Gene
| Gene Model ID | habu1_s3012_g10718 |
|---|---|
| Locus | habu1_scaffold3012 : 85551 ... 94635 : - |
| To GenomeBrowser | habu1_scaffold3012:85551..94635 |
| Genes list of scaffold | habu1_scaffold3012 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3012_g10718.t1 | 1 | 1 | Flavodoxin_2 | 4 | 212 | 0.0 | 169.4 | 0.0 | 0.0 | 169.2 |
| habu1_s3012_g10718.t1 | 1 | 1 | FMN_red | 6 | 152 | 1.0e-10 | 41.3 | 5.3e-14 | 2.6e-10 | 39.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3012_g10718.t1 | gi|602634100|ref|XP_007423924.1| | PREDICTED: ribosyldihydronicotinamide dehydrogenase [quinone] isoform X1 [Python bivittatus] | 0.0 |
| habu1_s3012_g10718.t1 | gi|602634102|ref|XP_007423925.1| | PREDICTED: ribosyldihydronicotinamide dehydrogenase [quinone] isoform X2 [Python bivittatus] | 0.0 |
| habu1_s3012_g10718.t1 | gi|564248873|ref|XP_006263519.1| | PREDICTED: ribosyldihydronicotinamide dehydrogenase [quinone] [Alligator mississippiensis] | 0.0 |
| habu1_s3012_g10718.t1 | gi|557278408|ref|XP_006022266.1| | PREDICTED: ribosyldihydronicotinamide dehydrogenase [quinone] isoform X1 [Alligator sinensis] | 0.0 |
| habu1_s3012_g10718.t1 | gi|557278410|ref|XP_006022267.1| | PREDICTED: ribosyldihydronicotinamide dehydrogenase [quinone] isoform X2 [Alligator sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.3 |
| Venom grand-1 | 10.9 |
| Pit, infrared sensing | 8.1 |
| Nose | 12.6 |
| Brain-1 | 3.5 |
| Eye | 16.0 |
| fetal fibroblast | 12.6 |
| venom gland-2 | 16.7 |
| Brain-2 | 8.6 |
| Spleen | 9.1 |
| Lung | 6.8 |
| Liver | 5.1 |
| Kidney | 12.9 |
| Pancreas | 9.9 |
| Small intestine | 4.0 |
| Large intestine | 13.4 |
| Stomach | 10.6 |
| heart | 15.2 |
| ovary | 114.2 |
| cheek muscle | 35.5 |
Transcript
| Transcript ID | habu1_s3012_g10718.t1 |
|---|---|
| Definition | - |
>habu1_s3012_g10718.t1 gcttaggtgatctgagcctatcctttccgcccggttactgtgctgttttcaggtggtggatcctagggtactccagagat ctcaagaaactgaatctactttgctttgctttgggacttggataggaatgagagagagggagttaaaagccgcttccttt tctactgccaagagctattaagctaggatatttttgctgatgctcttgtgcttaagtgtgtgtatctattgtttttttct gtggttctcatcattcatcaagatgagcagcttcaagtaatatttgttttgaaaaccaaggagaggaatttagtatctat ctttctttttgtaaccgtcttgacaagaatctttcaaaaccgcattttctcaactgacaaacttgcagggtgttgaaaaa atggcagggaaagaagtattgattgtctatgcacaccaagagctcaaatctctgaatggttcgtttaaaaccttgacagt ggaagaactgaagaagcaaggctgtacagtcactgtttcagacttgtatgaaatgcaatttgagccaagaacaactagga aagatatagttggtgaattatacaatcctgatcattttaattatggaattgaggcctggaaagcttatgaaaatggatgt ctgactgaagatttgattgaggagcaaaagaaagtcaacaaagccgacttggtgattttccagtttcctttatattggtt cagcatgccagccatcctgaagggctggatggacagagtcttagtccaaggatttgctcatgatttcccaaagtgttatg attctggtttactcaagaataaattagctttactttcatttaccactggaggagacgaagaaatgtattcaaggagagga cccagtgataatatccgttaccttctctggcccatgcagcatggaatcttacacttctgtggcttcagtatcctttcccc tcagatctgctttgcccctgagtatgtgacggaagagaaaagacaacagatgttgacttcatggctcaaacggctacaga ccatttgggaggagaaacctattaattgtgtgccggaatggtactttggggacatttgaaaatggagcagggagatgaat acgaaaagatgaaaatattttctgaaactctgacccacagatatttgtttctgtaatttccctatccatcttgggctgta cagagccagttaattaaattaaattgaattggagactgagtatct |
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Protein
| Protein ID | habu1_s3012_g10718.t1 |
|---|---|
| Definition | - |
>habu1_s3012_g10718.t1 MAGKEVLIVYAHQELKSLNGSFKTLTVEELKKQGCTVTVSDLYEMQFEPRTTRKDIVGELYNPDHFNYGIEAWKAYENGC LTEDLIEEQKKVNKADLVIFQFPLYWFSMPAILKGWMDRVLVQGFAHDFPKCYDSGLLKNKLALLSFTTGGDEEMYSRRG PSDNIRYLLWPMQHGILHFCGFSILSPQICFAPEYVTEEKRQQMLTSWLKRLQTIWEEKPINCVPEWYFGDI |
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