Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s2857_g10182
Locus habu1_scaffold2857 : 227335 ... 236945 : -
To GenomeBrowser habu1_scaffold2857:227335..236945
Genes list of scaffold habu1_scaffold2857

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s2857_g10182.t1 gi|602639166|ref|XP_007426403.1| PREDICTED: tigger transposable element-derived protein 1-like, partial [Python bivittatus] 2.0e-09
habu1_s2857_g10182.t1 gi|602656968|ref|XP_007434210.1| PREDICTED: histone-lysine N-methyltransferase SETD2 isoform X2 [Python bivittatus] 3.0e-08
habu1_s2857_g10182.t1 gi|602671275|ref|XP_007441153.1| PREDICTED: tigger transposable element-derived protein 1-like [Python bivittatus] 4.0e-06

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 1.0
Venom grand-1 2.0
Pit, infrared sensing 0.8
Nose 0.3
Brain-1 1.0
Eye 0.7
fetal fibroblast 1.0
venom gland-2 0.1
Brain-2 1.1
Spleen 0.7
Lung 0.9
Liver 1.4
Kidney 1.1
Pancreas 1.6
Small intestine 0.5
Large intestine 1.1
Stomach 0.8
heart 1.0
ovary 0.3
cheek muscle 2.1

Transcript
Transcript IDhabu1_s2857_g10182.t1
Definition-
>habu1_s2857_g10182.t1
gtccccgaaattacggccggttgaatgacctagatcggccccccggaggcttggcgctcctcgctttcctgtcgcccgga
agcaggcggcgtcctggggcgtttcggccggtgcctgttttcgcttttgtgcggcaccagcagaacgaagcgcctgggcg
cgcgtgtgtgtttgtgtgcacgttgctgtaagtacttattttcagaggggatgtcctcaagggaaaagcaaaagctccaa
cttcagctaaggaagcaagcaagcaagaatcaaaggaaaaccatacatcttgatttgaagaagatcatcaaaatgcacga
ggaatggaagaaggagaacattatagcacaagaagaagggctggcccattccaccatctccaccatcccgaaggatcaga
gagaattcctattaaaagcaatctccacccagatgtaaagtttcacccgtcctgttcttttaatcaagcatccagatcta
cacacacggtctgttttattggaggataggtgcatgtcaaagctgcacacagagtaacatgtagtgaggacagaacagtc
tttattcagaaatcttctcctctgcctcagaaagatcaaaactaaagaagtagaagaattgaaacaaagaattacagagc
atctagaatagcacaaaactaacagaagaaggtggcattgaagtttgttccaaagaaacagcaactattaaaagatgtca
atattgtaatatta

Protein
Protein IDhabu1_s2857_g10182.t1
Definition-
>habu1_s2857_g10182.t1
MSSREKQKLQLQLRKQASKNQRKTIHLDLKKIIKMHEEWKKENIIAQEEGLAHSTISTIPKDQREFLLKAISTQM

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