Gene
| Gene Model ID | habu1_s2857_g10205 |
|---|---|
| Locus | habu1_scaffold2857 : 524340 ... 546713 : - |
| To GenomeBrowser | habu1_scaffold2857:524340..546713 |
| Genes list of scaffold | habu1_scaffold2857 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| beta-adducin isoform x1 | GO:0005198 GO:0008091 GO:0008290 GO:0016020 GO:0016023 GO:0030097 GO:0030507 GO:0032092 GO:0042803 GO:0046982 GO:0051015 GO:0051016 GO:0051017 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2857_g10205.t2 | 1 | 1 | Aldolase_II | 135 | 315 | 1.6e-38 | 132.1 | 1.90016e-42 | 2.9e-38 | 131.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2857_g10205.t2 | gi|589943909|ref|XP_006984652.1| | PREDICTED: beta-adducin isoform X2 [Peromyscus maniculatus bairdii] | 0.0 |
| habu1_s2857_g10205.t2 | gi|674096225|ref|XP_008821466.1| | PREDICTED: beta-adducin [Nannospalax galili] | 0.0 |
| habu1_s2857_g10205.t2 | gi|593747399|ref|XP_007128991.1| | PREDICTED: beta-adducin isoform X2 [Physeter catodon] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.8 |
| Venom grand-1 | 0.4 |
| Pit, infrared sensing | 0.7 |
| Nose | 6.2 |
| Brain-1 | 20.2 |
| Eye | 2.9 |
| fetal fibroblast | 0.2 |
| venom gland-2 | 0.2 |
| Brain-2 | 16.9 |
| Spleen | 0.3 |
| Lung | 0.9 |
| Liver | 0.0 |
| Kidney | 0.1 |
| Pancreas | 0.1 |
| Small intestine | 0.1 |
| Large intestine | 0.9 |
| Stomach | 1.1 |
| heart | 0.1 |
| ovary | 8.5 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s2857_g10205.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10205.t1 gtaccaactgcatgagggggcagagggaattttcgaatgaatgtgaaatggtctttctgtggtcttttggcttcgtcgga tacaagttctcatcctcttcctcagccatatcaactgtttgccctctcttgcccaacataaaataaatggttacaaggcc cagagcctttttctggatctgccttatgctccccaaagttcaaaaatgagtgacgaaaccattcccgaggaagtctccgc tctccctgctcaaagccaacattactttgaccgattctcagaagacgacccggagtacctgcgcatcaggaacatggctg cagacctgcgccaagacttcaacctgatggagcagaagaaaagagtcaccctgattctgcagagcccctcttttagggag gagctggagagtctcatccaagagcagatgaagaaaggaaacaactccaacatctgggcccttcagcagatagccgagtt catggccaccacggctccctccgtctttcctccgtcgcccttgaacctttccacagtgacacccatcaatgacctccata gcactgactctgtgtccctggccaaaggggagaggcttatgcgctgcaaagttagcagtgtctatcggctgctggacctt tatggctgggcacagctcagtggcaccacagtcacgctgagagtcagcaaagaacaggaacattttctggtttgtcccga aggcctttcctgtcatgaagttacagcatccagcttgattaaagtgaacatcctggggaaggtggtggagcaaggcagca gcagctttctggtggacacccaaggattcagcctgcactcggccatctatgcggctcggcctgatgtgagatgcatcatc catctgcacacaccagccacaactgcagtctccgcaatgaaacaaggcctcttgccaatttcccacgatgcactgctggc aggtgacatggtgtattttgacttcaatggtgaaatggagggagaggcagacagaattgagttgcagaaatgtcttggac ccacctgcaaggttttggtgctccggaatcatggcctggtgaccctgggagacacagtggaggaagcgttctacaaggtc ttccatttgcaggctgcctgtgaagtccaggttgctgccttgtctagtgctggtgggcctgagcatctcatcctcttgga