Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s3012_g10717
Locus habu1_scaffold3012 : 41870 ... 79675 : -
To GenomeBrowser habu1_scaffold3012:41870..79675
Genes list of scaffold habu1_scaffold3012

Annotation by Blast2GO
Annotation GO
receptor-interacting serine threonine-protein kinase 1 isoform x1 EC:2.7.11.0 GO:0001819 GO:0004674 GO:0005515 GO:0005524 GO:0006355 GO:0009069 GO:0010604 GO:0034612 GO:0043065 GO:0043122 GO:0043234 GO:0043410 GO:0044093 GO:0044444 GO:0046777 GO:0051259 GO:0070266 GO:0071310 GO:0097343 GO:2001237

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s3012_g10717.t3 1 1 Pkinase 16 276 0.0 169.2 0.0 0.0 168.2
habu1_s3012_g10717.t3 1 1 Pkinase_Tyr 17 276 0.0 168.2 0.0 0.0 167.4
habu1_s3012_g10717.t3 1 1 RHIM 520 576 1.1e-07 32.1 1.1e-10 1.1e-07 32.1
habu1_s3012_g10717.t3 1 1 Death 613 658 7.8e-08 31.9 2.4e-10 2.2e-07 30.5
habu1_s3012_g10717.t3 1 1 Abhydrolase_5 661 860 6.8e-16 58.3 1.5e-18 1.4e-15 57.3
habu1_s3012_g10717.t3 1 1 Abhydrolase_6 662 869 1.1e-27 97.4 3.0e-30 2.8e-27 96.0
habu1_s3012_g10717.t3 2 1 Abhydrolase_1 676 751 3.5e-22 79.1 3.8e-15 3.5e-12 46.3
habu1_s3012_g10717.t3 2 2 Abhydrolase_1 816 873 3.5e-22 79.1 3.0e-10 2.8e-07 30.3

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 6.3
Venom grand-1 4.2
Pit, infrared sensing 5.3
Nose 6.4
Brain-1 2.6
Eye 3.1
fetal fibroblast 6.5
venom gland-2 5.9
Brain-2 2.3
Spleen 8.8
Lung 11.0
Liver 9.7
Kidney 8.2
Pancreas 5.4
Small intestine 7.9
Large intestine 10.1
Stomach 9.0
heart 5.0
ovary 14.7
cheek muscle 2.8

Transcript
Transcript IDhabu1_s3012_g10717.t1
Definition-
>habu1_s3012_g10717.t1
gcattaaaaaggttgagaaccactggtttagagattggcttggactccatcgaagttagaacttggtattatattttaaa
cttcagtgtactctttatcagcgtatctgtccttgtagggatggttcagaggagcctctgagccatatttatctatcatg
aaggaattttctggcattggatttttttcctgaattaaagtgctctgtgaaccgcgatcatggccttggctgacatccag
atgaaatcggaggactttttggaaaaaaaccagctgaatgctggcggttttggaacagtctcattatgctaccacaaaaa
ttacgggcttgtagtattaaaaactgtgtatactggacctaaacgcacagaatgtaacacttcccttctagaggaaggca
tgatcatgcataaactaaatcacgatcgggtggtaaaactactgggtgtcatcctggaagatggaaattactcccttgtg
attgaatacatacgcaaaggagacttgatgtctgttctaaaagcaactcctatatttttgcctgtgaaaggacgctttgt
tctggagaccattgaaggaatgctttacctaacagaacaaggtttagtgcacaaggatctgaagccagaaaatattcttg
tggatgaaaattttcacatcaagatagcagaccttggtgtggcttgtttcaaaaactggagcaggctgactaaagaagag
accagtcgacagaggaaaatcaaacagaattccaagagtaacgctggcaccctttcctacatggccccggaacatctgca
ggacatcaacgcaatgcctgtggagaaatcagatgtgtacagttttggcattgttttatgggccatttttgctgccaaag
aaccttatgagaatgctgtcactgatacccaactatgctattgcatcacagcaggcaacagaccacctatcagagaggtg
