Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s3002_g10680
Locus habu1_scaffold3002 : 632296 ... 698007 : -
To GenomeBrowser habu1_scaffold3002:632296..698007
Genes list of scaffold habu1_scaffold3002

Annotation by Blast2GO
Annotation GO
a-kinase anchor protein partial GO:0016301 GO:0016310 GO:0043227 GO:0043229 GO:0044444

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s3002_g10680.t1 1 1 AKAP_110 1580 1669 6.6e-11 40.9 9.1e-15 1.4e-10 39.9

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s3002_g10680.t1 gi|602627146|ref|XP_007420522.1| PREDICTED: A-kinase anchor protein SPHKAP, partial [Python bivittatus] 0.0
habu1_s3002_g10680.t1 gi|637276933|ref|XP_008104439.1| PREDICTED: A-kinase anchor protein SPHKAP isoform X1 [Anolis carolinensis] 0.0
habu1_s3002_g10680.t1 gi|637276936|ref|XP_008104440.1| PREDICTED: A-kinase anchor protein SPHKAP isoform X2 [Anolis carolinensis] 0.0
habu1_s3002_g10680.t1 gi|637276940|ref|XP_008104441.1| PREDICTED: A-kinase anchor protein SPHKAP isoform X3 [Anolis carolinensis] 0.0
habu1_s3002_g10680.t1 gi|637276944|ref|XP_008104442.1| PREDICTED: A-kinase anchor protein SPHKAP isoform X4 [Anolis carolinensis] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.3
Venom grand-1 0.1
Pit, infrared sensing 0.4
Nose 2.2
Brain-1 9.8
Eye 11.1
fetal fibroblast 0.0
venom gland-2 2.2
Brain-2 8.6
Spleen 0.1
Lung 0.8
Liver 0.0
Kidney 0.1
Pancreas 0.1
Small intestine 0.1
Large intestine 0.2
Stomach 0.1
heart 0.0
ovary 0.5
cheek muscle 0.0

Transcript
Transcript IDhabu1_s3002_g10680.t1
Definition-
>habu1_s3002_g10680.t1
tctttttgcattgccagcaatggggtgggcgcaactttggtatgatgaaactggcccgtgggccagcagtttgacctccc
tggtataggtggtaccttgcttagtagtagtaactgtgagagggatctcagagtcctaagaatctaagctatataattct
ggaatagataatttttggctctcattcgccgcagaaaatgacgacggccgcggattcgagcctcaaggtctctccgagca
actttgaatgtcccttgatgtacgaaatttcgcactatggtgacacagataatagtgtcagaagttcggtcacagcatgt
aagaaggttctttgcagtaatagcctgctagaatcaacagactattggctccaaaatcagaagacaccaagtcgaattgg
catcatggaggataagatggataagaattgcacttctgtgtgctttgtgaatctggatgcaggcaaggctgattacaaca
gtgaattcatgaaacagaaactggtcaatatctctccaaatcttccaaagtttattgcctcaatgaatgtacagccacca
aaagacaatgaaattattttcctgagtggattaacttcagaaaatcttcaggctgattttgaagtgccccagtgttcttg
gctggcagatgtatgtcttcttcagtgtgcaagaggaaacagaaggaagaacacaagctgcatcatctttgaaataaaca
agtttctgatcggcctggagctcatgcaggaaaagcagctgcatgtagaggctggcagcttaaagccagaagatgatact
aactgctctgtgtcttcaatagaagaagattttctcacagcatcagaacactttgaagatgaggatgatgaatataaaca
gggtgatgaaaatctgcatcttgaagctgaattcaaaaagtatagggaagaagattgtgaagacttgcattgcaaaaagg
cccaagtgcccttttttctgaaaggtagttgcctcagccatgatagcacagcttctactagaacttcagagtcatctgaa
gaagaatataatagtgaagctgaagacagtgttttacaaactgtagatgaagccattaagcagcttaattggaaagttgg
aaagtataatacaattggaaaatgtaagccactctcttgtgctgatcagaaagacttttgcaaaagtgataatatatcag
aaaatgtatgtttgaccctaacaactaaagaggatgtgattttatcggatgatctagctgcaggacaaaaaagtcatttg
gacatgttaaattgtagagttgaaaaaacacctcatcctctcattcaaaatgatcaagctcctacaggtcagtttgctac
