Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s3002_g10669
Locus habu1_scaffold3002 : 1 ... 75983 : +
To GenomeBrowser habu1_scaffold3002:1..75983
Genes list of scaffold habu1_scaffold3002

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s3002_g10669.t1 1 1 NYAP_N 4 344 0.0 399.3 0.0 0.0 399.3
habu1_s3002_g10669.t1 1 1 NYAP_C 351 646 0.0 158.0 0.0 0.0 157.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s3002_g10669.t1 gi|602627144|ref|XP_007420521.1| PREDICTED: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2 [Python bivittatus] 0.0
habu1_s3002_g10669.t1 gi|541983883|ref|XP_005443790.1| PREDICTED: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2 [Falco cherrug] 0.0
habu1_s3002_g10669.t1 gi|637277068|ref|XP_003218310.2| PREDICTED: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2 isoform X4 [Anolis carolinensis] 0.0
habu1_s3002_g10669.t1 gi|564260278|ref|XP_006269053.1| PREDICTED: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2-like [Alligator mississippiensis] 0.0
habu1_s3002_g10669.t1 gi|558147780|ref|XP_006119965.1| PREDICTED: neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 2 [Pelodiscus sinensis] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.1
Brain-1 2.7
Eye 0.1
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 1.9
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.0
ovary 0.0
cheek muscle 0.0

Transcript
Transcript IDhabu1_s3002_g10669.t1
Definition-
>habu1_s3002_g10669.t1
cttaggtggtgaagtgggaaaagcaaacgaaggaggctacatagggaaacattttcgtatgggatttatgacgatgcctg
cacctcaggacagactgccccacccttgttcaagtggctttaccgtaagatcccaatcactacattctgttggaggcact
gatgatgaaagcagtagctgctcccggaagcaaccaccaccaaaacccaaacgagaccccagtaccaaactaagcacatc
ctctgaaactgtaaatgctggaacaacaagtaagagtgtaaagctgccagacaggactgaagtacccaccaagccaaggc
ctcacagtgatgaatacaccaagaaggttcctcccccaaagccaaagcggaatccaaacactcaactaagtgcatctttt
gatgaaacctatatcaaaaagcatggctccataaagtctgtgctaagtagagattcttctttgacccaagtcagcagtcc
tgctccagatgcagaggaagaagagccagtttatatcgaaatggttggaaatatattaagagacttcaaaaaagatgagg
aagatcaaaatgaggcggtgtatgaagaaatgaaatatcccatctttgaggatggaggccaagattcaaagtgtccatgt
gagtttgaccatcacagctgttcctctcagtgtgctactcccacagtgcctgaccttgatttcaccaagccctcagtgcc
acccactcccaaaggtgtgatttgtgatatcccaccaccattcccaaatttgcttcctcacagaccaccactcttggtat
tcccacctgcaccagtgcaatgttccccaaattctgacgaatctcctttaacacctttagaagtcacaaagcttcccgta
ttagaaaatgtgtgttacattaaacagcaaactggagtgtctccatcatcattgccacctcatactccaagtcatcaaaa
actagagaaagaccagacagcttcccatggaactagtactccagggcactcctcttcacctcctcatccttctaccctat
acagaacacagtctccccatggctattccaaaagccactcggcctctccctctcctgtgagtatgggtcggtcacttact
cctttaagtctcaaaagacctcctccttatgattctgtacattcaggaagtctctcaagaagttctccatcagtgcctca
ttctactgccagaaacatattgcaagaaggagggaaaatggtaaatgcctctgtcaacacctacgggtcatcatcacaga
gtacttcacgttctagaacacccactagtcctctggaggaattaaccagcctttttacctcaggacgaagtttactgagg
aaatcttccagtggaagaaaatctaaagagcctgcagaaaaaccattagaggaactaaagatcagaagtcacagtactga
accattaccaaagctggaaaacaaagaaaaaggaggtcatcatggatcatcttccagagagccagtaaaagctcaggaat
gggatggaacaccaggaccatcacttgtgtctagccgacttggaaggtcttctgttagtccaaccatgttggcaggaaat
aataattcagaactgaaatcaagctgcagattagggagatctgcttccacatcaggtgttcctcctccctctgttcctcc
tctcaggccagccagtgaactgcaaccgagccaggtgacatgcatgcagtggttgcatggagaccatacaatgctggaaa
tgattgagaaaaaacgttgcctgtgcaaagaaatcaaggcacgacagaaatcagagaaaggactttgcaaacaagacagc
atgcctatcctgccaagttggaaaaaaagcacaggaaccaagaaatacagtcctcctccatattccaagcaacaaactgt
tttctgggatactgcaatatgatacgtccatggggattatttatcttccatacattcctgaagagtgcactgtcagagta
cctttctagaaaggtagttgctagaatctaatttctggtgaagaactacctaggaagaaagcttactaaaatggtacctt
cctgtccatcagaccccagtctatgtctcccactgaaatgaaggcatgcaccttttctgaggattcttttggaccaagaa
aaagagtaagatgtaaatattttccaaatctctttaaaagaaaacccaagttaatacactttttcaaatataatgcaaat

Protein
Protein IDhabu1_s3002_g10669.t1
Definition-
>habu1_s3002_g10669.t1
LGGEVGKANEGGYIGKHFRMGFMTMPAPQDRLPHPCSSGFTVRSQSLHSVGGTDDESSSCSRKQPPPKPKRDPSTKLSTS
SETVNAGTTSKSVKLPDRTEVPTKPRPHSDEYTKKVPPPKPKRNPNTQLSASFDETYIKKHGSIKSVLSRDSSLTQVSSP
APDAEEEEPVYIEMVGNILRDFKKDEEDQNEAVYEEMKYPIFEDGGQDSKCPCEFDHHSCSSQCATPTVPDLDFTKPSVP
PTPKGVICDIPPPFPNLLPHRPPLLVFPPAPVQCSPNSDESPLTPLEVTKLPVLENVCYIKQQTGVSPSSLPPHTPSHQK
LEKDQTASHGTSTPGHSSSPPHPSTLYRTQSPHGYSKSHSASPSPVSMGRSLTPLSLKRPPPYDSVHSGSLSRSSPSVPH
STARNILQEGGKMVNASVNTYGSSSQSTSRSRTPTSPLEELTSLFTSGRSLLRKSSSGRKSKEPAEKPLEELKIRSHSTE
PLPKLENKEKGGHHGSSSREPVKAQEWDGTPGPSLVSSRLGRSSVSPTMLAGNNNSELKSSCRLGRSASTSGVPPPSVPP
LRPASELQPSQVTCMQWLHGDHTMLEMIEKKRCLCKEIKARQKSEKGLCKQDSMPILPSWKKSTGTKKYSPPPYSKQQTV
FWDTAI

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