gaagacagttgtccaaatgagattattactttaatggaacgctcttggcagcaacagccaaatgatcgcccaacctttgc
agaaataaatttgatttacaaaccatattactataaaaactttgaagaggaggtggaagaccatgtaagaaaattaaaag
aaatatatcctgaaccaatcgaacttgtaaaacggatggaatctctccaagtggatgctatgtcagaacctcccagcaga
gctcgatcagatcaacctggttctttgcacagttctcaaggtttcactgctaacaccatagatgaaaacatgttcgcgcc
ctatccagaaaatgaaccggtggaaagctgcgaaaatgcccttgaacctccagcaaccttgcaaagaaaattacaggatg
aactaaattaccatttatacggcagccggatggataggccggaaaatccttctgccgcgtttagtgccgagatgcaggaa
gaggagagtaggaggaggaggagaaaggtatcctacgacccatttgccaaagccgcagccacacctcagacaccagagct
tcacccgagagctcaaaacatcgaagcaagtgttagtcacaacaatatcgttacagctcactcaagtcacccatggcact
caacaccatcaggagcaagagatccaaatgggtttttgggggcaggagctccacttcccagaagggtactaagtgcagaa
gatctctatggagcgccctcagccgcaaactttaatttcaataaaccaccagttccagaatccggcgtgcacagtcaggc
caagccattcagtccgtatcactattcccagagcttaagcacagaaacgggtcctgtggagtcgattccctttaggaaat
tcaactttgcacatcctatgggcggaatacctacagaagaaccgccacattacaacatatataatagtactggaattcaa
ataggctcctacaactatttagaaattaaaaatcaagatattcgagggaacagccctccagcaactactgattactctgc
agaagaacaccagaaaatatttgacagcactgctatagtttcggatatccacctaaaccttgtgagagacaacttgtcca
ggcagtggaaacactgcgctcgtaaactgggcttcaatgaccctgagctggatgaaattgaccacgattatgaacgggat
ggactcaaagagaaagtttaccagatgttccagagtggtcagactgattttgaaccacagctgaagaatatgaacaagga
gatttttaccgttgttgcctgggacccccgaggatatggaaaatctatccctccagttcgagattatcctctagactatt
ttgaaagagatgcaaaagatgctgttgacttgatgcaggcactgaagtttcagaagttctctttgttgggatggagtgat
ggtggaataaccgcactcattgcagctggaaaacatccagatttgatccacaaaatggtggtgtggggagccaatgtgtt
tgttacagaagaggatgtgaaaatttacaatgctatccgagatgtttcaaaatggagtgaaaaagtaagaaagccattgg
aagaaatgtatggacatgaatatttgagcaaaatgtgttcagcttgggtagatggaatctcccagttcacacaaaaatca
gatggaaaagttgcatgtgaaagagagaaggggtctacaacatagttgctttcagaagatcatagtgctatgcctgatga
agttgaatgagctcagtcaagccttttgcatccataaatgatcatagagactgggaatgaataaaaaaatgtctgttttc
aagaggt
Transcript IDhabu1_s3012_g10717.t2
Definition-
>habu1_s3012_g10717.t2
gcattaaaaaggttgagaaccactggtttagagattggcttggactccatcgaagttagaacttggtattatattttaaa
cttcagtgtactctttatcagcgtatctgtccttgtagggatggttcagaggagcctctgagccatatttatctatcatg
aaggaattttctggcattggatttttttcctgaattaaagtgctctgtgaaccgcgatcatggccttggctgacatccag
atgaaatcggaggactttttggaaaaaaaccagctgaatgctggcggttttggaacagtctcattatgctaccacaaaaa
ttacgggcttgtagtattaaaaactgtgtatactggacctaaacgcacagaatgtaacacttcccttctagaggaaggca
tgatcatgcataaactaaatcacgatcgggtggtaaaactactgggtgtcatcctggaagatggaaattactcccttgtg
attgaatacatacgcaaaggagacttgatgtctgttctaaaagcaactcctatatttttgcctgtgaaaggacgctttgt
tctggagaccattgaaggaatgctttacctaacagaacaaggtttagtgcacaaggatctgaagccagaaaatattcttg
tggatgaaaattttcacatcaagatagcagaccttggtgtggcttgtttcaaaaactggagcaggctgactaaagaagag