aaatttggcagagtctgtcctgcaagatgcattcattagattgtctcagtcaacttttaccaaagaaactgccctcagca
tctctgtcagcaaccctttaacttcaacagcatgtgcaacacagaatgaaatggcttgccggtcatggaatgtacttcca
aaaattgttattgttcagagtccagatgggtctgataaatctgagtggcctgggtctaactttccaagcttacatccttg
gtctgaagttgaacattgttctggtgcagattttttccaaaacaataggactcagagtcctttggaagtagctttggcct
gtgcagctactgtcattggtaccatttcaagtccacatgctgcagaaaagctcagcgaacaggaatccatgagttctgca
atggctgtcaaggagaaaagtgccctaagtaccaacagtaattgtaactctatggagtactcatttccacctgccctttc
acacatggctcagatggcaaatgtagttgctgttcatggacttggtggaaaaaaagatatctatcctgtaacttcaagtg
gactcttatctgcagctgagacatcagcagctgttacgctccattgtagcatagctattggaagcactatggagaatctg
aacaatagcattgcacaagtcttgttcaaagaggcatctctagtattaaccagacctcatgcatacagaactataggaga
atttatggagtctctaaatggaaaaattgttcaggctgcaacaaagccctcaactgcctttctggatgaagtcattgttg
atgaacttgctcagaatttgtccaatattattctgaggcattctgtggaggaagttagaaagaaacaacgttcagaagag
aacataggagcatgtttagaaaacacacaagatgtttttactgcaactgcaaatcagcttctatttaatgtattttactt
cacttgcaagaaaatgaatgacatcacacagcttaatgagtgttcaaatactttcattccagataagtttaacaaacagg
taaaggactgccaaccaaaagagacaaaaaatgatgtattgcatcagtcctcaagctgctacaataataagctcaccagt
aatttccatgacaaggatggtctactcatgacaaatttggtgaacaatgtcaaagaggaaattgtgccaaatgccttgga
atctctatctacagtcaatgctcagagttcaccctccagaaaaacatcttccaagaaaaggtatttgaaaaaaattacaa
aagaatgctgcagacccataaatccaaatagcaatcacatgaaggcagaactctatccatttagtggcagagaaaaactg
acatcaggcagtgaaggcaaacgtggccttcaagaatttctaacttccagtgtctccataaaaacagaaaatcatgaaga
ccccacatgtgatgcagtgtggcacaatgaaagacagcttagtgtaccttttttggataatcaaggtattctgtctaccc
gacctctggtatatttaatgcatccagcagataaatactgcataacagattttgcagaagaattggcagaaacagtggtt
tccatggcaacagaaattgctgccatttgccttgataattcaaatggcaagcagccttggttctgtgcatggaaaagagg
aagtgattatttgatgccccaggctttgccatgtcgacctatgaaaaggaaaaaggaaacccaatccagcggctcaactg
tgagaaaacataggccacctagacttagcgagatcaaaagaaaaactgatgaacaccctgaattaaaagaatggcttatg
aatagagttgtggatgactcaattaaccttgatgacacccttgatttgagcaataactttgcaaatgaagcagctgctaa
aattatgaatttagctgagttttctgtgactgataatgtatggcagaatccaaaccatcctcaaaataggctccattgtg
accgatggaatagagtcaatgcatccagctgtgaaagcattcctgaggaggacttggattctaaagggtctataaatact
ttggctctcataaattctttaggacagccaataagcaggactagttcagtctccaagcagtctagttgtgaaagcattac
agatgagttttcaaggtttatggtcaaccagatggaaactgaaggccgagagtttgatttattacttgactactatgctg
ggaaaaatgcaaataatattataacatctgcactgcaacaagtcaccaaaaagaatggccacctcaatgtaaagccaaat
tgtccatccaaacagtccagcaccgaaagtataactgaagaattttataggtatatgttaaaggaaattgaaaaagaaca
taaagaaaaagtatattctgctacgaatgcaaaggaatggagcagcagcttattacttccttctcaacgatcatcttttt
gtttcagacaatcttcagtccctgacaacagatcctcaacatctaggctaactgtaaatatgcccattaaggcaaattca
ttagatggcttttctcgtagtggccaccgagattccttaaatgtctatccaggcaacacagcatcttcttctggactctg
taaatcagattcttacctgtatcaaagatgtaggactgatcaggtaactgacatgctcattcatgagacctgggcaaact
ccattaaagctctgatgtgcaagaacaaaataattcaagatagtgcggaggttgcacagcctgaccagcatccttatgac
tctccaccacatgttcaacaatatgcacacagacttgctgcaaatattgttgaaagtgggaaaactttaatagccatcca