ggcggagaaacacaggcctcacgatgtgggtctggtccgatgggctggcagcacctttgggcccatgcagaagagccgct tgggagagcatgaatttgaagcactaatgaggatgctggacaatctaggctaccggaccggctatgcttaccgttaccct tttgtccaggagaagacaaggcacaagagtgaggtggagatcccggccaccgtcactgcctttgtcttcgaagaggaggc gggccccatcttcacccaccggcaacacgcccagaaacaacagaaagaaaagacccgctggctgaacacccccaacacct acctgcgtgtgaaggtggccgaggacagccaaggcggtgccaaagccacgtggatgaaagcggacgacgtggagaaatcc agcagtggcatgccaatccgaattgaaaacccaaaccagtttgtgcctctctacacagacccacaagaagtcttggaaat gaggaacaagatccgagaacagaaccgccaggaggtgaaatcggccggaccccagtcccagctgctggctagcgtgatcg cagagcagagcaggagcccgtctaccgagagtcacttggctgatggagagacgaaggatgactcccgtgtggaggcctct cttgagcccgagtcccccaaccccttcagccagctaaccgatcaggaactggaggagtacaagaaagaggtggaaaggaa gaagctgggacttgacggtgaaaagaaggacagcggtccagaggaggaaatgacatcccctgaagaatccaccatcactc ctcccgaacagagccccacagagcctggggcaaagagccctgccaggtccccctccaaagctccagaaggcgggaagaaa cctgctgatcctgcctcagccgacaaggccgagccggaggcggtagtggtcaacgggaaagaagacgaccaaacagttga agagcacctcagcaaagggatcagccagctgaccaccaatgcagacaccactgagggcccaaaggacaaaaccgagtcgg tcaccggtgggcctgtggctgtctacactcttctgcttgactatccagtggtagtaaagcaattgtactcttctgccaag gtggtggtggccacccccaattccaacattgctaggccaaactgctaaatgtctgaataagagacttccctaaacagctt tttgtctcatctgatgaatctaaaaagaaaaagaatatgccaataaacttttaccagaataccaaattg |
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| Transcript ID | habu1_s2857_g10205.t2 |
| Definition | - |
>habu1_s2857_g10205.t2 gtaccaactgcatgagggggcagagggaattttcgaatgaatgtgaaatggtctttctgtggtcttttggcttcgtcgga tacaagttctcatcctcttcctcagccatatcaactgtttgccctctcttgcccaacataaaataaatggttacaaggcc cagagcctttttctggatctgccttatgctccccaaagttcaaaaatgagtgacgaaaccattcccgaggaagtctccgc tctccctgctcaaagccaacattactttgaccgattctcagaagacgacccggagtacctgcgcatcaggaacatggctg cagacctgcgccaagacttcaacctgatggagcagaagaaaagagtcaccctgattctgcagagcccctcttttagggag gagctggagagtctcatccaagagcagatgaagaaaggaaacaactccaacatctgggcccttcagcagatagccgagtt catggccaccacggctccctccgtctttcctccgtcgcccttgaacctttccacagtgacacccatcaatgacctccata gcactgactctgtgtccctggccaaaggggagaggcttatgcgctgcaaagttagcagtgtctatcggctgctggacctt tatggctgggcacagctcagtggcaccacagtcacgctgagagtcagcaaagaacaggaacattttctggtttgtcccga aggcctttcctgtcatgaagttacagcatccagcttgattaaagtgaacatcctggggaaggtggtggagcaaggcagca gcagctttctggtggacacccaaggattcagcctgcactcggccatctatgcggctcggcctgatgtgagatgcatcatc catctgcacacaccagccacaactgcagtctccgcaatgaaacaaggcctcttgccaatttcccacgatgcactgctggc aggtgacatggtgtattttgacttcaatggtgaaatggagggagaggcagacagaattgagttgcagaaatgtcttggac ccacctgcaaggttttggtgctccggaatcatggcctggtgaccctgggagacacagtggaggaagcgttctacaaggtc ttccatttgcaggctgcctgtgaagtccagggctaccggaccggctatgcttaccgttacccttttgtccaggagaagac aaggcacaagagtgaggtggagatcccggccaccgtcactgcctttgtcttcgaagaggaggcgggccccatcttcaccc