Gene
| Gene Model ID | habu1_s2857_g10179 |
|---|---|
| Locus | habu1_scaffold2857 : 161053 ... 164795 : - |
| To GenomeBrowser | habu1_scaffold2857:161053..164795 |
| Genes list of scaffold | habu1_scaffold2857 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| interleukin-1 beta-like | GO:0005149 GO:0005615 GO:0006954 GO:0006955 GO:0007165 GO:0008283 GO:0040007 GO:0045323 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2857_g10179.t2 | 1 | 1 | IL1_propep | 4 | 69 | 1.7e-07 | 31.6 | 9.9e-11 | 4.9e-07 | 30.1 |
| habu1_s2857_g10179.t2 | 1 | 1 | IL1 | 118 | 236 | 1.5e-26 | 92.2 | 7.4e-30 | 3.7e-26 | 90.9 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.3 |
| Venom grand-1 | 0.5 |
| Pit, infrared sensing | 2.6 |
| Nose | 2.0 |
| Brain-1 | 0.1 |
| Eye | 0.5 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.2 |
| Lung | 0.1 |
| Liver | 0.2 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.6 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.1 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s2857_g10179.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10179.t1 tgcagcggagaggaggatcaggaacgaggagtctgcccgtctttttgtgcagtttgagcaggatgcagttctgtgcagcg aaccagccctaccggacaaagaatgccttccaagccagtgagatcgatgtgcaggtagcagtgaccaagaaagagccctt gaagagcttcaggaaggctgtgctgattgtcattgcgaccgagagcatgaggaattctcccaggctcttctccgatgagg acctaatggacattctaagcacagtcttagaaccggtcacatttgacatctatggatacacagaagcctctaattccatc tatcacttctggaggaatgttgtctgtaacatccaagatactgaccacaagtccctcgtcttccaggaacctgcacagtt ggtagccatgcatcttcagggtcccaaccttgagcaagcagtgaagttaaaaatgtctgtgtatcgtccaaaaatcgagg ctggaactcaaagggtccctgtggtattgagcatccagaacaggaagcactatctctcctgcgtggggaaggagggacag ccagtgctgcagctggaggaagccaacatccaagggaacctcgacaaacccgagctgggccgtttccttttctacaaaat tgacaatgaaaagcacacaaggttcgaatcagctaaattcccaggatggttcatctgcacgtccatccaacctgaggagg ccgttgcctttaccaaccaacccgaaggccctagggtcattgtggattacagcctctccggccagtgaccagaggctgct ctgcttggcaggtggcaaagcagcagatgctgcatgccaggacggcccaaagggctgtccagcctccgcgttatcggcag ggattttttctttgactggaaagtctgagtacacaaatacaaactgaaggggggggggaatatttaaaatacctatttat taataatttaataaatatttgccagtttataccagacatatgatgataaattaagttttatattgatgcctttattaata atttaataaataatttatgccagatgctcttg |
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| Transcript ID | habu1_s2857_g10179.t2 |
| Definition | - |
>habu1_s2857_g10179.t2 tgcagcggagaggaggatcaggaacgaggagtctgcccgtctttttgtgcagtttgagcaggatgcagttctgtgcagcg aaccagccctaccggacaaagaatgccttccaagccagtgagatcgatgtgcaggtagcagtgaccaagaaagagccctt gaagagcttcaggaaggctgtgctgattgtcattgcgaccgagagcatgaggaattctcccaggctcttctccgatgagg acctaatggacattctaagcacagtcttagaaccggtcacatttgacatctatggatacacagaagcctctaattccatc tatcacttctggaggaatgttgtctgtaacatccaagatactgaccacaagtccctcgtcttccaggaacctgcacagtt ggtagccatgcatcttcagggtcccaaccttgagcaagcagtgaagttaaaaatgtctgtgtatcgtccaaaaatcgagg ctggaactcaaagggtccctgtggtattgagcatccagaacaggaagcactatctctcctgcgtggggaaggagggacag ccagtgctgcagctggaggaagccaacatccaagggaacctcgacaaacccgagctgggccgtttccttttctacaaaat tgacaatgaaaagcacacaaggttcgaatcagctaaattcccaggatggttcatctgcacgtccatccaacctgaggagg ccgttgcctttaccaaccaacccgaaggccctagggtcattgtggattacagcctctccggccagtgaccagaggctgct ctgcttggcaggtggcaaagcagcagatgctgcatgccaggacggcccaaagggctgtccagcctccgcgttatcggcag ggattttttctttgactggaaagtctgagtacacaaatacaaactgaaggggggggggaatatttaaaatacctatttat taataatttaataaatatttgccagtttataccagac |
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Protein
| Protein ID | habu1_s2857_g10179.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10179.t1 MQFCAANQPYRTKNAFQASEIDVQVAVTKKEPLKSFRKAVLIVIATESMRNSPRLFSDEDLMDILSTVLEPVTFDIYGYT EASNSIYHFWRNVVCNIQDTDHKSLVFQEPAQLVAMHLQGPNLEQAVKLKMSVYRPKIEAGTQRVPVVLSIQNRKHYLSC VGKEGQPVLQLEEANIQGNLDKPELGRFLFYKIDNEKHTRFESAKFPGWFICTSIQPEEAVAFTNQPEGPRVIVDYSLSG Q |
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| Protein ID | habu1_s2857_g10179.t2 |
| Definition | - |
>habu1_s2857_g10179.t2 MQFCAANQPYRTKNAFQASEIDVQVAVTKKEPLKSFRKAVLIVIATESMRNSPRLFSDEDLMDILSTVLEPVTFDIYGYT EASNSIYHFWRNVVCNIQDTDHKSLVFQEPAQLVAMHLQGPNLEQAVKLKMSVYRPKIEAGTQRVPVVLSIQNRKHYLSC VGKEGQPVLQLEEANIQGNLDKPELGRFLFYKIDNEKHTRFESAKFPGWFICTSIQPEEAVAFTNQPEGPRVIVDYSLSG Q |
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