Gene
| Gene Model ID | habu1_s309_g01451 |
|---|---|
| Locus | habu1_scaffold309 : 88036 ... 98658 : + |
| To GenomeBrowser | habu1_scaffold309:88036..98658 |
| Genes list of scaffold | habu1_scaffold309 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s309_g01451.t1 | 1 | 1 | FAM177 | 21 | 127 | 8.8e-32 | 109.6 | 5.9e-36 | 8.8e-32 | 109.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s309_g01451.t1 | gi|602656077|ref|XP_007433776.1| | PREDICTED: protein FAM177B [Python bivittatus] | 0.0 |
| habu1_s309_g01451.t1 | gi|637257628|ref|XP_008124081.1| | PREDICTED: protein FAM177B [Anolis carolinensis] | 0.0 |
| habu1_s309_g01451.t1 | gi|530592049|ref|XP_005289663.1| | PREDICTED: protein FAM177B [Chrysemys picta bellii] | 0.0 |
| habu1_s309_g01451.t1 | gi|591352123|ref|XP_007070509.1| | PREDICTED: protein FAM177B [Chelonia mydas] | 8.40779e-45 |
| habu1_s309_g01451.t1 | gi|558127915|ref|XP_006115658.1| | PREDICTED: protein FAM177B [Pelodiscus sinensis] | 7.0e-38 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.8 |
| Venom grand-1 | 0.5 |
| Pit, infrared sensing | 1.0 |
| Nose | 3.5 |
| Brain-1 | 0.0 |
| Eye | 0.2 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.2 |
| Brain-2 | 0.1 |
| Spleen | 0.0 |
| Lung | 0.2 |
| Liver | 0.0 |
| Kidney | 0.9 |
| Pancreas | 0.3 |
| Small intestine | 1.6 |
| Large intestine | 24.5 |
| Stomach | 24.2 |
| heart | 0.1 |
| ovary | 0.2 |
| cheek muscle | 2.2 |
Transcript
| Transcript ID | habu1_s309_g01451.t1 |
|---|---|
| Definition | - |
>habu1_s309_g01451.t1 acccctgttctaactgatgccttaaccactatatcaaactggctctctagccactgttattgaaatgaatacaattcttg gtatagttcaaaaccttattagattcaaaggagctggtctagatggaggtcatataagatattatttccatgatggacaa taccccaaaaactctaaaggaggaagtgaatgacagaaaggaactgggagataatactctaaaggaaaataaatctcctg gaaagatcatttattttgcaaatggtgaaacaatggaagaatgcagttcagaagaagaagatgttgaggaatgcaatcag aagccattacttgacactgccaatctctcttggggtaattacctacgaagttgggtacatcaaattgtagccacagcatt ttttgcttgtgaatttcttggtgggaaatttgtcacattccttggactcaatgactctaaatatcagtatgcagtggatg aatactacaggacacaaaataagaaaaatgaaagtgatgaagatggtgaggagatgtcagaaatgaaggagacaaccaca tcaaatgaaaagtaccacctagaaatgaagcagctaagatatgggtctattaattgcaacaacattccattccttcctca gaaagacactgttgcaaatgtaaatgaacttgaagaaagtgggctgcaaaatctaaaataaatcaaaattacgggatata aaatgtgcattgttacttttggctggatcaaaatatctaatcctcaggtacatatattgagaggttaaatcagttctctt ggtggattatttgactgtatggattaaaatggactgttttacaccacactaccgtatatatcaacattactactgttatt gtttctggattgtacttggttaaattttgttttgggttttactactcagagttatgttatgggctgagtagaaatataaa ttgtttaaataaagaatcaatatataaaccaatct |
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Protein
| Protein ID | habu1_s309_g01451.t1 |
|---|---|
| Definition | - |
>habu1_s309_g01451.t1 MMDNTPKTLKEEVNDRKELGDNTLKENKSPGKIIYFANGETMEECSSEEEDVEECNQKPLLDTANLSWGNYLRSWVHQIV ATAFFACEFLGGKFVTFLGLNDSKYQYAVDEYYRTQNKKNESDEDGEEMSEMKETTTSNEKYHLEMKQLRYGSINCNNIP FLPQKDTVANVNELEESGLQNLK |
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