Gene
| Gene Model ID | habu1_s2857_g10195 |
|---|---|
| Locus | habu1_scaffold2857 : 376969 ... 381845 : - |
| To GenomeBrowser | habu1_scaffold2857:376969..381845 |
| Genes list of scaffold | habu1_scaffold2857 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2857_g10195.t2 | 1 | 1 | Synaptobrevin | 4 | 89 | 1.4e-24 | 85.4 | 1.5e-27 | 1.6e-24 | 85.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2857_g10195.t2 | gi|671014957|ref|XP_008698293.1| | PREDICTED: vesicle-associated membrane protein 5 isoform X2 [Ursus maritimus] | 1.0e-29 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 17.9 |
| Venom grand-1 | 16.5 |
| Pit, infrared sensing | 16.3 |
| Nose | 10.6 |
| Brain-1 | 2.4 |
| Eye | 8.9 |
| fetal fibroblast | 32.9 |
| venom gland-2 | 3.9 |
| Brain-2 | 1.8 |
| Spleen | 38.7 |
| Lung | 25.9 |
| Liver | 7.3 |
| Kidney | 20.1 |
| Pancreas | 6.1 |
| Small intestine | 5.2 |
| Large intestine | 12.1 |
| Stomach | 4.0 |
| heart | 35.1 |
| ovary | 2.0 |
| cheek muscle | 73.8 |
Transcript
| Transcript ID | habu1_s2857_g10195.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10195.t1 cgcccactcttgccccgcgggcggccagaggacgcgccccggctgctcccggaggacccagtccgagtggaggcgccgcc gggtccgctcccgccgctgcagctcccggcgccggccatggaagcaccgcatttcagacgctgcttcctggcagaatctc cccggggctttccttgcctcctgttaaccaaatgccggaggagttggcacttgcttcagaaggaggaggctggttctccg tgggaatatttgaaaagtttccagcaaggattcttgcacacattttaaggcactttgaaaacacagtctctgctatgcag cagaagatgggataaaactgttaatttgaagcaaaggtacaaaaaagtactgtgactggtaacgaaggcaaaacctcttt tggagaggagagagagattaggaagcgagttcggtagcagggctggaccagcaaacatgccccaccctgatgcaaaagta caggtcccgacctgcttcacggtgcttctccggctgggcttcaggtttctgcagggaaacgcaaatcctgatacagcgat agaatgaccggctactgacctcaaatcaatttggggaaacagatgggagagccatgcacccatgcatgcaactctctctc tggctttctcggctacacctcttcccacaagctcatctccacttcagtcccacgaaagagtttgtgcccaggggcgagaa ccatctggggcgatgccagcaggaggctgaggaggtgacggaaatcatgctagacaactacaccaaggtgttggaccgcg agggcaagcttagcgacctggatgagcgggctgatgagctttgtaaacagagttctgccttcaccaagacaacaaaaacc ctggcccagaagaaacgctgggagaatatgagatgcaagatcatcctgttggccgtggttgtggtggctgttctgctcat cgtctcagccatcaccctctacttcactctctctggatccgggaaccaggtggctccagcaaagaccagcactggtggtg actgatcagctgatccagttctccccaggatcctcttcccaacaagctttcaggggtgcagggcatcggggccttgctag gacctggcagcagccttgaccacttcatttctcattgtggcaagcaaactgtggaaggacgcaaaggacgcagccctctt gatgtccacgacctcaacaccaaaaaagactct |
|
| Transcript ID | habu1_s2857_g10195.t2 |
| Definition | - |
>habu1_s2857_g10195.t2 cgcccactcttgccccgcgggcggccagaggacgcgccccggctgctcccggaggacccagtccgagtggaggcgccgcc gggtccgctcccgccgctgcagctcccggcgccggccatgggcgagaaccatctggggcgatgccagcaggaggctgagg aggtgacggaaatcatgctagacaactacaccaaggtgttggaccgcgagggcaagcttagcgacctggatgagcgggct gatgagctttgtaaacagagttctgccttcaccaagacaacaaaaaccctggcccagaagaaacgctgggagaatatgag atgcaagatcatcctgttggccgtggttgtggtggctgttctgctcatcgtctcagccatcaccctctacttcactctct ctggatccgggaaccaggtggctccagcaaagaccagcactggtggtgactgatcagctgatccagttctccccaggatc ctcttcccaacaagctttcaggggtgcagggcatcggggccttgctaggacctggcagcagccttgaccacttcatttct cattgtggcaagcaaactgtggaaggacgcaaaggacgcagccctcttgatgtccacgacctcaacaccaaaaaagactc t |
|
Protein
| Protein ID | habu1_s2857_g10195.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10195.t1 MHPCMQLSLWLSRLHLFPQAHLHFSPTKEFVPRGENHLGRCQQEAEEVTEIMLDNYTKVLDREGKLSDLDERADELCKQS SAFTKTTKTLAQKKRWENMRCKIILLAVVVVAVLLIVSAITLYFTLSGSGNQVAPAKTSTGGD |
|
| Protein ID | habu1_s2857_g10195.t2 |
| Definition | - |
>habu1_s2857_g10195.t2 MGENHLGRCQQEAEEVTEIMLDNYTKVLDREGKLSDLDERADELCKQSSAFTKTTKTLAQKKRWENMRCKIILLAVVVVA VLLIVSAITLYFTLSGSGNQVAPAKTSTGGD |
|