Gene
| Gene Model ID | habu1_s2857_g10174 |
|---|---|
| Locus | habu1_scaffold2857 : 58508 ... 76305 : - |
| To GenomeBrowser | habu1_scaffold2857:58508..76305 |
| Genes list of scaffold | habu1_scaffold2857 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| dna polymerase beta | EC:2.7.7.7 GO:0003677 GO:0003887 GO:0005634 GO:0005737 GO:0005876 GO:0006260 GO:0006284 GO:0008017 GO:0008630 GO:0016829 GO:0019899 GO:0042575 GO:0045298 GO:0051402 GO:0071897 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2857_g10174.t2 | 1 | 1 | HHH_8 | 12 | 77 | 2.7e-20 | 72.3 | 8.2e-22 | 9.4e-19 | 67.3 |
| habu1_s2857_g10174.t2 | 1 | 1 | DNA_pol_lambd_f | 97 | 147 | 3.2e-21 | 74.5 | 8.1e-24 | 9.2e-21 | 73.1 |
| habu1_s2857_g10174.t2 | 1 | 1 | HHH_5 | 99 | 131 | 5.9e-10 | 39.1 | 6.2e-11 | 7.1e-08 | 32.5 |
| habu1_s2857_g10174.t2 | 1 | 1 | DNA_pol_B_palm | 149 | 262 | 3.8e-39 | 133.2 | 7.40026e-42 | 8.5e-39 | 132.0 |
| habu1_s2857_g10174.t2 | 1 | 1 | DNA_pol_B_thumb | 269 | 334 | 8.2e-19 | 67.0 | 1.4e-21 | 1.6e-18 | 66.1 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 27.0 |
| Venom grand-1 | 79.1 |
| Pit, infrared sensing | 30.9 |
| Nose | 23.5 |
| Brain-1 | 14.6 |
| Eye | 26.7 |
| fetal fibroblast | 60.1 |
| venom gland-2 | 73.4 |
| Brain-2 | 15.9 |
| Spleen | 33.4 |
| Lung | 30.1 |
| Liver | 97.9 |
| Kidney | 99.0 |
| Pancreas | 61.7 |
| Small intestine | 74.0 |
| Large intestine | 45.4 |
| Stomach | 96.7 |
| heart | 76.8 |
| ovary | 51.2 |
| cheek muscle | 121.4 |
Transcript
| Transcript ID | habu1_s2857_g10174.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10174.t1 ggccggccccgccggtcctcccgcgccccgatgagcaagcgcaaggcgccgcaggagaaccccaaccaggccatcaccga cctcctcagcgaattggccaactatgaaaagaatgtgaatagagctattcataaatacaatgcttacaggaaagcagcat ctgtaatatccaagtaccctagcaagataaaaagtgggtccgaagcaaagaaattggatggcgtaggaactaaaattgct gaaaagatcgatgaatttttatctactggaaaattacgtaagatagaaaagattcgacaagatgacacaagctcttctat caatttactgaccagagttagtggcataggtcctgctgctgcgaggaaactagtagatgaaggtattaaaacattggaag atttaaagaaaaatgaacataaattgaatcatcaccaacgcattggattaaaatacttcaaagactttgaaaaaagaatt cctaggaaggagatgcttgaaatgcaggacgttgtattgagtgaagtgaagaaagtagaccctgcctacattgctactgt ttgtggcagttttcgccgaggtgcagaatccagtggagatatggatatcctgctgacacacccagacttcacttcagaat ctgccaagaagccaaagcttttgcatcaagttgtggagcagctggaaagcattcgctttgttacagacacactctcaaag ggagaaaccaaattcatgggtgtatgtcaactcccaagtagagatgatgacatcgtctatccatacaggagaattgatat caggctgattcccaaggaccagtattactgtggagtcctctacttcactggaagtgacctcttcaataagaacatgcgag cccacgccttggagatgggcttcaccctcaacgagtacacgatccggcctctcggcgtcactggagttgcgggggagcca ctccctgtggacagcgagaaggacatctttgactacctccagtggcagtaccgggagccgaaagagcggagtgaatagcc accagtccctggaagtgggttcgagtactggaggaaagctcatgaacagagcggcgaggaagaacccaatgtttgataag gatgatcccagcttccattccattacaggtgaagttacgtggtcagcataaatgtaaatcaggtaacacttttc |
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| Transcript ID | habu1_s2857_g10174.t2 |
| Definition | - |