accagtcgacagaggaaaatcaaacagaattccaagagtaacgctggcaccctttcctacatggccccggaacatctgca
ggacatcaacgcaatgcctgtggagaaatcagatgtgtacagttttggcattgttttatgggccatttttgctgccaaag
aaccttatgagaatgctgtcactgatacccaactatgctattgcatcacagcaggcaacagaccacctatcagagaggtg
gaagacagttgtccaaatgagattattactttaatggaacgctcttggcagcaacagccaaatgatcgcccaacctttgc
agaaataaatttgatttacaaaccatattactataaaaactttgaagaggaggtggaagaccatgtaagaaaattaaaag
aaatatatcctgaaccaatcgaacttgtaaaacggatggaatctctccaagtggatgctatgtcagaacctcccagcaga
gctcgatcagatcaacctggttctttgcacagttctcaaggtttcactgctaacaccatagatgaaaacatgttcgcgcc
ctatccagaaaatgaaccggtggaaagctgcgaaaatgcccttgaacctccagcaaccttgcaaagaaaattacaggatg
aactaaattaccatttatacggcagccggatggataggccggaaaatccttctgccgcgtttagtgccgagatgcaggaa
gaggagagtaggaggaggaggagaaaggtatcctacgacccatttgccaaagccgcagccacacctcagacaccagagct
tcacccgagagctcaaaacatcgaagcaagtgttagtcacaacaatatcgttacagctcactcaagtcacccatggcact
caacaccatcaggagcaagagatccaaatgggtttttgggggcaggagctccacttcccagaagggtactaagtgcagaa
gatctctatggagcgccctcagccgcaaactttaatttcaataaaccaccagttccagaatccggcgtgcacagtcaggc
caagccattcagtccgtatcactattcccagagcttaagcacagaaacgggtcctgtggagtcgattccctttaggaaat
tcaactttgcacatcctatgggcggaatacctacagaagaaccgccacattacaacatatataatagtactggaattcaa
ataggctcctacaactatttagaaattaaaaatcaagatattcgagggaacagccctccagcaactactgattactctgc
agaagaacaccagaaaatatttgacagcactgctatagtttcggatatccacctaaaccttgtgagagacaacttgtcca
ggcagtggaaacactgcgctcgtaaactgggcttcaatgaccctgagctggatgaaattgaccacgattatgaacgggat
ggactcaaagagaaagtttaccagatgttccagagtggtcagactgattttgaaccacagctgaagaatatgaacaagga
gatttttaccgttgttgcctgggacccccgaggatatggaaaatctatccctccagttcgagattatcctctagactatt
ttgaaagagatgcaaaagatgctgttgacttgatgcagctatccgagatgtttcaaaatggagtgaaaaagtaagaaagc
cattggaagaaatgtatggacatgaatatttgagcaaaatgtgttcagcttgggtagatggaatctcccagttcacacaa
aaatcagatggaaaagttgcatgtgaaagagagaaggggtctacaacatagttgctttcagaagatcatagtgctatgcc
tgatgaagttgaatgagctcagtcaagccttttgcatccataaatgatcatagagactgggaatgaataaaaaaatgtct
gttttcaagaggt
Transcript IDhabu1_s3012_g10717.t3
Definition-
>habu1_s3012_g10717.t3
gcattaaaaaggttgagaaccactggtttagagattggcttggactccatcgaagttagaacttggtattatattttaaa
cttcagtgtactctttatcagcgtatctgtccttgtagggatggttcagaggagcctctgagccatatttatctatcatg
aaggaattttctggcattggatttttttcctgaattaaagtgctctgtgaaccgcgatcatggccttggctgacatccag
atgaaatcggaggactttttggaaaaaaaccagctgaatgctggcggttttggaacagtctcattatgctaccacaaaaa
ttacgggcttgtagtattaaaaactgtgtatactggacctaaacgcacagaatgtaacacttcccttctagaggaaggca
tgatcatgcataaactaaatcacgatcgggtggtaaaactactgggtgtcatcctggaagatggaaattactcccttgtg
attgaatacatacgcaaaggagacttgatgtctgttctaaaagcaactcctatatttttgcctgtgaaaggacgctttgt
