCFLLEEGQPLLGVWRLQLCLSTSQGAESEDVSGKNEKISTKQHQRHCLDSCIGHPVRRPLPYPGLCRLLIST
VYVVRATYLKACYRHFHP
Protein IDhabu1_s2857_g10173.t4
Definition-
>habu1_s2857_g10173.t4
MHNHNAGRFQGLAPHHPSALARNTRPLRGEQERLAMLPRQTLLCFLLEEGQPLLGVWRLQLCLSTSQGAESEDVSGKNEK
ISTKQHQRHCLDSCIGHPVRRPLPYPGLCRLLISTVYVVRATYLKACYRHFHP
Protein IDhabu1_s2857_g10173.t5
Definition-
>habu1_s2857_g10173.t5
MRKRAIYPPGISTPCSASFLSLQERLAMLPRQTLLCFLLEEGQPLLGVWRLQLCLSTSQGAESEDVSGKNEKISTKQHQR
HCLDSCIGHPVRRPLPYPGLCRLLISTVYVVRATYLKACYRHFHP

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Okinawa Institute of Science and Technology
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