Gene
| Gene Model ID | habu1_s2857_g10208 |
|---|---|
| Locus | habu1_scaffold2857 : 610408 ... 622813 : - |
| To GenomeBrowser | habu1_scaffold2857:610408..622813 |
| Genes list of scaffold | habu1_scaffold2857 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| substance-p receptor | GO:0004930 GO:0007186 GO:0016020 GO:0071944 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2857_g10208.t1 | 1 | 1 | 7TM_GPCR_Srsx | 49 | 325 | 4.4e-08 | 32.6 | 1.1e-11 | 5.6e-08 | 32.2 |
| habu1_s2857_g10208.t1 | 1 | 1 | 7tm_1 | 54 | 310 | 0.0 | 212.2 | 0.0 | 0.0 | 211.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2857_g10208.t1 | gi|557325531|ref|XP_006035767.1| | PREDICTED: substance-P receptor [Alligator sinensis] | 0.0 |
| habu1_s2857_g10208.t1 | gi|564266343|ref|XP_006271993.1| | PREDICTED: substance-P receptor [Alligator mississippiensis] | 0.0 |
| habu1_s2857_g10208.t1 | gi|558189733|ref|XP_006129164.1| | PREDICTED: substance-P receptor [Pelodiscus sinensis] | 0.0 |
| habu1_s2857_g10208.t1 | gi|530651902|ref|XP_005312301.1| | PREDICTED: substance-P receptor isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s2857_g10208.t1 | gi|701425861|ref|XP_010002222.1| | PREDICTED: substance-P receptor [Chaetura pelagica] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.2 |
| Venom grand-1 | 0.4 |
| Pit, infrared sensing | 0.6 |
| Nose | 0.3 |
| Brain-1 | 2.1 |
| Eye | 0.6 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.3 |
| Brain-2 | 4.3 |
| Spleen | 0.1 |
| Lung | 0.4 |
| Liver | 0.0 |
| Kidney | 0.1 |
| Pancreas | 0.4 |
| Small intestine | 0.2 |
| Large intestine | 2.2 |
| Stomach | 0.6 |
| heart | 0.3 |
| ovary | 0.3 |
| cheek muscle | 4.3 |
Transcript
| Transcript ID | habu1_s2857_g10208.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10208.t1 gcggcgggaggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnngccggcggggatggaggcgagcgcggcggcggcggcggcggcggccaacggctcagacggc ggcggctcaggcgggggcggcgaggagggcaaccccttcgagcagccggcctggcaggtcgcgctgtggtcggcggcgta cgcgctggtggtgctggtctcggtggtgggcaacctggtggtgatctggatcgtgctggcccaccggcggatgcgcaccg tcaccaactatttcctggtcaacctggccttcgccgaggccgccatggccgccttcaacacgctggtcaacttcacctac gccgtgcacaacgtctggtactacgggctggcctactgccgcttccagaacttcttcccggtggcctccgtcttcgccag catctactccatgacggccatcgccgccgacaggtacatggcgattatccatcctctgcaaccaaggctatcagctgcag ccaccaagattgtcatctgtgttatatgggtgttggctttgctactctccttccctcaaggatactattccaccacagcg gagctgcctgagcgagtggtgtgctttgtcgaatggccgcaaaatcagacccaggtctctccaataacgtatcagatctg catgactattctagcctacatcttgcctctcataatgataggctacgcctatattatggtgggcattaccctatgggcca gtgcgataccaggggactcttcggaccgctaccatgaacaagtgtctgccaagcgcaaggttgtcaagatgatgatcatt