Gene
| Gene Model ID | habu1_s2857_g10198 |
|---|---|
| Locus | habu1_scaffold2857 : 447134 ... 449233 : + |
| To GenomeBrowser | habu1_scaffold2857:447134..449233 |
| Genes list of scaffold | habu1_scaffold2857 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| small nuclear ribonucleoprotein g | GO:0000245 GO:0000387 GO:0005515 GO:0005654 GO:0005683 GO:0005685 GO:0005687 GO:0005689 GO:0005829 GO:0006369 GO:0008334 GO:0019013 GO:0031124 GO:0034660 GO:0034709 GO:0034719 GO:0044822 GO:0071013 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2857_g10198.t1 | 1 | 1 | LSM | 8 | 70 | 7.5e-21 | 73.4 | 5.7e-25 | 8.4e-21 | 73.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2857_g10198.t1 | gi|692110337|ref|NP_001289021.1| | small nuclear ribonucleoprotein G [Gallus gallus] | 0.0 |
| habu1_s2857_g10198.t1 | gi|554530491|ref|XP_005860032.1| | PREDICTED: small nuclear ribonucleoprotein G-like [Myotis brandtii] | 0.0 |
| habu1_s2857_g10198.t1 | gi|683939343|ref|XP_009098202.1| | PREDICTED: small nuclear ribonucleoprotein G [Serinus canaria] | 0.0 |
| habu1_s2857_g10198.t1 | gi|557319597|ref|XP_006032961.1| | PREDICTED: small nuclear ribonucleoprotein G [Alligator sinensis] | 0.0 |
| habu1_s2857_g10198.t1 | gi|4507133|ref|NP_003087.1| | small nuclear ribonucleoprotein G [Homo sapiens] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 60.2 |
| Venom grand-1 | 79.9 |
| Pit, infrared sensing | 79.9 |
| Nose | 64.3 |
| Brain-1 | 21.4 |
| Eye | 26.5 |
| fetal fibroblast | 290.7 |
| venom gland-2 | 80.3 |
| Brain-2 | 28.1 |
| Spleen | 46.2 |
| Lung | 37.7 |
| Liver | 51.4 |
| Kidney | 23.8 |
| Pancreas | 63.6 |
| Small intestine | 37.5 |
| Large intestine | 41.9 |
| Stomach | 44.0 |
| heart | 73.1 |
| ovary | 253.1 |
| cheek muscle | 61.6 |
Transcript
| Transcript ID | habu1_s2857_g10198.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10198.t1 gaggcggtcggcttggaaaaggaaggatgagcaaagcgcacccgccggagctgaagaagtttatggacaagaagctatca ttaaaactaaatggaggtcggcatgttcaagggatattaagaggttttgatccattcatgaatttggtgatagatgagtg tgtggaaatggcacctggtggacaacagaacaacatagggatggtggtaatacgaggaaacagcatcatcatgctagaag ccctggaacgagtataaaaaatgaagtactggctcttgctacagtgtgggcaatttttattattgttggttctacaggat cattccatgtttacattttttaaaaaataaattcttaaaagtatgaatttttt |
|
Protein
| Protein ID | habu1_s2857_g10198.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10198.t1 MSKAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMAPGGQQNNIGMVVIRGNSIIMLEALERV |
|