Gene
| Gene Model ID | habu1_s2857_g10191 |
|---|---|
| Locus | habu1_scaffold2857 : 361436 ... 365142 : + |
| To GenomeBrowser | habu1_scaffold2857:361436..365142 |
| Genes list of scaffold | habu1_scaffold2857 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2857_g10191.t1 | 1 | 1 | UPF0561 | 8 | 29 | 2.2e-10 | 40.4 | 2.1e-14 | 3.1e-10 | 39.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2857_g10191.t1 | gi|291415892|ref|XP_002724183.1| | PREDICTED: UPF0561 protein C2orf68 homolog [Oryctolagus cuniculus] | 6.0e-07 |
| habu1_s2857_g10191.t1 | gi|504158796|ref|XP_004590782.1| | PREDICTED: UPF0561 protein C2orf68 homolog [Ochotona princeps] | 6.0e-07 |
| habu1_s2857_g10191.t1 | gi|395853517|ref|XP_003799253.1| | PREDICTED: UPF0561 protein C2orf68 homolog [Otolemur garnettii] | 2.0e-06 |
| habu1_s2857_g10191.t1 | gi|348566307|ref|XP_003468943.1| | PREDICTED: UPF0561 protein C2orf68 homolog [Cavia porcellus] | 2.0e-06 |
| habu1_s2857_g10191.t1 | gi|512904287|ref|XP_004900239.1| | 3.0e-06 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 18.8 |
| Venom grand-1 | 51.4 |
| Pit, infrared sensing | 28.8 |
| Nose | 19.8 |
| Brain-1 | 18.2 |
| Eye | 25.3 |
| fetal fibroblast | 21.6 |
| venom gland-2 | 53.9 |
| Brain-2 | 22.2 |
| Spleen | 35.6 |
| Lung | 33.2 |
| Liver | 57.9 |
| Kidney | 46.5 |
| Pancreas | 71.0 |
| Small intestine | 49.5 |
| Large intestine | 27.0 |
| Stomach | 47.7 |
| heart | 22.6 |
| ovary | 79.9 |
| cheek muscle | 75.5 |
Transcript
| Transcript ID | habu1_s2857_g10191.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10191.t1 aggcgcgggggggaggggcggtcgggagcggcgccgatggacgcggggcgcggccccccgggcggccgcctggacctgag ccacggcttcgtgcggcacatccggcgcaaccagatcgccaggataatgaccccgaagaagtggtggagaaggtcagtgc ccagaatgagctggagccagctttgcacgaagcccttcggcaacgagtgcgagaggaattggagaagcggcgagcgaaac gctgagagccattgcaaggattgagaaatactgtaggggaaacagtgctggacccatgcttgggggactcccttacgctg ctcaagggcaccatcgggagtggtggcagaaggaagcaaatccctgcagtcgtcctttgacagctctgcccgaaaaaatt gtaagccacccacagtcacttagattgagttgggtggctatagaaattgattcaataaacttacgttttagcacattttg a |
|
Protein
| Protein ID | habu1_s2857_g10191.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10191.t1 MDAGRGPPGGRLDLSHGFVRHIRRNQIARIMTPKKWWRRSVPRMSWSQLCTKPFGNECERNWRSGERNAESHCKD |
|