Gene
| Gene Model ID | habu1_s2857_g10189 |
|---|---|
| Locus | habu1_scaffold2857 : 341786 ... 351505 : + |
| To GenomeBrowser | habu1_scaffold2857:341786..351505 |
| Genes list of scaffold | habu1_scaffold2857 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2857_g10189.t1 | 2 | 1 | SapA | 28 | 60 | 1.2e-23 | 82.5 | 1.8e-15 | 8.9e-12 | 44.5 |
| habu1_s2857_g10189.t1 | 3 | 1 | SapB_1 | 75 | 112 | 2.9e-18 | 65.2 | 3.0e-09 | 1.5e-05 | 24.7 |
| habu1_s2857_g10189.t1 | 3 | 1 | SapB_2 | 118 | 151 | 2.0e-19 | 69.2 | 3.6e-11 | 1.8e-07 | 31.0 |
| habu1_s2857_g10189.t1 | 3 | 2 | SapB_1 | 201 | 234 | 2.9e-18 | 65.2 | 1.8e-06 | 0.009 | 15.8 |
| habu1_s2857_g10189.t1 | 3 | 2 | SapB_2 | 239 | 272 | 2.0e-19 | 69.2 | 1.5e-07 | 0.00074 | 19.4 |
| habu1_s2857_g10189.t1 | 3 | 3 | SapB_1 | 290 | 324 | 2.9e-18 | 65.2 | 4.6e-08 | 0.00023 | 20.8 |
| habu1_s2857_g10189.t1 | 3 | 3 | SapB_2 | 330 | 363 | 2.0e-19 | 69.2 | 4.8e-09 | 2.4e-05 | 24.2 |
| habu1_s2857_g10189.t1 | 2 | 2 | SapA | 373 | 403 | 1.2e-23 | 82.5 | 1.0e-16 | 5.2e-13 | 48.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2857_g10189.t1 | gi|602657774|ref|XP_007434601.1| | PREDICTED: pulmonary surfactant-associated protein B isoform X1 [Python bivittatus] | 0.0 |
| habu1_s2857_g10189.t1 | gi|637376994|ref|XP_008123097.1| | PREDICTED: pulmonary surfactant-associated protein B [Anolis carolinensis] | 0.0 |
| habu1_s2857_g10189.t1 | gi|591350960|ref|XP_007069932.1| | PREDICTED: pulmonary surfactant-associated protein B [Chelonia mydas] | 0.0 |
| habu1_s2857_g10189.t1 | gi|530565563|ref|XP_005279335.1| | PREDICTED: pulmonary surfactant-associated protein B [Chrysemys picta bellii] | 0.0 |
| habu1_s2857_g10189.t1 | gi|147899565|ref|NP_001090534.1| | pulmonary surfactant-associated protein B precursor [Xenopus laevis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.8 |
| Venom grand-1 | 0.3 |
| Pit, infrared sensing | 0.6 |
| Nose | 1.3 |
| Brain-1 | 0.5 |
| Eye | 0.4 |
| fetal fibroblast | 1.1 |
| venom gland-2 | 0.5 |
| Brain-2 | 0.6 |
| Spleen | 1.6 |
| Lung | 695.7 |
| Liver | 1.0 |
| Kidney | 1.5 |
| Pancreas | 0.1 |
| Small intestine | 1.9 |
| Large intestine | 2.5 |
| Stomach | 1.2 |
| heart | 0.7 |
| ovary | 7.2 |
| cheek muscle | 0.5 |
Transcript
