Gene
| Gene Model ID | habu1_s309_g01456 |
|---|---|
| Locus | habu1_scaffold309 : 246454 ... 320785 : - |
| To GenomeBrowser | habu1_scaffold309:246454..320785 |
| Genes list of scaffold | habu1_scaffold309 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s309_g01456.t1 | 4 | 1 | Sushi | 76 | 136 | 8.0e-35 | 118.9 | 5.2e-11 | 2.6e-07 | 30.8 |
| habu1_s309_g01456.t1 | 4 | 2 | Sushi | 143 | 198 | 8.0e-35 | 118.9 | 7.5e-12 | 3.7e-08 | 33.5 |
| habu1_s309_g01456.t1 | 4 | 3 | Sushi | 201 | 258 | 8.0e-35 | 118.9 | 1.9e-11 | 9.2e-08 | 32.3 |
| habu1_s309_g01456.t1 | 4 | 4 | Sushi | 264 | 318 | 8.0e-35 | 118.9 | 3.5e-11 | 1.7e-07 | 31.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s309_g01456.t1 | gi|602657509|ref|XP_007434472.1| | PREDICTED: sushi domain-containing protein 4, partial [Python bivittatus] | 0.0 |
| habu1_s309_g01456.t1 | gi|530592041|ref|XP_005289659.1| | PREDICTED: sushi domain-containing protein 4 isoform X4 [Chrysemys picta bellii] | 0.0 |
| habu1_s309_g01456.t1 | gi|530592043|ref|XP_005289660.1| | PREDICTED: sushi domain-containing protein 4 isoform X5 [Chrysemys picta bellii] | 0.0 |
| habu1_s309_g01456.t1 | gi|530592037|ref|XP_005289657.1| | PREDICTED: sushi domain-containing protein 4 isoform X1 [Chrysemys picta bellii] | 0.0 |
| habu1_s309_g01456.t1 | gi|641753081|ref|XP_008173449.1| | PREDICTED: sushi domain-containing protein 4 isoform X2 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.5 |
| Venom grand-1 | 1.7 |
| Pit, infrared sensing | 0.8 |
| Nose | 2.6 |
| Brain-1 | 5.6 |
| Eye | 2.4 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 3.0 |
| Brain-2 | 7.9 |
| Spleen | 0.9 |
| Lung | 1.9 |
| Liver | 2.1 |
| Kidney | 58.3 |
| Pancreas | 1.6 |
| Small intestine | 0.3 |
| Large intestine | 0.6 |
| Stomach | 1.2 |
| heart | 0.5 |
| ovary | 2.7 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s309_g01456.t1 |
|---|---|
| Definition | - |
>habu1_s309_g01456.t1 agtcgaggactaaaccggtcgtaagtcaaggactacccaaccggtcaccgtttcaatccggatgcccttttgcggatgaa agatgtatcatggaatgaacccgaacagcggggatccgttcctagagcagccgctgccgccgcctccaccgctgtttcag cgatgccagtctaaactctccctggtggtcttgtggctccaattggcgctgtgctttggccctgcacagatcacaggcga aaacatggaggatacaagatttgatacagttgcagtatgcatatacggttttgatgaactccatgcttgttctgatcctg gattccctgaatatggatataaaatgcccagcacaggtgttttctttgaaagttcagttgtccggtttcattgccaagaa ggatacaggcttaagggtccatcccaaaagctttgtgagagacattttaatggctccctaagctggaagccaagtgataa acctgtgtgcctacaagaagctacagattgccttgctccaactgttgaagatgcagagattcagatcaagacatacacaa ctggagataaattaataatcagctgtcatgaaggattccagatccatttctctgatttagacaacttggtgtcagtatgt caagatgatggaacatgggataatctgcccatttgccaaggttgcctgagaccacttctgcttcctcatagtttcactaa tatatctcagttcgagtcttccttccccgtaggatcaatgatatattttcagtgttttcctggatataaactagaaggtg cagagttccttgagtgcatgtataatcttatctggtcagatagtccacctaggtgccttgatgtggaagtttgtccgcta cctcctatggtgactcatggagattatatctgccatccgcggccttgtgaacactacaaccatggaactgtagttgagtt ctattgtgatcctggctacactctcagtaatgattacaaatatatcacctgccagtatggaaaatggtttccatcatatc aagtatactgtgtcaaaacagaacaagcctggccaaataaccaggaaactcttttgcgaacatggaagattgtggcattc actgctactagtgttcttctaatgcttctgttagttattcttgccagaatgttccaaaccaaatttaaggcacatttcct tccaagagatactcaagagaattgcagcagtggcccagactttgtggtggtggatggtgttcctgtcatgcttccttctt atgatgaagctgtgagtagtggcatgaatgaattggcaccaggatgtccgccctctgcaggccagggatatatttttcaa gcagatgatcagaatcctccagcttatcctgaaccagatgatttgaacaggttgccagctgaatttgacacctgtgacag catttcaggctcttcagaacttctccagagtttatacacatcttctgcatgtcagatgggagctcatcctgtctcagaca gaactgatgttatcaacagcaccactgaagaagtagcatcaaccagtccaagcattgatattgctgatgaaattccattg atggatgaagacccttaatctgcacaaatatttctcatatcttgttggggcaggggaataaatcatttacatatgtatac atacatatctatatatctatatgaaaacataaagactgattacagatggaggcaaggatattttctgtttttataaatct tcctcattataatgtcatcagattttgtgtgcatatcttaaatcaactttggggttgaaagcatcagctattcaacagca gctttacaaaatgaatcctggggatttgatgagactaaacattacaggagaattacacgttcgtggaatagtgacaaatg tatctgcatcgcaggaagctttaacatgtttaaaaacaccaatgaagagtagacaaaaaggtacaagtgcaagtcacaat agaggtatttcagataatgtaaattctgttttatcaaagctgcttcatatttatgatggactataatttacaaatttaat ttattgaggggaaaataaatgattgaaattaaaatcaaaga |
|
Protein
| Protein ID | habu1_s309_g01456.t1 |
|---|---|
| Definition | - |
>habu1_s309_g01456.t1 MYHGMNPNSGDPFLEQPLPPPPPLFQRCQSKLSLVVLWLQLALCFGPAQITGENMEDTRFDTVAVCIYGFDELHACSDPG FPEYGYKMPSTGVFFESSVVRFHCQEGYRLKGPSQKLCERHFNGSLSWKPSDKPVCLQEATDCLAPTVEDAEIQIKTYTT GDKLIISCHEGFQIHFSDLDNLVSVCQDDGTWDNLPICQGCLRPLLLPHSFTNISQFESSFPVGSMIYFQCFPGYKLEGA EFLECMYNLIWSDSPPRCLDVEVCPLPPMVTHGDYICHPRPCEHYNHGTVVEFYCDPGYTLSNDYKYITCQYGKWFPSYQ VYCVKTEQAWPNNQETLLRTWKIVAFTATSVLLMLLLVILARMFQTKFKAHFLPRDTQENCSSGPDFVVVDGVPVMLPSY DEAVSSGMNELAPGCPPSAGQGYIFQADDQNPPAYPEPDDLNRLPAEFDTCDSISGSSELLQSLYTSSACQMGAHPVSDR TDVINSTTEEVASTSPSIDIADEIPLMDEDP |
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