Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s309_g01449
Locus habu1_scaffold309 : 38274 ... 62395 : -
To GenomeBrowser habu1_scaffold309:38274..62395
Genes list of scaffold habu1_scaffold309

Annotation by Blast2GO
Annotation GO
axin dorsalization-associated protein isoform x2 GO:0005737 GO:0019904 GO:0043496 GO:0043508

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s309_g01449.t1 1 1 Aida_N 9 113 2.8026e-45 152.5 0.0 5.60519e-45 151.7
habu1_s309_g01449.t1 1 1 Aida_C2 159 305 0.0 222.1 0.0 0.0 221.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s309_g01449.t1 gi|602656063|ref|XP_007433769.1| PREDICTED: axin interactor, dorsalization-associated protein isoform X1 [Python bivittatus] 0.0
habu1_s309_g01449.t1 gi|602656065|ref|XP_007433770.1| PREDICTED: axin interactor, dorsalization-associated protein isoform X2 [Python bivittatus] 0.0
habu1_s309_g01449.t1 gi|683931050|ref|XP_009095276.1| PREDICTED: axin interactor, dorsalization-associated protein [Serinus canaria] 0.0
habu1_s309_g01449.t1 gi|350589276|ref|XP_003130561.3| PREDICTED: axin interactor, dorsalization-associated protein [Sus scrofa] 0.0
habu1_s309_g01449.t1 gi|729758225|ref|XP_010575976.1| PREDICTED: axin interactor, dorsalization-associated protein isoform X1 [Haliaeetus leucocephalus] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 31.4
Venom grand-1 97.0
Pit, infrared sensing 29.1
Nose 30.1
Brain-1 10.5
Eye 41.5
fetal fibroblast 65.7
venom gland-2 204.2
Brain-2 12.1
Spleen 218.8
Lung 38.1
Liver 71.6
Kidney 37.2
Pancreas 758.0
Small intestine 56.0
Large intestine 47.3
Stomach 85.7
heart 38.3
ovary 3.3
cheek muscle 90.9

Transcript
Transcript IDhabu1_s309_g01449.t1
Definition-
>habu1_s309_g01449.t1
gcgaccgcggatgaagatggagccctagcagctgggaccatgtcggaagcgactcggagccttctgcagcgctggggcgc
cagcttcagaaaagggaccgacttcgactcttgggggcagctggtggaagcgatcgacgagtatcagatattagcaagac
atctacagaaagaggcacaatctcagcccaacaattcagaattctcagaagatcaaaagaaaattttagccaagattgca
acatgcttggaactcaggagtgcagctttgcagtctacccagtcccaggaagaatttaagctggaagatctgaagaaact
agaaccaatcttaaagagtattcttacctataataaagaatttccttttgatgttcagcctgttccaccaaggaaaatct
tagcacctggtgaagaggaagatttagaatttgaagaagatgaggaggaaggtggagctggagcaggatctccagatgca
tttcctgccagagtcccaggagccaatgaaggtactttattacccagattaccatctgagcccgggatgacattactaac
tatcaaaatagaaaaaattggtcttaaagatgctgggcagtgcattgatccctatatcacagttagtgtgaaagatctca
atgggatagatcttacacctgtgcaagacacccctgttgcttcaagaaaggaggacacttacattcattttaatgtggac
attgaaattcagaaacatgttgaaaaattaacaaaaggtgcagctattttctttgaatttaaacactataaacccaagaa
aaggttcaccagcacaaagtgctttgcctttatggagatggatgaaattaaagctggatcaattgttatagaactgtaca
aaaaacccactgattttaagaggaagaaacttcagttgttgaccaagaagccactttatcttcaccttcatcaaacactg
cacaaagagtgacttttgtgaactgaaccacttgccataaattcatagtagctgcatatgtagcacttgtctttcaggag
gaaggaagaatggatgcatttaccttgtggtcacaaatgaccatcagtgctgcacagcagtggatcaagtagccactctc
tgcatccaagcccagtttctttggaatgtatatttttaattcagatgttccaaagtgtgttgcaagtttttcataaatgg
gccggttattaagttcagttctgtaacttgatttctattgttatatcagaacccttaattaaagcagttgaggaatcccc
gtctgccaaacctgatacagcaataaagatatgccagtatcaaaaaaac

Protein
Protein IDhabu1_s309_g01449.t1
Definition-
>habu1_s309_g01449.t1
MSEATRSLLQRWGASFRKGTDFDSWGQLVEAIDEYQILARHLQKEAQSQPNNSEFSEDQKKILAKIATCLELRSAALQST
QSQEEFKLEDLKKLEPILKSILTYNKEFPFDVQPVPPRKILAPGEEEDLEFEEDEEEGGAGAGSPDAFPARVPGANEGTL
LPRLPSEPGMTLLTIKIEKIGLKDAGQCIDPYITVSVKDLNGIDLTPVQDTPVASRKEDTYIHFNVDIEIQKHVEKLTKG
AAIFFEFKHYKPKKRFTSTKCFAFMEMDEIKAGSIVIELYKKPTDFKRKKLQLLTKKPLYLHLHQTLHKE

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