gtggtttgcacctttgccatttgctggctgccttaccatgtctacttcctcctacaactgttcaacggtgagatgttctc agaaaaatacatccagcaggtctacctggctatcctgtggctggccatgagctccaccatgtacaacccaattatttact gttgtctcaatgacaggttccgggtgggcttcaagcgggctttccggtggtgccccttcatcaatgccagcgaatatgaa ggactggaaatgaagtcagcgaggtacctgcaggcccagagcagcatgtacaaggccagccggatggagacgacggtctc ttcggtcactgccaacccagaggaggaactggatgatggcagcagacccaggcgcccctctgtggatctgacctccaacg gctcttcccgcagtgacacgaaaaccatctcggagagcctgagcttctattccaatacgcttccctgagcaaactcacaa cttagccacagtgacaccatttccatccctctaatgaagccacaaccaacccccaacaatcaggtccttcctgtgactgg ccagtgagctttccttctcgctccaaagggttctgcctgatgttgctgttctccacgcataagaggcttcctggtcatgg atcctgtgtattcctcccacctggtctttcctccaggatgtttaggtcctctggtcatcttctctccatcaagttgccat tgtggaagaagcaaatgtgactgaaatgtgtttgggagtttttggaagggcgcaaatgaaatgtgtacaaagttgcagtt taaacattaattcttcttggaacttaattcaaaacccatttctacaacagaacatttgaatttataatatttttaatact attttgttccattagaggactttcagttactttccttgagtaactggtatacttccaggatcacttttcttccatccgtt catcactgtgttttaccagggttggggagaggtccttgaccacttctagtgaggtgaattaattctatttgaggagctct gcctttaccataagatatggttcgaggctgtgctcaacattttcttagtgcttagtcccctcagtgcaaacattagaacc attaagtgtagataaccacaagaagaaaggttcaactcggttttctattagcaagaaaatgttcttctttcataggaaaa ggataacccatgcatagcagccctacagccatccacccaaagcatcatctgggatgttccagaatctcccaacatgacca tgtgaattggccataacatgcttgaaacttccttgaagtttgcggattacgtgactagcaaagcagagaagagggaaggg ctgtcacctgtctacctgcaagcatcaggaatgatgcctttttgcaaccaactcagctgagcagctggcaaaggaccaaa atgaatgtaatgtgattgtaatgcagagcctgttttagaaattccaaggctacaggaggcacctgaagtctctcaccatg gccgaagtgctgcatcagctcattcttacaaaagtgacaatagcacaatattagctctgttacacagaagagagtgggac gaacacttgctcaagccagtatgaaaaatcttcactaacaagattacaaactagagtcagtggttccgttacctgccatc tttgaacatatgtctgtctgcatctatctacaatacctttataacaaaactcttgtgtggcagaatatttttcattgtgt actgtgttgtgcaaccacacagcagctaggaggtaatttttgactgtcctgaaaaatgttacaacccagttttccacaga cacaaagctgagcccaacagttgtccaaaaattcctgcagtatttccacaaatggcaaaaggtcagtgtcacggaacaca cgttgcccattccatctgcatcaaggtcctcttgcaaacatgcaataaagaaaatgattaagtccaaacca |
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Protein
| Protein ID | habu1_s2857_g10208.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10208.t1 MEASAAAAAAAANGSDGGGSGGGGEEGNPFEQPAWQVALWSAAYALVVLVSVVGNLVVIWIVLAHRRMRTVTNYFLVNLA FAEAAMAAFNTLVNFTYAVHNVWYYGLAYCRFQNFFPVASVFASIYSMTAIAADRYMAIIHPLQPRLSAAATKIVICVIW VLALLLSFPQGYYSTTAELPERVVCFVEWPQNQTQVSPITYQICMTILAYILPLIMIGYAYIMVGITLWASAIPGDSSDR YHEQVSAKRKVVKMMIIVVCTFAICWLPYHVYFLLQLFNGEMFSEKYIQQVYLAILWLAMSSTMYNPIIYCCLNDRFRVG FKRAFRWCPFINASEYEGLEMKSARYLQAQSSMYKASRMETTVSSVTANPEEELDDGSRPRRPSVDLTSNGSSRSDTKTI SESLSFYSNTLP |
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