Gene
| Gene Model ID | habu1_s2857_g10201 |
|---|---|
| Locus | habu1_scaffold2857 : 478074 ... 489380 : + |
| To GenomeBrowser | habu1_scaffold2857:478074..489380 |
| Genes list of scaffold | habu1_scaffold2857 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uncharacterized protein c2orf42 homolog isoform x1 | GO:0000166 GO:0003676 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2857_g10201.t1 | 1 | 1 | zf-tcix | 15 | 54 | 5.4e-20 | 70.4 | 1.5e-23 | 1.1e-19 | 69.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2857_g10201.t1 | gi|602651547|ref|XP_007432155.1| | PREDICTED: uncharacterized protein C2orf42 homolog [Python bivittatus] | 0.0 |
| habu1_s2857_g10201.t1 | gi|564266490|ref|XP_006272066.1| | PREDICTED: uncharacterized protein C2orf42 homolog isoform X1 [Alligator mississippiensis] | 0.0 |
| habu1_s2857_g10201.t1 | gi|557319568|ref|XP_006032947.1| | PREDICTED: uncharacterized protein C2orf42 homolog isoform X1 [Alligator sinensis] | 0.0 |
| habu1_s2857_g10201.t1 | gi|591381994|ref|XP_007065528.1| | PREDICTED: uncharacterized protein C2orf42 homolog isoform X1 [Chelonia mydas] | 0.0 |
| habu1_s2857_g10201.t1 | gi|530582864|ref|XP_005285273.1| | PREDICTED: uncharacterized protein C2orf42 homolog isoform X2 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.6 |
| Venom grand-1 | 6.4 |
| Pit, infrared sensing | 3.0 |
| Nose | 3.1 |
| Brain-1 | 2.6 |
| Eye | 4.0 |
| fetal fibroblast | 2.5 |
| venom gland-2 | 8.2 |
| Brain-2 | 3.6 |
| Spleen | 6.6 |
| Lung | 8.0 |
| Liver | 7.7 |
| Kidney | 6.3 |
| Pancreas | 13.0 |
| Small intestine | 9.3 |
| Large intestine | 6.5 |
| Stomach | 5.1 |
| heart | 4.9 |
| ovary | 2.7 |
| cheek muscle | 6.2 |
Transcript
| Transcript ID | habu1_s2857_g10201.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10201.t1 ctgggacgctggggagggagccgccaggttctctgaaggatggactccgtctccctgaggagtaaagtcccggctttctt atcagacctggggaaagcaaccttgagaggcatcaggaaatgcccccgatgcggcacctacaacggcactcgtgggctga gctgcaaaaacaagacctgtggcaccgtcttccgctacggctcacggaagccggctggcattgatgccgtcaagatcatt accggctcagacctccagatctactcggtgcggcagagggacaggggccccgaatatcggtgctttgtggagctgggcgt ctcggagaccaccatccagactgtggacgggaccatcctcacccagctcagctctgggcgctgctacctcccagcatgtc tgaaggcagcaacccaaggggtggtggaaaaccagtgccagcacctgaagcttgctatgagttgccaggcagaggccacc cccttgacgctgaaaagctccgtcttgaactcaatgcaggcctcgccccagaccaagcagaccctctgggagctggccac ccagccctcggggcccctggtgcaaagaatcactaagaacgtgctggtggtcaagtgcaaggccggcccgaagcacagct tgggctacctccacatcacttttgctcccaggtctggccacaagcacctagcgggcccccgctttttctgcccctgccag tccttgagggccagcaaggctggctctgccacggaggagggcagccagagatgcatccatttctttgcctgcatctgtgc cttcgccagcgatgaggctttagcccaggagtttgtggatttcctcagcgatgagcctggcggtttgcaatccccggcaa gagctccgcttgcttgccagccagaatcccctctgccctcgggagactctgcggcctccaaagcgaagcgcaagaagaag gacgaagggctgggcatgcaggccagcagccccctcttgtctcaagatctggcaaacaactccttgcagaaaaatggact gaagaaggcatccgttgcatcgctgaaaaggcaaactggcggtcaggtgctggaggagtcgcaggtggccttgtccttcc tggagtggctggccagcgccacggagcggatccaccaagccatgcactaccagtttgacggcaagccggagcccctcgtc ttccacgtcccgcaggccttcttcgaggctctccagcagcgaatctgccttgggagcgtcaagatgcggcttcccaactc cacgacagcttttgtccgcaaagatgccttaccgctgggtaccttttctaaatacacgtggcacatcaccaacatcttgc aggtgaagcagatctttgacactgtggagatgcctctggaaataacccgcagcttcatccagaaccgggatgggacctac gagcccttcaggtgccccaaagtggaggtggagagcatcgctgagacctatggacgcctggagaagcagcctgttcttcg ccccctggaactgaaaactttcttgaaagttggtaacacatccccggatcaaaaggaaccgacgcctttcatcattgagt ggatcccggacatcctgccccagtccaaaattggcgaactgaggatcaaatttgagtacggccactacaggaacggccac cctgccgactaccaggagcagcgtccttccctggatcaggccctggagatcatgccgctcaccaccctcaccttcccctg agcacccctcacctctgtctttgtgtgcacaactgcacaggcccgtttcgtagccggccactctctcctgctccctgcca gcaaccggccagaagagccgcagtttcacgtgacttcgctgcccaccctctgctctccaggagcttctcacttgggcctc tcttgcaaacagctgccccccccagccaagtcagatggtggaattagttctccctgaatccccaggccggctggcggctc cagcacacccagagtgccccagccaactcctgtccctcctttctccctgagacggccgtcgtcccagcagttccaagggc tggctggctggctgctacgatctctttactggcctattttacagtatatatttaaaataaattaatttaaggccatggca atg |
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Protein
| Protein ID | habu1_s2857_g10201.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10201.t1 MDSVSLRSKVPAFLSDLGKATLRGIRKCPRCGTYNGTRGLSCKNKTCGTVFRYGSRKPAGIDAVKIITGSDLQIYSVRQR DRGPEYRCFVELGVSETTIQTVDGTILTQLSSGRCYLPACLKAATQGVVENQCQHLKLAMSCQAEATPLTLKSSVLNSMQ ASPQTKQTLWELATQPSGPLVQRITKNVLVVKCKAGPKHSLGYLHITFAPRSGHKHLAGPRFFCPCQSLRASKAGSATEE GSQRCIHFFACICAFASDEALAQEFVDFLSDEPGGLQSPARAPLACQPESPLPSGDSAASKAKRKKKDEGLGMQASSPLL SQDLANNSLQKNGLKKASVASLKRQTGGQVLEESQVALSFLEWLASATERIHQAMHYQFDGKPEPLVFHVPQAFFEALQQ RICLGSVKMRLPNSTTAFVRKDALPLGTFSKYTWHITNILQVKQIFDTVEMPLEITRSFIQNRDGTYEPFRCPKVEVESI AETYGRLEKQPVLRPLELKTFLKVGNTSPDQKEPTPFIIEWIPDILPQSKIGELRIKFEYGHYRNGHPADYQEQRPSLDQ ALEIMPLTTLTFP |
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