Gene
| Gene Model ID | habu1_s3002_g10679 |
|---|---|
| Locus | habu1_scaffold3002 : 609958 ... 632119 : + |
| To GenomeBrowser | habu1_scaffold3002:609958..632119 |
| Genes list of scaffold | habu1_scaffold3002 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3002_g10679.t1 | 8 | 1 | WD40 | 85 | 119 | 0.0 | 286.1 | 1.1e-10 | 2.3e-07 | 30.4 |
| habu1_s3002_g10679.t1 | 8 | 2 | WD40 | 123 | 162 | 0.0 | 286.1 | 1.4e-12 | 2.9e-09 | 36.4 |
| habu1_s3002_g10679.t1 | 8 | 3 | WD40 | 166 | 204 | 0.0 | 286.1 | 1.8e-13 | 3.9e-10 | 39.2 |
| habu1_s3002_g10679.t1 | 8 | 4 | WD40 | 209 | 246 | 0.0 | 286.1 | 1.2e-10 | 2.5e-07 | 30.2 |
| habu1_s3002_g10679.t1 | 8 | 5 | WD40 | 253 | 288 | 0.0 | 286.1 | 8.0e-11 | 1.7e-07 | 30.8 |
| habu1_s3002_g10679.t1 | 8 | 6 | WD40 | 292 | 330 | 0.0 | 286.1 | 2.4e-12 | 5.1e-09 | 35.6 |
| habu1_s3002_g10679.t1 | 8 | 7 | WD40 | 335 | 372 | 0.0 | 286.1 | 3.9e-14 | 8.2e-11 | 41.3 |
| habu1_s3002_g10679.t1 | 8 | 8 | WD40 | 376 | 413 | 0.0 | 286.1 | 1.2e-15 | 2.5e-12 | 46.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3002_g10679.t1 | gi|602627104|ref|XP_007420501.1| | PREDICTED: dynein assembly factor with WDR repeat domains 1 [Python bivittatus] | 0.0 |
| habu1_s3002_g10679.t1 | gi|637276921|ref|XP_003218305.2| | PREDICTED: dynein assembly factor with WDR repeat domains 1 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s3002_g10679.t1 | gi|558147696|ref|XP_006119947.1| | PREDICTED: dynein assembly factor with WDR repeat domains 1 [Pelodiscus sinensis] | 0.0 |
| habu1_s3002_g10679.t1 | gi|557275099|ref|XP_006020796.1| | PREDICTED: dynein assembly factor with WDR repeat domains 1 [Alligator sinensis] | 0.0 |
| habu1_s3002_g10679.t1 | gi|591360251|ref|XP_007055049.1| | PREDICTED: dynein assembly factor with WDR repeat domains 1 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.3 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 2.6 |
| Nose | 16.6 |
| Brain-1 | 3.8 |
| Eye | 0.4 |
| fetal fibroblast | 0.2 |
| venom gland-2 | 0.2 |
| Brain-2 | 3.9 |
| Spleen | 0.2 |
| Lung | 2.3 |
| Liver | 0.1 |
| Kidney | 0.2 |
| Pancreas | 0.0 |
| Small intestine | 0.1 |
| Large intestine | 0.1 |
| Stomach | 0.1 |
| heart | 0.0 |
| ovary | 2.4 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s3002_g10679.t1 |
|---|---|
| Definition | - |
>habu1_s3002_g10679.t1 tttgtctggtttctatgacaacgactccagttctaagttttcggtggccggagacaagatgaagctgaagcggttcttgc tgcgatattacccgccgggcattattttggaatatattcaaagtggagaactgaaaaccaaatccatagatttactagat ctcaatactgcaactgatgtagaagccttagtagaagatattagaaaagcagaacctctcatcacacagtcacggaaaga tcaggttgtacatttaattctacgattgcaagagaagctaggacaagtggaccacaagttctatctttttaaggtacttc gagcacatatattgccactcaccaatgttgcctttaacaaatctggttcttgctttatcactggaagttatgaccgaaca tgcaaactatgggatacagcaacaggagaagaattacgttctctggaaggtcatagaaatgtggtgtacgcaattgcttt caataatccttatggtgacaagattgctactggatcatttgataaaacctgcaaattatggagtgtagacacaggaaaat gctattatacttttagaggacatactgcagaaattgtttgcttatcatttaatcttcaaagcacactagttgcaactgga agcatggatactacggctagactatgggacatacagaatggagaagaagtagtcagattaacaggacattctgcagagat aattgcgttatcgtttaacaccacaggagacaaaatcatcacaggttctttcgaccatacagttgcagtatgggatgtta gcacgggcaggagaatgcatactttaataggccatcgtgcagaaataagcagcgcacaattcaactgggattgtactctg atcatcactggatctatggacaaaacatgcatgctttggaatgctttgacaggcaagcgggtagcaaccttaacaggcca tgatgatgaagtattagatgtttgttttgattatactggccagcgtattgcaagtgcctcagctgatggatcagcaagag tatatgattcagaaacaaaaaaatgtattgcaaaacttgaaggccattcaggagaaatttcaaagatctgtttcaatccc caaggaagtcgtattcttacagccagttcagataagacagctcgtctttgggagcctaagatgggacagtgcgttcaaat attggaaggccacactgatgagatattttcctgtgctttcaattacaaagggaatataattattacaggaagcaaagata atacatgtaggatatggcgctaattgggacaaaggctgacccacatctctaggaatgttaattcagtgtttttatataga caataatctttaaaaatctgctttttgcatctgtcttttttattctttatgtagcagaattatttcttggacttattgta ataattaacctggctagctatgtaaaaatgtgttattgagaaaattataagaaatgcttttttcctctaaagatggctaa ttggagtgagaagtctttatcatactattagttgttactcttgcattcatttagatatcttaccttacaaggtttaattt ttatttaataaaacatttcaatatgcataatgta |
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Protein
| Protein ID | habu1_s3002_g10679.t1 |
|---|---|
| Definition | - |
>habu1_s3002_g10679.t1 MKLKRFLLRYYPPGIILEYIQSGELKTKSIDLLDLNTATDVEALVEDIRKAEPLITQSRKDQVVHLILRLQEKLGQVDHK FYLFKVLRAHILPLTNVAFNKSGSCFITGSYDRTCKLWDTATGEELRSLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKL WSVDTGKCYYTFRGHTAEIVCLSFNLQSTLVATGSMDTTARLWDIQNGEEVVRLTGHSAEIIALSFNTTGDKIITGSFDH TVAVWDVSTGRRMHTLIGHRAEISSAQFNWDCTLIITGSMDKTCMLWNALTGKRVATLTGHDDEVLDVCFDYTGQRIASA SADGSARVYDSETKKCIAKLEGHSGEISKICFNPQGSRILTASSDKTARLWEPKMGQCVQILEGHTDEIFSCAFNYKGNI IITGSKDNTCRIWR |
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