Gene
| Gene Model ID | habu1_s2857_g10213 |
|---|---|
| Locus | habu1_scaffold2857 : 745883 ... 756243 : - |
| To GenomeBrowser | habu1_scaffold2857:745883..756243 |
| Genes list of scaffold | habu1_scaffold2857 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| germ cell-less partial | GO:0005635 GO:0006355 GO:0016363 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s2857_g10213.t1 | 1 | 1 | BTB | 13 | 119 | 6.6e-15 | 55.0 | 5.9e-18 | 4.4e-14 | 52.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s2857_g10213.t1 | gi|557319591|ref|XP_006032958.1| | PREDICTED: germ cell-less protein-like 1, partial [Alligator sinensis] | 0.0 |
| habu1_s2857_g10213.t1 | gi|514794217|ref|XP_005030868.1| | PREDICTED: germ cell-less protein-like 1-like [Anas platyrhynchos] | 0.0 |
| habu1_s2857_g10213.t1 | gi|697466715|ref|XP_009667688.1| | PREDICTED: germ cell-less protein-like 1 [Struthio camelus australis] | 0.0 |
| habu1_s2857_g10213.t1 | gi|700352479|ref|XP_009920448.1| | PREDICTED: germ cell-less protein-like 1, partial [Haliaeetus albicilla] | 0.0 |
| habu1_s2857_g10213.t1 | gi|530582854|ref|XP_005285268.1| | PREDICTED: germ cell-less protein-like 1 isoform X1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 16.8 |
| Venom grand-1 | 21.2 |
| Pit, infrared sensing | 18.2 |
| Nose | 22.3 |
| Brain-1 | 12.3 |
| Eye | 15.2 |
| fetal fibroblast | 32.3 |
| venom gland-2 | 31.2 |
| Brain-2 | 12.4 |
| Spleen | 21.0 |
| Lung | 13.7 |
| Liver | 15.1 |
| Kidney | 16.1 |
| Pancreas | 11.6 |
| Small intestine | 11.0 |
| Large intestine | 13.7 |
| Stomach | 13.9 |
| heart | 9.2 |
| ovary | 64.3 |
| cheek muscle | 32.4 |
Transcript
| Transcript ID | habu1_s2857_g10213.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10213.t1 gaaaaaactaaaaagcacttcgaagtatatttatcagactctgtttctgaatggtgaaaagagtgatgttaaaatatgtg ccctgggagaagaatggaacttacacaagatatacctctgtcagtctggctacttttcaagtatgttcagtgggtcttgg agggagtcaggaatggacaaaatagaattggaaattcctgatcagaatattgacatagaagccttacaggttgcctttgg ctcactttaccgggatgaagtgttaataaaccctagtagagtgattgccctcctggcagctgccagcatgttacagctgg atggcttaatacagcaatgtggtgagacaatgaaggaaacaattaatgcaaaaactgtgtgtagttactataattctgcg ggaacatatggattagattctttgaaaaaaaagtgtcttgagtggctcttgaataacctgatgacccaccagagtgtgga actcctcaaagaactcagcataaacctcatgaaacagctgattagttcctctaacctgtttgtcatgcaagtggagatgg acatatatactgctctaaagaagtggatgttccttcagctggtgccttcttggaacggatcattgaaacagcttttaagt gaagcagatgcctggttttccaagcgcaggaaagattttgaggaaggcatctcattcttggaaactgaacaaggacatgc atttataccagtgttcaaatacctgaggctgcagtatataatcagtgatctgacatcagcaagaattgttgaacgagaca gcctgatccctgcaaactggctgttctctgtttacaaacagcagtggtttgccatgcttagagcagaacaagacaatgac attgggcctcaagagattaataaagaggaactagaagcaaacagtatgcggtgtggcagaaaacttgccaaagatggtga ttattgctggcgatggacaggctttaattttggctttgatctgctggtcacatacaccaatcgttacattatcttcaaac gcaacacactaaatcaaccctgcagcggctctgtcagtttgcaaccccggagaaatatcgctttcaggctgagactggct tcttttcatagcagtggaaagcttatttgtagcagaactgcaggatatcagatactaaccctcgaaaaagatcaggagca ggtagtgatgaatttggacagtagattgctagtcttccctctctatatctgctgcaacttcctgtatacttccccagaaa agagaagagaaaacaatggagaatgaataacccagccagctgagattgacttttgaaatgtctttgcatggtcactttca tttggaagctcctaatgccctgaaaggaacatcatggaatggtcttatctattgaagaaaaagaaagagggactgggtac aagccccagcagctccagttggcatgactaactggtgtggtatgttggaagctatagttttgtggaattgtgagccacag gctgtagcaaataaatgtaactcccacctcatctctcgacattcctacgcacatctgaatagctgaatacttacgatgac ctcgttttctcctgagaattctcagccctagaaaatgataccagtctcctgacagcacagaaagactttgaacatagttc attaactgggcctgcttaaagggagtaggatgatatatcaataaagcccacattaatttttaatagaacacactgtattt atggtttcttgatttgttctggtcaagcccttaatttttaaaagtctgttactggctcggtgaaatatctggattgtttt aaattcattatacttgtaaatacttcctattgagttgaaaactttataatatatcctgttttgttttcaagaaatacata tttttaaacattgtatttttaagagtcactttgtagaatccagctgcctcaattcagcatttctaattcatcagaactca gaccatcatttcattcttggatatacttttttactttttggtttttaacttgaagcaaaaaagcactcccaaaccccgaa gcgagtgggtcagcctctgctaatcaggaggccacatccagcccaggagaaatagggctacagctgagaattgccttttg acccccaggtctgtctgatggcttctgctctgaggccagaaggctccccgggggaaattctggatcctgtgtagctttca aggcacccaagttccatgagtctgcagatacatgcagcagaacaacaagtctctggactacaagaagccaaatggtcact aaatacaagctttggaaggccctttttttttttttttactgaaatcagacttggggctgaatataaatcccttctttggg aatttagaacttttgagttgtattttttatttgaacactttaccttgcataagataagattgctattccaaatattgtct atccttaaacacttgctaaaatatttaattcgaaatatacctttcatgacttatggcttgttcaggacagtgaatcaatg acagattgaaaataaactatctgtaatttagaattctt |
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Protein
| Protein ID | habu1_s2857_g10213.t1 |
|---|---|
| Definition | - |
>habu1_s2857_g10213.t1 KKLKSTSKYIYQTLFLNGEKSDVKICALGEEWNLHKIYLCQSGYFSSMFSGSWRESGMDKIELEIPDQNIDIEALQVAFG SLYRDEVLINPSRVIALLAAASMLQLDGLIQQCGETMKETINAKTVCSYYNSAGTYGLDSLKKKCLEWLLNNLMTHQSVE LLKELSINLMKQLISSSNLFVMQVEMDIYTALKKWMFLQLVPSWNGSLKQLLSEADAWFSKRRKDFEEGISFLETEQGHA FIPVFKYLRLQYIISDLTSARIVERDSLIPANWLFSVYKQQWFAMLRAEQDNDIGPQEINKEELEANSMRCGRKLAKDGD YCWRWTGFNFGFDLLVTYTNRYIIFKRNTLNQPCSGSVSLQPRRNIAFRLRLASFHSSGKLICSRTAGYQILTLEKDQEQ VVMNLDSRLLVFPLYICCNFLYTSPEKRRENNGE |
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