Gene
| Gene Model ID | habu1_s2857_g10187 |
|---|---|
| Locus | habu1_scaffold2857 : 317516 ... 331082 : + |
| To GenomeBrowser | habu1_scaffold2857:317516..331082 |
| Genes list of scaffold | habu1_scaffold2857 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2857_g10187.t1 | 1 | 1 | RAI16-like | 80 | 460 | 0.0 | 265.9 | 0.0 | 0.0 | 265.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2857_g10187.t1 | gi|602657772|ref|XP_007434600.1| | PREDICTED: protein FAM160B2 [Python bivittatus] | 0.0 |
| habu1_s2857_g10187.t1 | gi|530582634|ref|XP_005285160.1| | PREDICTED: protein FAM160B2 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s2857_g10187.t1 | gi|530582636|ref|XP_005285161.1| | PREDICTED: protein FAM160B2 isoform X2 [Chrysemys picta bellii] | 0.0 |
| habu1_s2857_g10187.t1 | gi|637367797|ref|XP_008121461.1| | PREDICTED: protein FAM160B2 [Anolis carolinensis] | 0.0 |
| habu1_s2857_g10187.t1 | gi|591383855|ref|XP_007066386.1| | PREDICTED: protein FAM160B2-like, partial [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.4 |
| Venom grand-1 | 9.5 |
| Pit, infrared sensing | 6.9 |
| Nose | 5.3 |
| Brain-1 | 4.6 |
| Eye | 5.2 |
| fetal fibroblast | 5.3 |
| venom gland-2 | 8.6 |
| Brain-2 | 4.2 |
| Spleen | 4.9 |
| Lung | 6.6 |
| Liver | 9.1 |
| Kidney | 5.9 |
| Pancreas | 7.6 |
| Small intestine | 8.4 |
| Large intestine | 7.0 |
| Stomach | 6.1 |
| heart | 3.8 |
| ovary | 13.0 |
| cheek muscle | 6.2 |
Transcript
| Transcript ID | habu1_s2857_g10187.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10187.t1 acgtagcgggcgcgggcggagggcgtcgccgccatggcgctgctgggccggctgggcgatctgctgcggcgggccgtgga ggcggaggagccgcgcctcgatctcccggccgccttcacggagcactggaagggcgtcacccaccattacctggaggccc cagatgaaaacaagtcggcgaagcagacggacattccctggcgcttaaaacagatgctggacatcctggtctacgaggag aagcaacagcaggaaggggagacgggaccctgcctggaatacttgctgcagcacaaaatcctggagacactcagcactct ggggaaagcagagtatcctccaggaatgaggtcacaggtgcttctctttttcagtcgcctgctggggcagatgcagagcc ctctcttgcattacttcaatgtttaccggcctgttcagaaacttcttcagcttcagggggatgcattaggccctgagctc gagaaggaagcgctgcagtttgttgctgttctatgtaccaaaatcaggcaggaacctgctctgctaccacacgtcctaga gggccagaatgttggttccctgggattggcagccaagccaagcacgacctctggccagaccctgccctcctctgaagaac ggggtggagggctgtgtccagagaaaccactcggggaccctgctgcctccatgctgaatttggtgactgctctaattggc ttatgtaagagcaagaacaagaaggttgtgctaaaagcccaagagaacctactgcttcttaccagggtggaccatccaac cgctgcccaggccttggcccaagacagcatgctgtgccttctgctacccgactatctctgctccctgtacaaggccatcc ctgttaccatcaagcctgccgatgttaccaggcttccacccgtcccgtgcaggctccagagtgacgcctcagtggaggga agctccttcccaggagagcacagcctggaggctttctttgattggctggatttttgtgactgtctcgtgaagcaggctca tcccgttgtcggagatgccctgagcacgactgtggggcggaggctcttcctggaaaccttgcggcctcaactcttgcaga tgtcagactctgggattctcttttcagtggccatcctgacgggcctggtgagacggattcacgctcctgccctcctccag cagctggctgggtttctgctgggagcagaaatggatcccgtcaggcccagcgattcagcctggcggccacagagccccag cctctgctcacggctgattgagaactgcagccatccgtctgatgagatcagcatggccaccctacggttgtttgaggagc