Gene
| Gene Model ID | habu1_s3061_g10815 |
|---|---|
| Locus | habu1_scaffold3061 : 185246 ... 231000 : + |
| To GenomeBrowser | habu1_scaffold3061:185246..231000 |
| Genes list of scaffold | habu1_scaffold3061 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| glutamate decarboxylase 2 | EC:4.1.1.15 GO:0000139 GO:0004351 GO:0005829 GO:0006522 GO:0006531 GO:0006540 GO:0007268 GO:0007269 GO:0016595 GO:0019482 GO:0019530 GO:0030054 GO:0030170 GO:0030424 GO:0030672 GO:0031225 GO:0042136 GO:0042493 GO:0042734 GO:0046982 GO:0048471 GO:0061202 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3061_g10815.t2 | 2 | 1 | Pyridoxal_deC | 52 | 258 | 0.0 | 276.7 | 0.0 | 0.0 | 174.0 |
| habu1_s3061_g10815.t2 | 2 | 2 | Pyridoxal_deC | 261 | 354 | 0.0 | 276.7 | 1.9e-31 | 9.5e-28 | 96.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3061_g10815.t2 | gi|694852007|ref|XP_009467342.1| | PREDICTED: glutamate decarboxylase 2 [Nipponia nippon] | 0.0 |
| habu1_s3061_g10815.t2 | gi|529428381|ref|XP_005234011.1| | PREDICTED: glutamate decarboxylase 2 [Falco peregrinus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 36.2 |
| Eye | 3.9 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 27.7 |
| Spleen | 0.2 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.3 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s3061_g10815.t1 |
|---|---|
| Definition | - |
>habu1_s3061_g10815.t1 ggggagacactgagaaatgtagaaattttgaacccgactgttaaatttggaagagcttgccaagaagaatatttatggga catgaatcattctggctcaataaatccatttgaaaacaaactaccgtatattgctggatgacaacatatatacaactaat aaatggccttctttgacatcacatagaagctggtccgaataatatcttctacctgcttcggacggggaagcgatcacctt gactttcctacaagatgtgatggatattttgcttcagtacctggtgaagaattttgaccgatccactaaagtgattgatt tccactacccaaacgagctgcttcaggcgtataactgggaattggcggatcagccccaaaccttggaggaaattctattg aactgcaggacagcgctgaaatacgccatcaaaacagtcaataagatgcagacattgctatgttctaggttcacctatga aattgctcctgtgtttgtgctgttggaatatgtcacattaagaaaaatgagagaaataattggttggccaggaggtgctg gtgatggaatcttttcacctggtggtgccatatctaacatgtatgctatgttgattgcacgtttcaagatgttcccagaa gtcaaagagaaaggaatggcagctattccaaggctggttgccttcacctcagaacatagtcatttttcagtgaagaaagg ggcagctgccttaggaattggtactgacagtgtgattttgatcagatgtgatgaaaggggaaaaatgattccatctgatc ttgaaaggcgaattgttgaggcaaagcaaaagggatttgttccttttctagtaagtgccactgcaggaactacggtatac ggagcttttgatccgcttatagctattgctgatatttgcaagaagtataagatatggatgcatgtggatgggctgatgca aagctgcaatcaaatgcatgcttcttacctcttccaacaagataagcattatgatctctcttatgatactggagacaaag cattgcaatgtggacgccatgttgatgtctttaaactatggctgatgtggcgagcaaagggcaccgtaggattcgaggca catattgataaatgcttggatcttgcagaatatctatataacaaaattaagaacagagaaggctatgaaatggtgtttga tggaaagcctcaacacacaaatgtttgcttctggtacctgcctcccagtttacggaatacagaagataatgaagaaagaa tgaaccgtctttcaaaggtggcaccaataattaaagctcgaatgatggaatatggaaccacgatggtcagctatcagccc ctgggagacaaggtcaattttttccgcatggttatctccaatccagcagcagctcaccaagacattgattttctgattga agaaatagaacgccttgggcaagatttataatcctataatctgccagatccttctgaagtacctctaggtagacaattaa gttgtcacaaactgtggtgaatgtatttgtagtttgttccaaagtgattctctttctatattgtggcgtcaaagtagagt acaatttaaaatcaagaacattgctccttttaaaagttgtcttctcccctctgagtttgcaaaaacttgttttccaggaa gatagtatacaaaaggctgcatttttgcatatcaagcatacatatatatgtattcacaatctcatccctaagatctgtgt gattagtaaaaataattccttttgttaaaaatagccaatagaacaatggtttccaaatggccacagattgtggggcagca taaaaacaaaatgcaaaaatgcatattaaaactgaataacttttatcttttt |
