Gene
| Gene Model ID | habu1_s2857_g10186 |
|---|---|
| Locus | habu1_scaffold2857 : 304969 ... 317405 : - |
| To GenomeBrowser | habu1_scaffold2857:304969..317405 |
| Genes list of scaffold | habu1_scaffold2857 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nadh dehydrogenase | GO:0005524 GO:0005747 GO:0009165 GO:0019206 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2857_g10186.t1 | 1 | 1 | dNK | 2 | 135 | 8.9e-21 | 74.3 | 1.6e-24 | 1.2e-20 | 73.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2857_g10186.t1 | gi|602657768|ref|XP_007434598.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial-like [Python bivittatus] | 0.0 |
| habu1_s2857_g10186.t1 | gi|697472206|ref|XP_009669339.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial [Struthio camelus australis] | 0.0 |
| habu1_s2857_g10186.t1 | gi|543736687|ref|XP_005509288.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial [Columba livia] | 0.0 |
| habu1_s2857_g10186.t1 | gi|327289187|ref|XP_003229306.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial [Anolis carolinensis] | 0.0 |
| habu1_s2857_g10186.t1 | gi|663265619|ref|XP_008493244.1| | PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial, partial [Calypte anna] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 30.3 |
| Venom grand-1 | 47.5 |
| Pit, infrared sensing | 39.1 |
| Nose | 30.3 |
| Brain-1 | 31.2 |
| Eye | 32.0 |
| fetal fibroblast | 74.1 |
| venom gland-2 | 44.9 |
| Brain-2 | 37.5 |
| Spleen | 23.5 |
| Lung | 20.7 |
| Liver | 68.7 |
| Kidney | 53.4 |
| Pancreas | 48.6 |
| Small intestine | 37.4 |
| Large intestine | 36.0 |
| Stomach | 44.6 |
| heart | 140.3 |
| ovary | 51.3 |
| cheek muscle | 92.8 |
Transcript
| Transcript ID | habu1_s2857_g10186.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10186.t1 gggggctgctgggaaagcttcatgtcagttcccacaggaaccttcagtatggctggacagcgtatatattgggagataaa gctagtgcaaagttcactgaatacagcaaagtcttcacagtggatggtaatctgcatgctggcacagcaaaacttgccca acaagtggcagaaatattgggtttgcgatatttcccagaagccaatattcatttattagacagtctcacgggagatggaa aaaaactggatttaaaatataacggcagttgctgtctggagacattttacaatgagcctaagcatccaaatggaaactct taccggcttcaagcttggatgtactgttcccgctttctacagtatgcagatgctctcagccatctcttgagtacaggaca aggagtcgtgctggaacgctctccctacagtgactttgttttcctggaggccatgtcaaaacaaaactacattcacccaa ggtgtgtgaaacactactataggatgaagcatcttagtatttgtgagattttgcctcctcacctggtcctttatattgat gttcctgtctcagaagttaagaaaaggattgacaagataggcgagccccatgaaaaaaacgtatcaacagcatatcttca aagcattgaagatgcctataagaaatctttcctgccacagatgagtgagacctcggagatcttgcaatatacagccagtg aacttgacagcatggagagaattattgaagacattgaaatgctgaaatttgataaaggaccttggcttgtacaagatgat cttaccttgcattacttgaggtgttgtgttaatgacaaatccaaaatactgagtcctctggcggttcccgactacattcc tgaagtcacagtaggaggcctcgatgctgatgcaatctaccacagctacagggagcttcctggacgcatgtttgcaccgg gttacaatgctgatgtgggagacaagtggatctggctaaaatagcccatttccttggaagaatgaagttggccacagaag gacgatgaagcgcctgttaagccgccagctgtaaataggtgacatctttagcgaaggtggcaggtcttcagctggaagaa ccagccaacaaaaaggaagttgtcttcacgtttaatcaatgttcttctgagcagaatcccacgaaggcaaagaagggact ctgtggcaagcttggtgaataaaatggcatctagtccaacctgga |
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Protein
| Protein ID | habu1_s2857_g10186.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10186.t1 MYCSRFLQYADALSHLLSTGQGVVLERSPYSDFVFLEAMSKQNYIHPRCVKHYYRMKHLSICEILPPHLVLYIDVPVSEV KKRIDKIGEPHEKNVSTAYLQSIEDAYKKSFLPQMSETSEILQYTASELDSMERIIEDIEMLKFDKGPWLVQDDLTLHYL RCCVNDKSKILSPLAVPDYIPEVTVGGLDADAIYHSYRELPGRMFAPGYNADVGDKWIWLK |
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