tctggagaccattgaaggaatgctttacctaacagaacaaggtttagtgcacaaggatctgaagccagaaaatattcttg
tggatgaaaattttcacatcaagatagcagaccttggtgtggcttgtttcaaaaactggagcaggctgactaaagaagag
accagtcgacagaggaaaatcaaacagaattccaagagtaacgctggcaccctttcctacatggccccggaacatctgca
ggacatcaacgcaatgcctgtggagaaatcagatgtgtacagttttggcattgttttatgggccatttttgctgccaaag
aaccttatgagaatgctgtcactgatacccaactatgctattgcatcacagcaggcaacagaccacctatcagagaggtg
gaagacagttgtccaaatgagattattactttaatggaacgctcttggcagcaacagccaaatgatcgcccaacctttgc
agaaataaatttgatttacaaaccatattactataaaaactttgaagaggaggtggaagaccatgtaagaaaattaaaag
aaatatatcctgaaccaatcgaacttgtaaaacggatggaatctctccaagtggatgctatgtcagaacctcccagcaga
gctcgatcagatcaacctggttctttgcacagttctcaaggtttcactgctaacaccatagatgaaaacatgttcgcgcc
ctatccagaaaatgaaccggtggaaagctgcgaaaatgcccttgaacctccagcaaccttgcaaagaaaattacaggatg
aactaaattaccatttatacggcagccggatggataggccggaaaatccttctgccgcgtttagtgccgagatgcaggaa
gaggagagtaggaggaggaggagaaaggtatcctacgacccatttgccaaagccgcagccacacctcagacaccagagct
tcacccgagagctcaaaacatcgaagcaagtgttagtcacaacaatatcgttacagctcactcaagtcacccatggcact
caacaccatcaggagcaagagatccaaatgggtttttgggggcaggagctccacttcccagaagggtactaagtgcagaa
gatctctatggagcgccctcagccgcaaactttaatttcaataaaccaccagttccagaatccggcgtgcacagtcaggc
caagccattcagtccgtatcactattcccagagcttaagcacagaaacgggtcctgtggagtcgattccctttaggaaat
tcaactttgcacatcctatgggcggaatacctacagaagaaccgccacattacaacatatataatagtactggaattcaa
ataggctcctacaactatttagaaattaaaaatcaagatattcgagggaacagccctccagcaactactgattactctgc
agaagaacaccagaaaatatttgacagcactgctatagtttcggatatccacctaaaccttgtgagagacaacttgtcca
ggcagtggaaacactgcgctcgtaaactgggcttcaatgaccctgagctggatgaaattgaccacgattatgaacgggat
ggactcaaagagaaagtttaccagatgttccagagtggtcagactgattttgaaccacagctgaagaatatgaacaagga
gatttttaccgttgttgcctgggacccccgaggatatggaaaatctatccctccagttcgagattatcctctagactatt
ttgaaagagatgcaaaagatgctgttgacttgatgcaggcactgaagtttcagaagttctctttgttgggatggagtgat
ggtggaataaccgcactcattgcagctggaaaacatccagatttgatccacaaaatggtggtgtggggagccaatgtgtt
tgttacagaagaggatgtgaaaatttacaatgctatccgagatgtttcaaaatggagtgaaaaagtaagaaagccattgg
aagaaatgtatggacatgaatatttgagcaaaatgtgttcagcttgggtagatggaatctcccagttcacacaaaaatca
gatggtgatatctgtcagcttctgctaactcatattaaatgcccaacgctaattatacatggtgagaaagatccattggt
accccgttttcatgcagaatatatccacaagcatatcaaaggttcacggttgcattttatgcctgaaggaaaacataatt
tacacctacggtttgcagaagagtttaagaaaatggtagaagaatttcttgtgtaaagcacctacttctttgctgttcct
gagagattggtaaacttcagctgaaactagcaacagtgaattgtactcttaagggaaagaatgcgacaaaggaatgtatt
ttctccaaatggtagcaaaactgatatatgccaaaattctgggacatggaaaaggattaaaaactgctagaagtgggaat
att

Protein
Protein IDhabu1_s3012_g10717.t1
Definition-
>habu1_s3012_g10717.t1