accggcaacacgcccagaaacaacagaaagaaaagacccgctggctgaacacccccaacacctacctgcgtgtgaaggtg gccgaggacagccaaggcggtgccaaagccacgtggatgaaagcggacgacgtggagaaatccagcagtggcatgccaat ccgaattgaaaacccaaaccagtttgtgcctctctacacagacccacaagaagtcttggaaatgaggaacaagatccgag aacagaaccgccaggaggtgaaatcggccggaccccagtcccagctgctggctagcgtgatcgcagagcagagcaggagc ccgtctaccgagagtcacttggctgatggagagacgaaggatgactcccgtgtggaggcctctcttgagcccgagtcccc caaccccttcagccagctaaccgatcaggaactggaggagtacaagaaagaggtggaaaggaagaagctgggacttgacg gtgaaaagaaggacagcggtccagaggaggaaatgacatcccctgaagaatccaccatcactcctcccgaacagagcccc acagagcctggggcaaagagccctgccaggtccccctccaaagctccagaaggcgggaagaaacctgctgatcctgcctc agccgacaaggccgagccggaggcggtagtggtcaacgggaaagaagacgaccaaacagttgaagagcacctcagcaaag ggatcagccagctgaccaccaatgcagacaccactgagggcccaaaggacaaaaccgagtcggtcaccggtgggcctgtg gctgtctacactcttctgcttgactatccagtggtagtaaagcaattgtactcttctgccaaggtggtggtggccacccc caattccaacattgctaggccaaactgctaaatgtctgaataagagacttccctaaacagctttttgtctcatctgatga atctaaaaagaaaaagaatatgccaataaacttttaccagaataccaaattg |
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Protein
| Protein ID | habu1_s2857_g10205.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10205.t1 MSDETIPEEVSALPAQSQHYFDRFSEDDPEYLRIRNMAADLRQDFNLMEQKKRVTLILQSPSFREELESLIQEQMKKGNN SNIWALQQIAEFMATTAPSVFPPSPLNLSTVTPINDLHSTDSVSLAKGERLMRCKVSSVYRLLDLYGWAQLSGTTVTLRV SKEQEHFLVCPEGLSCHEVTASSLIKVNILGKVVEQGSSSFLVDTQGFSLHSAIYAARPDVRCIIHLHTPATTAVSAMKQ GLLPISHDALLAGDMVYFDFNGEMEGEADRIELQKCLGPTCKVLVLRNHGLVTLGDTVEEAFYKVFHLQAACEVQVAALS SAGGPEHLILLEAEKHRPHDVGLVRWAGSTFGPMQKSRLGEHEFEALMRMLDNLGYRTGYAYRYPFVQEKTRHKSEVEIP ATVTAFVFEEEAGPIFTHRQHAQKQQKEKTRWLNTPNTYLRVKVAEDSQGGAKATWMKADDVEKSSSGMPIRIENPNQFV PLYTDPQEVLEMRNKIREQNRQEVKSAGPQSQLLASVIAEQSRSPSTESHLADGETKDDSRVEASLEPESPNPFSQLTDQ ELEEYKKEVERKKLGLDGEKKDSGPEEEMTSPEESTITPPEQSPTEPGAKSPARSPSKAPEGGKKPADPASADKAEPEAV VVNGKEDDQTVEEHLSKGISQLTTNADTTEGPKDKTESVTGGPVAVYTLLLDYPVVVKQLYSSAKVVVATPNSNIARPNC |
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| Protein ID | habu1_s2857_g10205.t2 |
| Definition | - |
>habu1_s2857_g10205.t2 MSDETIPEEVSALPAQSQHYFDRFSEDDPEYLRIRNMAADLRQDFNLMEQKKRVTLILQSPSFREELESLIQEQMKKGNN SNIWALQQIAEFMATTAPSVFPPSPLNLSTVTPINDLHSTDSVSLAKGERLMRCKVSSVYRLLDLYGWAQLSGTTVTLRV SKEQEHFLVCPEGLSCHEVTASSLIKVNILGKVVEQGSSSFLVDTQGFSLHSAIYAARPDVRCIIHLHTPATTAVSAMKQ GLLPISHDALLAGDMVYFDFNGEMEGEADRIELQKCLGPTCKVLVLRNHGLVTLGDTVEEAFYKVFHLQAACEVQGYRTG YAYRYPFVQEKTRHKSEVEIPATVTAFVFEEEAGPIFTHRQHAQKQQKEKTRWLNTPNTYLRVKVAEDSQGGAKATWMKA DDVEKSSSGMPIRIENPNQFVPLYTDPQEVLEMRNKIREQNRQEVKSAGPQSQLLASVIAEQSRSPSTESHLADGETKDD SRVEASLEPESPNPFSQLTDQELEEYKKEVERKKLGLDGEKKDSGPEEEMTSPEESTITPPEQSPTEPGAKSPARSPSKA PEGGKKPADPASADKAEPEAVVVNGKEDDQTVEEHLSKGISQLTTNADTTEGPKDKTESVTGGPVAVYTLLLDYPVVVKQ LYSSAKVVVATPNSNIARPNC |
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