Gene
| Gene Model ID | habu1_s3061_g10816 |
|---|---|
| Locus | habu1_scaffold3061 : 238258 ... 258905 : - |
| To GenomeBrowser | habu1_scaffold3061:238258..258905 |
| Genes list of scaffold | habu1_scaffold3061 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| uncharacterized protein loc103279099 | GO:0005509 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3061_g10816.t1 | 2 | 1 | TNFR_c6 | 382 | 421 | 4.3e-08 | 33.0 | 1.2e-07 | 0.00087 | 19.2 |
| habu1_s3061_g10816.t1 | 2 | 2 | TNFR_c6 | 462 | 498 | 4.3e-08 | 33.0 | 2.4e-07 | 0.0018 | 18.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3061_g10816.t1 | gi|637309796|ref|XP_008110602.1| | PREDICTED: uncharacterized protein LOC103279099 [Anolis carolinensis] | 0.0 |
| habu1_s3061_g10816.t1 | gi|612055579|ref|XP_007504908.1| | PREDICTED: uncharacterized protein LOC103093635 [Monodelphis domestica] | 0.0 |
| habu1_s3061_g10816.t1 | gi|301607166|ref|XP_002933188.1| | PREDICTED: uncharacterized protein LOC100495411 [Xenopus (Silurana) tropicalis] | 0.0 |
| habu1_s3061_g10816.t1 | gi|513167963|ref|XP_004939275.1| | PREDICTED: uncharacterized protein LOC101748058 isoform X1 [Gallus gallus] | 0.0 |
| habu1_s3061_g10816.t1 | gi|513167966|ref|XP_004939276.1| | PREDICTED: uncharacterized protein LOC101748058 isoform X2 [Gallus gallus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.4 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.3 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.3 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s3061_g10816.t1 |
|---|---|
| Definition | - |
>habu1_s3061_g10816.t1 gttccgccatttgccgagcgtgcggaaagaaaggccacatcgctgcagtttgcctgggtcgacagaaggggtttctacaa gccaacatgatccgccacgctgcttcggctcctttccatcctttcaccaacggtctggctgaacggatggtccgcgtcgc caaggacgccctcaagaaactgacttacggcaattggcatcacaggttggctgactttcttctagcccatcgtactactc ctgccacgggtaagccgctcagatgtgagatgcagttgaagcagtcagtttggacttgttgctgttggcttggaatctgc ctgtggctcctagctggagaaggaagatgtgtctatgcaaaactctgcagaattcccccatgtggcaggaataccaatgg tggattaccgtccagcagacagcagtgccaaggtgctcactgcttcagcaggtcaaatcactcgtctcatactttcgttc agtctactataactggccaagatcagccacccagcacgcaacaaccacagcaatcttctataggaagcatcttagggctc ttagccatgaccagcagaggtacacaggcattatgctctggaggaagggactgtatcagcagaaatctcaatagcaccat gcaggactgcagaggcattgattgtcggctacccttgtacattcgccagaagcctagacctgctagccaaatcttcccct gccgcccaaatcaagaggaaggctgccttgagcctaccatggtcagaacaactgagaaagcagcacaattcattggggaa gagcttgcctacacagcttcagaacttggtggagctgctctgggtgttcaactcatctgtgatgttaaaccaggagataa tgaagttccatctgaggatgcacttgtactccagctacaacttacaaaaggccaagaaaagtttgttgaaacactaaaaa gtcagcaggcggtcattgtggatttacagcaaaaacttgcagagcagcaggatgcattggttacccaacagcgggaaatt attatgcaacaaagaaaaatgtatgaacaaatggatctgatcaaagttcagtatggtatgctttttgacacagtgaagca aatgtcatttaaggatttgcaagaggacatccagcattactttgcggctaatcttcaaagcttgcaaaaggaagtcagaa atcatctccagaagtcctactctgggcacaaactaaacatggatgcaaaaatgattgatattggagaacctttgatggaa tgtggtctttgtgaaagtgatgaattttgcaattttcagaaggcaccatcacagtgtgaaaaatgcaccttgtgccctgc tggcttttttcagctattggaatgttctgcaaatgcagatcgaatatgtcaggatagaaatgaatgcatcgaatcaccaa gtatctgtggagaaaggataaaatgcctgaacacaccaggaggattccgctgtcttggaatggcagaaagagaggctgtt ctgggactatgtggagaagaatatttctttaataaagaactgcaggaatgccaggcctgcctcatgtgtgatgatggaga agtggttttaccttgttcccttgtgactgatacagtttgttcaacagccagtgaaaccattctgtctgagatgtgggctg cggacatagctttacccttggcaaaatctgcctcatcccagatctaccctgggtttaacctgaagttaaaggaaaaacaa ggatgcaatatgggaaatcttgaaaaggacagcttggtgttcaaagaccatggtttaatgtgggctgatttcaactttgc cgtgaaacataactgcagaaatttcctccacctttccttaaagttcaaggacaatgaggaagactatgaactaagtggag tgcgtattgaacaaccagaaggcaaagtttttcagagtgccagtgtcttagccagggtggatcctacatgttaaatgtta aatttaattgaccatttttccctcttttctttgcacactatttttttcttttttattgttgttagggttgaatgtatgct tttgttttgcttcatttagtttgtttgttttactgatttgtattttattttctatgataaaacaataaataataattaaa acaaaaaagaa |
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Protein
| Protein ID | habu1_s3061_g10816.t1 |
|---|---|
| Definition | - |
>habu1_s3061_g10816.t1 MVRVAKDALKKLTYGNWHHRLADFLLAHRTTPATGKPLRCEMQLKQSVWTCCCWLGICLWLLAGEGRCVYAKLCRIPPCG RNTNGGLPSSRQQCQGAHCFSRSNHSSHTFVQSTITGQDQPPSTQQPQQSSIGSILGLLAMTSRGTQALCSGGRDCISRN LNSTMQDCRGIDCRLPLYIRQKPRPASQIFPCRPNQEEGCLEPTMVRTTEKAAQFIGEELAYTASELGGAALGVQLICDV KPGDNEVPSEDALVLQLQLTKGQEKFVETLKSQQAVIVDLQQKLAEQQDALVTQQREIIMQQRKMYEQMDLIKVQYGMLF DTVKQMSFKDLQEDIQHYFAANLQSLQKEVRNHLQKSYSGHKLNMDAKMIDIGEPLMECGLCESDEFCNFQKAPSQCEKC TLCPAGFFQLLECSANADRICQDRNECIESPSICGERIKCLNTPGGFRCLGMAEREAVLGLCGEEYFFNKELQECQACLM CDDGEVVLPCSLVTDTVCSTASETILSEMWAADIALPLAKSASSQIYPGFNLKLKEKQGCNMGNLEKDSLVFKDHGLMWA DFNFAVKHNCRNFLHLSLKFKDNEEDYELSGVRIEQPEGKVFQSASVLARVDPTC |
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