MALADIQMKSEDFLEKNQLNAGGFGTVSLCYHKNYGLVVLKTVYTGPKRTECNTSLLEEGMIMHKLNHDRVVKLLGVILE
DGNYSLVIEYIRKGDLMSVLKATPIFLPVKGRFVLETIEGMLYLTEQGLVHKDLKPENILVDENFHIKIADLGVACFKNW
SRLTKEETSRQRKIKQNSKSNAGTLSYMAPEHLQDINAMPVEKSDVYSFGIVLWAIFAAKEPYENAVTDTQLCYCITAGN
RPPIREVEDSCPNEIITLMERSWQQQPNDRPTFAEINLIYKPYYYKNFEEEVEDHVRKLKEIYPEPIELVKRMESLQVDA
MSEPPSRARSDQPGSLHSSQGFTANTIDENMFAPYPENEPVESCENALEPPATLQRKLQDELNYHLYGSRMDRPENPSAA
FSAEMQEEESRRRRRKVSYDPFAKAAATPQTPELHPRAQNIEASVSHNNIVTAHSSHPWHSTPSGARDPNGFLGAGAPLP
RRVLSAEDLYGAPSAANFNFNKPPVPESGVHSQAKPFSPYHYSQSLSTETGPVESIPFRKFNFAHPMGGIPTEEPPHYNI
YNSTGIQIGSYNYLEIKNQDIRGNSPPATTDYSAEEHQKIFDSTAIVSDIHLNLVRDNLSRQWKHCARKLGFNDPELDEI
DHDYERDGLKEKVYQMFQSGQTDFEPQLKNMNKEIFTVVAWDPRGYGKSIPPVRDYPLDYFERDAKDAVDLMQALKFQKF
SLLGWSDGGITALIAAGKHPDLIHKMVVWGANVFVTEEDVKIYNAIRDVSKWSEKVRKPLEEMYGHEYLSKMCSAWVDGI
SQFTQKSDGKVACEREKGSTT
Protein IDhabu1_s3012_g10717.t2
Definition-
>habu1_s3012_g10717.t2
MALADIQMKSEDFLEKNQLNAGGFGTVSLCYHKNYGLVVLKTVYTGPKRTECNTSLLEEGMIMHKLNHDRVVKLLGVILE
DGNYSLVIEYIRKGDLMSVLKATPIFLPVKGRFVLETIEGMLYLTEQGLVHKDLKPENILVDENFHIKIADLGVACFKNW
SRLTKEETSRQRKIKQNSKSNAGTLSYMAPEHLQDINAMPVEKSDVYSFGIVLWAIFAAKEPYENAVTDTQLCYCITAGN
RPPIREVEDSCPNEIITLMERSWQQQPNDRPTFAEINLIYKPYYYKNFEEEVEDHVRKLKEIYPEPIELVKRMESLQVDA
MSEPPSRARSDQPGSLHSSQGFTANTIDENMFAPYPENEPVESCENALEPPATLQRKLQDELNYHLYGSRMDRPENPSAA
FSAEMQEEESRRRRRKVSYDPFAKAAATPQTPELHPRAQNIEASVSHNNIVTAHSSHPWHSTPSGARDPNGFLGAGAPLP
RRVLSAEDLYGAPSAANFNFNKPPVPESGVHSQAKPFSPYHYSQSLSTETGPVESIPFRKFNFAHPMGGIPTEEPPHYNI
YNSTGIQIGSYNYLEIKNQDIRGNSPPATTDYSAEEHQKIFDSTAIVSDIHLNLVRDNLSRQWKHCARKLGFNDPELDEI
DHDYERDGLKEKVYQMFQSGQTDFEPQLKNMNKEIFTVVAWDPRGYGKSIPPVRDYPLDYFERDAKDAVDLMQLSEMFQN
GVKK
Protein IDhabu1_s3012_g10717.t3
Definition-
>habu1_s3012_g10717.t3
MALADIQMKSEDFLEKNQLNAGGFGTVSLCYHKNYGLVVLKTVYTGPKRTECNTSLLEEGMIMHKLNHDRVVKLLGVILE
DGNYSLVIEYIRKGDLMSVLKATPIFLPVKGRFVLETIEGMLYLTEQGLVHKDLKPENILVDENFHIKIADLGVACFKNW
SRLTKEETSRQRKIKQNSKSNAGTLSYMAPEHLQDINAMPVEKSDVYSFGIVLWAIFAAKEPYENAVTDTQLCYCITAGN
RPPIREVEDSCPNEIITLMERSWQQQPNDRPTFAEINLIYKPYYYKNFEEEVEDHVRKLKEIYPEPIELVKRMESLQVDA
MSEPPSRARSDQPGSLHSSQGFTANTIDENMFAPYPENEPVESCENALEPPATLQRKLQDELNYHLYGSRMDRPENPSAA
FSAEMQEEESRRRRRKVSYDPFAKAAATPQTPELHPRAQNIEASVSHNNIVTAHSSHPWHSTPSGARDPNGFLGAGAPLP
RRVLSAEDLYGAPSAANFNFNKPPVPESGVHSQAKPFSPYHYSQSLSTETGPVESIPFRKFNFAHPMGGIPTEEPPHYNI
YNSTGIQIGSYNYLEIKNQDIRGNSPPATTDYSAEEHQKIFDSTAIVSDIHLNLVRDNLSRQWKHCARKLGFNDPELDEI
DHDYERDGLKEKVYQMFQSGQTDFEPQLKNMNKEIFTVVAWDPRGYGKSIPPVRDYPLDYFERDAKDAVDLMQALKFQKF
SLLGWSDGGITALIAAGKHPDLIHKMVVWGANVFVTEEDVKIYNAIRDVSKWSEKVRKPLEEMYGHEYLSKMCSAWVDGI
SQFTQKSDGDICQLLLTHIKCPTLIIHGEKDPLVPRFHAEYIHKHIKGSRLHFMPEGKHNLHLRFAEEFKKMVEEFLV

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