ccaagattccacaaagaaagatcatgtcacagaaagcaattatattacatcagggatgcaaaacgatcctaaaccatttg
gagacagaaggtatttagatgagaaagaacatcaggccttattccctggattgttttctataaaacacaggagctcttct
tgcctcagagaagtgcctttaatccagatcgaaacagatcaaagacaagaccttgataatgcttcagagcctttaaatgg
agttaatgttacctctgggaaaaaaagagatctactcaaaagaaaacccatagatgctgattcaggacaacagctaattt
cctcaaaaagccatggtttgacagcaggtagttgccctgaatctgaagcctctgtggacaatacagcagtggaagagttt
ccagtccctcttagcagcagtgaagaaagcacatgtagcagctggtgccagctggcaaacaatcctgatgatacaagcag
ctatttgcaactcagcgagagatctatgagcaatggcaacagcagtacctctagcagtcttggcattatggatctggaaa
tttatcaggaaaacataccatcttctcctgcatttaatgatttaacagaaggtgttttctgtgagaaactaccagaaaag
atagaggaatgcacgtctgggttgactgttgaaactactaataaacagaaagatctcttggtgataaacatggacctgga
accagaatatcctgatgcagaattgcgtgctacgcttcaatggattgctgcatctgagcttgggatacccataatctatt
ttaagaaatctcaggaacagagaattgaaaagtttttagatgttgtgcagtttgtacaccagaagtgctggaaagtgggt
gatatctttaatgctgtggtacaattttgcaagatccatgaagaaagtaaagagccgactctgagcctctttgactggct
tcttgaactaggataaaaccttcttaaagattctatttgcatttttaatctgttttaagcggcagtgatctgtgagtggc
tctgttttagtcaaaatctcaacataaatagagctgaaaattataaattctgctgattcatcatgaccctgttccaaagc
agtgcaaagaagggaagtgaggagggagggcagggcagaaagagagaaatgaagagccagtgtaaaatattgctacatta
aggattttgtagttttgaatgcattactcttgaaaagaataggatatgcatttaaattaatgactttttacaaaatctaa
atgaaaaagacattttccatagtctgccagctatgtacggtattaactggaatcacagtaacaaaaaatacaaaaaactt
tgtatttatagttcaaatgcctactgattatacaatgacaaatgagtacatatcagatgtccttaaatgaattctatatt
gttctgctttcaatctattcccaaattagggtctatgctcacactgcattgaaaagcctgaaagtcattccacaagggtg
tccgttctgctgaaagaattaagcccaacaactttttaaatgagttcttaaaactcatgttcagtgagtataatcctgga
cagtcctttagtagaattgagtctcacaggggagttctagacaattgcctgaaatattagcatttcccagttttcttcca
cgtttttaacaatgattcatgtactttataaatctatttacaatctctgaataaataatagaaacatgtactctgagtaa
acttgcagtgggttcagccaggaatttaatacagtcatataattccaaaagtaaaataagttcaattaggtcaacctgga
aaataatggcttttcattatgccttaataggaagattgtactgatgaaatatatttcatactactaacaacagtttattt
ctaacatctttaagttaatgtattgttttactgtaaatatttgaagtatagtacataagatttttcttacggaaaaatgt
acttgtcaacagctggtaccttgctactgagaaaaatagttctcatcctactcaaacattctttataagagctaaagaat
ctgattttaatatataatcaagaaagtaaattagattgcagtaaaaaacatcttcagcttgctaccaatgcaaattgcca
atatccattgctagtagttttcattgtggcgctactatgatattgaacatttctttcataaaagggtacttttcactaca
gaattacattttagaatgtatccaaaaataacattattttgcactattttagaagcaattttaatacagtatatagagcc
ataattaccatcattttccaatcatgcctgccctttcttacatatacagcaaagatattgccagcatttttatcaattta
agtggctttatggaaaataatcattctacagtacatgtagaaaagtaaagaatcccattgttcataggagaactttggac
tagcaccttggtctgctttggaaaagtgccattgcctaaaaagtttatcaataagtgtttgcactcagaaatcaataaaa
taatagatcattagagattgatatattgttggaatatatttatttttgaccaatggcaaattagttgtgaattacacaaa
ttttgcagtggtagaataaatgtttacaagcacaaataatataacaatgtaacaacgtgatgacatttctccctgtatat
tacattttagtactgaagcctgacttgaaataaatttgtgttaacaatatgcctttatctttcttaaatctgattctgaa
tatcccttgtatgtgatacagatgaaataaagcattgttgtacaactatttagtggaggagatacgttttgtatacatca