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| Transcript ID | habu1_s3061_g10815.t2 |
| Definition | - |
>habu1_s3061_g10815.t2 aagcacggatgtttgcccaagtggcgcgcccagatcttcgtgatttgaactgtacaaaaaacaaagcgtttagatatgtt aaggacctgcagattattacaggatcttctacctgcttcggacggggaagcgatcaccttgactttcctacaagatgtga tggatattttgcttcagtacctggtgaagaattttgaccgatccactaaagtgattgatttccactacccaaacgagctg cttcaggcgtataactgggaattggcggatcagccccaaaccttggaggaaattctattgaactgcaggacagcgctgaa atacgccatcaaaacagtcaataagatgcagacattgctatgttctaggttcacctatgaaattgctcctgtgtttgtgc tgttggaatatgtcacattaagaaaaatgagagaaataattggttggccaggaggtgctggtgatggaatcttttcacct ggtggtgccatatctaacatgtatgctatgttgattgcacgtttcaagatgttcccagaagtcaaagagaaaggaatggc agctattccaaggctggttgccttcacctcagaacatagtcatttttcagtgaagaaaggggcagctgccttaggaattg gtactgacagtgtgattttgatcagatgtgatgaaaggggaaaaatgattccatctgatcttgaaaggcgaattgttgag gcaaagcaaaagggatttgttccttttctagtaagtgccactgcaggaactacggtatacggagcttttgatccgcttat agctattgctgatatttgcaagaagtataagatatggatgcatgtggatgggctgatgcaaagctgcaatcaaatgcatg cttcttacctcttccaacaagataagcattatgatctctcttatgatactggagacaaagcattgcaatgtggacgccat gttgatgtctttaaactatggctgatgtggcgagcaaagggcaccgtaggattcgaggcacatattgataaatgcttgga tcttgcagaatatctatataacaaaattaagaacagagaaggctatgaaatggtgtttgatggaaagcctcaacacacaa atgtttgcttctggtacctgcctcccagtttacggaatacagaagataatgaagaaagaatgaaccgtctttcaaaggtg gcaccaataattaaagctcgaatgatggaatatggaaccacgatggtcagctatcagcccctgggagacaaggtcaattt tttccgcatggttatctccaatccagcagcagctcaccaagacattgattttctgattgaagaaatagaacgccttgggc aagatttataatcctataatctgccagatccttctgaagtacctctaggtagacaattaagttgtcacaaactgtggtga atgtatttgtagtttgttccaaagtgattctctttctatattgtggcgtcaaagtagagtacaatttaaaatcaagaaca ttgctccttttaaaagttgtcttctcccctctgagtttgcaaaaacttgttttccaggaagatagtatacaaaaggctgc atttttgcatatcaagcatacatatatatgtattcacaatctcatccctaagatctgtgtgattagtaaaaataattcct tttgttaaaaatagccaatagaacaatggtttccaaatggccacagattgtggggcagcataaaaacaaaatgcaaaaat gcatattaaaactgaataacttttatcttttt |
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Protein
| Protein ID | habu1_s3061_g10815.t1 |
|---|---|
| Definition | - |
>habu1_s3061_g10815.t1 MDILLQYLVKNFDRSTKVIDFHYPNELLQAYNWELADQPQTLEEILLNCRTALKYAIKTVNKMQTLLCSRFTYEIAPVFV LLEYVTLRKMREIIGWPGGAGDGIFSPGGAISNMYAMLIARFKMFPEVKEKGMAAIPRLVAFTSEHSHFSVKKGAAALGI GTDSVILIRCDERGKMIPSDLERRIVEAKQKGFVPFLVSATAGTTVYGAFDPLIAIADICKKYKIWMHVDGLMQSCNQMH ASYLFQQDKHYDLSYDTGDKALQCGRHVDVFKLWLMWRAKGTVGFEAHIDKCLDLAEYLYNKIKNREGYEMVFDGKPQHT NVCFWYLPPSLRNTEDNEERMNRLSKVAPIIKARMMEYGTTMVSYQPLGDKVNFFRMVISNPAAAHQDIDFLIEEIERLG QDL |
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| Protein ID | habu1_s3061_g10815.t2 |
| Definition | - |
>habu1_s3061_g10815.t2 MLRTCRLLQDLLPASDGEAITLTFLQDVMDILLQYLVKNFDRSTKVIDFHYPNELLQAYNWELADQPQTLEEILLNCRTA LKYAIKTVNKMQTLLCSRFTYEIAPVFVLLEYVTLRKMREIIGWPGGAGDGIFSPGGAISNMYAMLIARFKMFPEVKEKG MAAIPRLVAFTSEHSHFSVKKGAAALGIGTDSVILIRCDERGKMIPSDLERRIVEAKQKGFVPFLVSATAGTTVYGAFDP LIAIADICKKYKIWMHVDGLMQSCNQMHASYLFQQDKHYDLSYDTGDKALQCGRHVDVFKLWLMWRAKGTVGFEAHIDKC LDLAEYLYNKIKNREGYEMVFDGKPQHTNVCFWYLPPSLRNTEDNEERMNRLSKVAPIIKARMMEYGTTMVSYQPLGDKV NFFRMVISNPAAAHQDIDFLIEEIERLGQDL |
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