tgctttggcttcctgaccagcgcatcttgcagagcctggtgctgtgccatctggaggagcgcagctacatcttgagaagt ccacctggtcaggaagatcttgccgtccctgaacaagagttttgtgaagaggggctagacctagaagaagatccttactt tgcagatgggctcccagcagccgagccccagaggccaagcaagccagccaccttggctccaaaggaagggcctggccagc cagcggggcctgtggatgtgaaggaggcagtcagcagcttcctttgcctagtaccaagtgaggtgaagacctcagcttgt ctggaggaggcgggatatgacacttacgtccatgatgctaaagtactgtttcaagaatgctgtgcgaatgttgcgtgctg gacgtggcccgaggctcagctgccccagaagagcagccctgcgggaccccggttttatgagggtcctttcctgcaggtgc tctttgatcggctggcccagatcttacaccagccctatgcaatgaatctgcaggtgacgtcggtgctgtctcgcttggcc ctcttccctcaccctcacctccacgagtaccttctggacccctacctcccattggcccctggctgcaggaccctcttctc ggtgctaattagggtgatcagcagcctgatgcacagagcccatcggatcacagacctctccaccaacttgctgctggtcc ggaaaaagctaatggggctggtgccagatgaccccccgattggccaccagatgctcttggagggggtgatcgtgctggag gaattctgcaaagaactggctgccatcgtctttgtcaagtctgccctcaagggccctcctgggcagagtcagcagtgcgc tccttcccccagctgaaaggtctgggtctctggcacattggctcccctgcctctttgaggccttcaggagttgagagcaa caccctggctgacttcctgtgtgtagagaaaagcagcagcagcaccttgttcttggcataaaagtggcttcaaataagga gggacgttgggatgagaagcagttggttgcttcgtcagcagccgcgacacaggcctcccgaggaatgcatgcgtctccct tgattatgctggggccttgttgagccagcggccggctgcctgccttctggcgcctgacccagcttgccatccagagcctt gtcctttttcttggcctactgcctaatgccaagaacaaaaagatccagataaagcatctggattttatcttctaaaaaat actagcaagatagggctgttttcagcttattttagccattgggattaaatcatggaggtccttgtaaaagaggagttttc tgtggtgaatggatttgggaatctgttgctataactttgcctccttttatgtttgctactcttatttcagtcatgatcat ctctaaatgcagcccaggccaaaagaggaaggctcctgtccagagcctgtactgtagttctctccgtggggctgtctagc taagtgaccctcttctcgcccacttttcttggcgtatgtactcagctgaaggttctgtgccaggacttattttttacaat atcttccatcagtctaaagattaatcctgccatgctactggatccctggtttccttttgtacccagagcttgctgtggtg agctaatggaagcctctcctaccatctcattcctaggactgttgcaaagttctcctagtctataaatatgctgaagtagg tctggaagtgctgttctgtcttggcatattgcctaggtctctgcagcgagctgatctttggcccaaaatgaagatggaac agagaaacctgcctttgccagacttgctgagcagagcctgtggcaacatcggtttgagcccctggaggaaagacagcttg tgctctaataaatgaatgtctgggaactttttcc |
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Protein
| Protein ID | habu1_s2857_g10187.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10187.t1 MALLGRLGDLLRRAVEAEEPRLDLPAAFTEHWKGVTHHYLEAPDENKSAKQTDIPWRLKQMLDILVYEEKQQQEGETGPC LEYLLQHKILETLSTLGKAEYPPGMRSQVLLFFSRLLGQMQSPLLHYFNVYRPVQKLLQLQGDALGPELEKEALQFVAVL CTKIRQEPALLPHVLEGQNVGSLGLAAKPSTTSGQTLPSSEERGGGLCPEKPLGDPAASMLNLVTALIGLCKSKNKKVVL KAQENLLLLTRVDHPTAAQALAQDSMLCLLLPDYLCSLYKAIPVTIKPADVTRLPPVPCRLQSDASVEGSSFPGEHSLEA FFDWLDFCDCLVKQAHPVVGDALSTTVGRRLFLETLRPQLLQMSDSGILFSVAILTGLVRRIHAPALLQQLAGFLLGAEM DPVRPSDSAWRPQSPSLCSRLIENCSHPSDEISMATLRLFEELLWLPDQRILQSLVLCHLEERSYILRSPPGQEDLAVPE QEFCEEGLDLEEDPYFADGLPAAEPQRPSKPATLAPKEGPGQPAGPVDVKEAVSSFLCLVPSEVKTSACLEEAGYDTYVH DAKVLFQECCANVACWTWPEAQLPQKSSPAGPRFYEGPFLQVLFDRLAQILHQPYAMNLQVTSVLSRLALFPHPHLHEYL LDPYLPLAPGCRTLFSVLIRVISSLMHRAHRITDLSTNLLLVRKKLMGLVPDDPPIGHQMLLEGVIVLEEFCKELAAIVF VKSALKGPPGQSQQCAPSPS |
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