ttaccatcaagaatattaggtaattgagacttatccctaatataagataaaattgatatataacgatatattctgagctt
atatctatgcagataatatttccctgacttctgatatgtggagattatgcttgcaaatagatacattttagtagcagctt
actagtttcatttattttttgtttttataaacctttgaactttctgaaggttacagaaacaaatgaggtttcactttcca
catctggaaagatgctatgttttaaaagatagaaaatagtggtcctttgctgtattggagatttcatctgacttttttac
ctttcttcattcaaaggaaactatacatagtgtagaaggaagttcagataagccaataacctgatattttcagagaaata
taataaataaaaaccaaagattcacacacatttacaactaagcttcatgccagtatctggatattttggaacacaatgat
gcttagctgacagcagcagttctttaacactattcaaaacagaaatgtacaaaatcatttctaatgactaggaaatgatg
gatcacaaataataacatatcaacaaattctggtttatacaagaattatacaagagccagcatatacaacattgcatgaa
ctttggggcaggcattttttctatactgcctgcttgtatagaaacccagattagtaggagatcatgttaaaaggctctgt
aaaaccaaaatcaagttcttaagaagaaaggcagttcacattaaatgaaaagacatgagggttatgctatttcaacacta
cgactctcacaactgaatgccaaaatcaatgttaatggtttttatttcagaacatggacctccaatgaacatatgaataa
ttaatagaaaattattctcataatgcaaaataaaaaacctttaatattaaagaattacgtagttaatcatatgtgaaata
tgtagtatattcattaactgaattatgcagttcttagtatcattattttctctcattgacatggaataaaacttaataat
tgttagattgta

Protein
Protein IDhabu1_s3002_g10680.t1
Definition-
>habu1_s3002_g10680.t1
MTTAADSSLKVSPSNFECPLMYEISHYGDTDNSVRSSVTACKKVLCSNSLLESTDYWLQNQKTPSRIGIMEDKMDKNCTS
VCFVNLDAGKADYNSEFMKQKLVNISPNLPKFIASMNVQPPKDNEIIFLSGLTSENLQADFEVPQCSWLADVCLLQCARG
NRRKNTSCIIFEINKFLIGLELMQEKQLHVEAGSLKPEDDTNCSVSSIEEDFLTASEHFEDEDDEYKQGDENLHLEAEFK
KYREEDCEDLHCKKAQVPFFLKGSCLSHDSTASTRTSESSEEEYNSEAEDSVLQTVDEAIKQLNWKVGKYNTIGKCKPLS
CADQKDFCKSDNISENVCLTLTTKEDVILSDDLAAGQKSHLDMLNCRVEKTPHPLIQNDQAPTGQFATNLAESVLQDAFI
RLSQSTFTKETALSISVSNPLTSTACATQNEMACRSWNVLPKIVIVQSPDGSDKSEWPGSNFPSLHPWSEVEHCSGADFF
QNNRTQSPLEVALACAATVIGTISSPHAAEKLSEQESMSSAMAVKEKSALSTNSNCNSMEYSFPPALSHMAQMANVVAVH
GLGGKKDIYPVTSSGLLSAAETSAAVTLHCSIAIGSTMENLNNSIAQVLFKEASLVLTRPHAYRTIGEFMESLNGKIVQA
ATKPSTAFLDEVIVDELAQNLSNIILRHSVEEVRKKQRSEENIGACLENTQDVFTATANQLLFNVFYFTCKKMNDITQLN
ECSNTFIPDKFNKQVKDCQPKETKNDVLHQSSSCYNNKLTSNFHDKDGLLMTNLVNNVKEEIVPNALESLSTVNAQSSPS
RKTSSKKRYLKKITKECCRPINPNSNHMKAELYPFSGREKLTSGSEGKRGLQEFLTSSVSIKTENHEDPTCDAVWHNERQ
LSVPFLDNQGILSTRPLVYLMHPADKYCITDFAEELAETVVSMATEIAAICLDNSNGKQPWFCAWKRGSDYLMPQALPCR
PMKRKKETQSSGSTVRKHRPPRLSEIKRKTDEHPELKEWLMNRVVDDSINLDDTLDLSNNFANEAAAKIMNLAEFSVTDN
VWQNPNHPQNRLHCDRWNRVNASSCESIPEEDLDSKGSINTLALINSLGQPISRTSSVSKQSSCESITDEFSRFMVNQME
TEGREFDLLLDYYAGKNANNIITSALQQVTKKNGHLNVKPNCPSKQSSTESITEEFYRYMLKEIEKEHKEKVYSATNAKE
WSSSLLLPSQRSSFCFRQSSVPDNRSSTSRLTVNMPIKANSLDGFSRSGHRDSLNVYPGNTASSSGLCKSDSYLYQRCRT
DQVTDMLIHETWANSIKALMCKNKIIQDSAEVAQPDQHPYDSPPHVQQYAHRLAANIVESGKTLIAIHQDSTKKDHVTES
NYITSGMQNDPKPFGDRRYLDEKEHQALFPGLFSIKHRSSSCLREVPLIQIETDQRQDLDNASEPLNGVNVTSGKKRDLL
KRKPIDADSGQQLISSKSHGLTAGSCPESEASVDNTAVEEFPVPLSSSEESTCSSWCQLANNPDDTSSYLQLSERSMSNG
NSSTSSSLGIMDLEIYQENIPSSPAFNDLTEGVFCEKLPEKIEECTSGLTVETTNKQKDLLVINMDLEPEYPDAELRATL
QWIAASELGIPIIYFKKSQEQRIEKFLDVVQFVHQKCWKVGDIFNAVVQFCKIHEESKEPTLSLFDWLLELG

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Chromosome
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495