| Transcript ID | habu1_s2857_g10189.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10189.t1 ctcgtcctctgaagacgcctaatcttgagggcctggcagccgccctcttgggggagtcatgcagggctgggaatgaattg ggaagtgccaagcaggcgatgcttctccatcagcctctccattggctgcctttgcccactcagtgaagaataaaaagggc cctgtccgagccctggcatgcatgccggacagctcgccatgtggcccctgctcctgctcagcctgctctctggaggcctg gtcctaaccagcaaggtccagaatgaatgtgccaagggggcagcgtactggtgcagcaacttaatggcagctatcaagtg tggtgctttggatcactgtgtccagactgggtggaatcaagccagcaatgagagtgtctggaacagaatcagcaatgagg acacgtgtgcagactgcaaacagcttatctccatccttgtgcgcatggccaaggaatcagcctttaaggaaactctccag aagtatttagagcatgaatgtaccaatttgccacttcaaacacttatcccacagtgccaagccttggtaaaggactacta tgcccgtttaattgccagcctggaagaacagtttgaccccagcatcatttgtgcccagttgggagcctgtccagctgacc ttctgggaagcaaggatggcttgatgcagctgttcacagggctagagcagctccttccaccgctgcaaggccagacgccc atcctgcccagtggccacacgcaggagtccccccaggaactgctgcccatccccctgcctctctgctggttgtgcaggac gtttattggcaaggctgagtctgtcatccccaaggccgctataggcaaagccatgtccaaactctgctacattctgccag gggctgtggctggcatgtgccagtgcctgatggagaaatatacggtgatcattgtggacacaattgtgagcaagctgggc ccacgcctgatctgtggaatgatgttcatgtgtgcctcagaggaaaactgtggtccagagagcctgttgccggctacagc cgagggatgtcagatgtgtctcatgatcagtgaccaagtgaaggcatctctaagagaaaatcgcaccaggagagcagtgg aggcagccttgtccacagcctgcagccgttccttttcctcctggcctcagtgcaaccacttcatccatcagcaccagcca aagctgtctgcactgttaatgaagccctgggactcccaagctacctgccaggaactgggtgcctgcggagcggagcagct tttgccgagtgccactccctgtgcccagggacccacttactggtgctccagcctgagtgcagccaagcaatgcaaggcta tacagcattgccaggatcacgcatggttgtaaacgagcaaggagggtcctgctcaacgcaggacagctctgcttctctca ccttgactgctgatgaagaaaatattctcaactattaaaattaacctccagagcacactgacaaaagtgttttccttgta caagctaagtttgcatttatagatagatgtgatacagtacaagacaaatcctgggattgaagaccgtccatgccttactt ttatcacacgagaattcttgaggctttttttaccctaaggaccaagctattagaaatatttggggagggaagcaaatggt atggccatgcagtggcttggaatcaatttggaacatgcagcaatatgagccaagcaccctctggctcattaaaggagctg tgtcattttctaggattgcacagctactgcaagacaagtactgccttcgtgcttcagtactgtcaagccctgaacatcca agcacacagccaaggaacggtctcattgatcagattgtcaagaaaaagggattactgaaccttggaaactaatcaagaga catttattagtaataaaaatatgaatttctctctaaggt |
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Protein
| Protein ID | habu1_s2857_g10189.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10189.t1 MHAGQLAMWPLLLLSLLSGGLVLTSKVQNECAKGAAYWCSNLMAAIKCGALDHCVQTGWNQASNESVWNRISNEDTCADC KQLISILVRMAKESAFKETLQKYLEHECTNLPLQTLIPQCQALVKDYYARLIASLEEQFDPSIICAQLGACPADLLGSKD GLMQLFTGLEQLLPPLQGQTPILPSGHTQESPQELLPIPLPLCWLCRTFIGKAESVIPKAAIGKAMSKLCYILPGAVAGM CQCLMEKYTVIIVDTIVSKLGPRLICGMMFMCASEENCGPESLLPATAEGCQMCLMISDQVKASLRENRTRRAVEAALST ACSRSFSSWPQCNHFIHQHQPKLSALLMKPWDSQATCQELGACGAEQLLPSATPCAQGPTYWCSSLSAAKQCKAIQHCQD HAWL |
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