>habu1_s2857_g10174.t2 ggccggccccgccggtcctcccgcgccccgatgagcaagcgcaaggcgccgcaggagaaccccaaccaggccatcaccga cctcctcagcgaattggccaactatgaaaagaatgtgaatagagctattcataaatacaatgcttacaggaaagcagcat ctgtaatatccaagtaccctagcaagataaaaagtgggtccgaagcaaagaaattggatggcgtaggaactaaaattgct gaaaagatcgatgaatttttatctactggaaaattacgtaagatagaaaagattcgacaagatgacacaagctcttctat caatttactgaccagagttagtggcataggtcctgctgctgcgaggaaactagtagatgaaggtattaaaacattggaag atttaaagaaaaatgaacataaattgaatcatcaccaacgcattggattaaaatacttcaaagactttgaaaaaagaatt cctaggaaggagatgcttgaaatgcaggacgttgtattgagtgaagtgaagaaagtagaccctgcctacattgctactgt ttgtggcagttttcgccgaggtgcagaatccagtggagatatggatatcctgctgacacacccagacttcacttcagaat ctgccaagaagccaaagcttttgcatcaagttgtggagcagctggaaagcattcgctttgttacagacacactctcaaag ggagaaaccaaattcatgggtgtatgtcaactcccaagtagagatgatgacatcgtctatccatacaggagaattgatat caggctgattcccaaggaccagtattactgtggagtcctctacttcactggaagtgacctcttcaataagaacatgcgag cccacgccttggagatgggcttcaccctcaacgagtacacgatccggcctctcggcgtcactggagttgcgggggagcca ctccctgtggacagcgagaaggacatctttgactacctccagtggcagtaccgggagccgaaagagcggagtgaatagcc accagtccctggaagggcttttgatttgttaatgtagccttacaatagccttacaataaagtagatttagctcatcaaat tctgtctcctgtctggtttaggtttacctgggaggctgatataatcttgcaagtctgaaggtacaaacgtgctgctttta acatcgagttttttaacagtcaaatcagttaggttaggcccttcttaagtttctttctctgacacccgggaactcctctg tcttgcttgtttgattgttccttaggcagcatatcgtttcctcctctgccaaggtcatccacacattccattagacatgc tctttctgaatgcatctcttatcccttgttctacctttgtttaaaggaatgattgctctttttgaagcagctgacaagaa agtgttgcttgatgcaatgagagagcgcttccccacttcaccttgcatctctcacccccatatctaccagactgtttttt caggatacatctaagcacagatttagtgctattccaaaatgacattaacctcaggtctaaaagcagaatacatgtgcaaa cctagaactctttcccagccccaattcccacgttaggaagattggttggtgcatgtatctgccccccacccttcatcaga tgactgatacagtatgggaaacaaaataaagcctctacccatcctttaacttatcccagagtatttacatttacatctcc tttatctgctgcacccctgaaatagcctggggcttggcaattggaataatcaaatttgtatcatcctattcttcagtggg ttcgagtactggaggaaagctcatgaacagagcggcgaggaagaacccaatgtttgataaggatgatcccagcttccatt ccattacaggtgaagttacgtggtcagcataaatgtaaatcaggtaacacttttc |
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Protein
| Protein ID | habu1_s2857_g10174.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10174.t1 MSKRKAPQENPNQAITDLLSELANYEKNVNRAIHKYNAYRKAASVISKYPSKIKSGSEAKKLDGVGTKIAEKIDEFLSTG KLRKIEKIRQDDTSSSINLLTRVSGIGPAAARKLVDEGIKTLEDLKKNEHKLNHHQRIGLKYFKDFEKRIPRKEMLEMQD VVLSEVKKVDPAYIATVCGSFRRGAESSGDMDILLTHPDFTSESAKKPKLLHQVVEQLESIRFVTDTLSKGETKFMGVCQ LPSRDDDIVYPYRRIDIRLIPKDQYYCGVLYFTGSDLFNKNMRAHALEMGFTLNEYTIRPLGVTGVAGEPLPVDSEKDIF DYLQWQYREPKERSE |
|
| Protein ID | habu1_s2857_g10174.t2 |
| Definition | - |
>habu1_s2857_g10174.t2 MSKRKAPQENPNQAITDLLSELANYEKNVNRAIHKYNAYRKAASVISKYPSKIKSGSEAKKLDGVGTKIAEKIDEFLSTG KLRKIEKIRQDDTSSSINLLTRVSGIGPAAARKLVDEGIKTLEDLKKNEHKLNHHQRIGLKYFKDFEKRIPRKEMLEMQD VVLSEVKKVDPAYIATVCGSFRRGAESSGDMDILLTHPDFTSESAKKPKLLHQVVEQLESIRFVTDTLSKGETKFMGVCQ LPSRDDDIVYPYRRIDIRLIPKDQYYCGVLYFTGSDLFNKNMRAHALEMGFTLNEYTIRPLGVTGVAGEPLPVDSEKDIF DYLQWQYREPKERSE |
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