Gene
| Gene Model ID | habu1_s309_g01458 |
|---|---|
| Locus | habu1_scaffold309 : 410736 ... 451557 : + |
| To GenomeBrowser | habu1_scaffold309:410736..451557 |
| Genes list of scaffold | habu1_scaffold309 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calpain-2 catalytic subunit | GO:0000785 GO:0004198 GO:0005509 GO:0005634 GO:0005794 GO:0005829 GO:0005886 GO:0005925 GO:0006508 GO:0007520 GO:0031143 GO:0045121 GO:0051493 GO:0070062 GO:0071230 GO:0097038 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s309_g01458.t1 | 1 | 1 | Peptidase_C2 | 45 | 344 | 0.0 | 491.7 | 0.0 | 0.0 | 490.9 |
| habu1_s309_g01458.t1 | 1 | 1 | Calpain_III | 355 | 509 | 0.0 | 201.0 | 0.0 | 0.0 | 200.2 |
| habu1_s309_g01458.t1 | 1 | 1 | EF-hand_8 | 557 | 602 | 8.4e-09 | 34.9 | 1.1e-10 | 2.4e-07 | 30.2 |
| habu1_s309_g01458.t1 | 1 | 1 | EF-hand_1 | 577 | 603 | 9.1e-10 | 37.1 | 2.8e-06 | 0.0059 | 15.8 |
| habu1_s309_g01458.t1 | 1 | 1 | EF-hand_7 | 607 | 689 | 4.3e-08 | 33.1 | 1.5e-06 | 0.0031 | 17.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s309_g01458.t1 | gi|602639050|ref|XP_007426346.1| | PREDICTED: calpain-2 catalytic subunit [Python bivittatus] | 0.0 |
| habu1_s309_g01458.t1 | gi|637257693|ref|XP_008124093.1| | PREDICTED: calpain-2 catalytic subunit isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s309_g01458.t1 | gi|641753070|ref|XP_008173418.1| | PREDICTED: calpain-2 catalytic subunit [Chrysemys picta bellii] | 0.0 |
| habu1_s309_g01458.t1 | gi|591354948|ref|XP_007071784.1| | PREDICTED: calpain-2 catalytic subunit [Chelonia mydas] | 0.0 |
| habu1_s309_g01458.t1 | gi|558209877|ref|XP_006133485.1| | PREDICTED: LOW QUALITY PROTEIN: calpain-2 catalytic subunit [Pelodiscus sinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 22.0 |
| Venom grand-1 | 6.5 |
| Pit, infrared sensing | 23.8 |
| Nose | 8.5 |
| Brain-1 | 5.9 |
| Eye | 5.5 |
| fetal fibroblast | 49.8 |
| venom gland-2 | 4.0 |
| Brain-2 | 5.6 |
| Spleen | 2.5 |
| Lung | 13.6 |
| Liver | 0.6 |
| Kidney | 7.7 |
| Pancreas | 1.0 |
| Small intestine | 1.7 |
| Large intestine | 6.4 |
| Stomach | 5.8 |
| heart | 7.6 |
| ovary | 3.8 |
| cheek muscle | 5.4 |
Transcript
| Transcript ID | habu1_s309_g01458.t1 |
|---|---|
| Definition | - |
>habu1_s309_g01458.t1 aggaggaggcccgcggccccttttctccagcctgtcccgtgaaggccggaccagccacacccagggtatagagacgctat tattttctctcctggaaatgaatcaccctcggccagcttggctctgaatcccgtccgctcgccggggcttccttccagag aggaaggcgggaggagagctgagcggggaagcggcaccatggctgggattgccgctaaattagcaaaggacaggcagatc gcgcaagggctgggctccaactccaaagccgtgaaatacttgaaccaggactttcacacgctgaggaacgagtgtctcga ggcgggccagctctttcaagacccctgtttccccgccgcggcggcttctctgggctataaagaactagggccaaactcgt tcaaaacaaaaggcatcgtctggaagaggccgacggaattgtgttccaaacctcagtttattattggaggtgccacccgg actgatatctgccaaggggctttaggagactgttggcttctagcagccattgcttctctcaccttgaatgaagaaatttt ggctcgggtggttcccagtaatcaaagtttccaagacaaatatgcaggaatcttccacttccagttctggcagtatggag agtggacagatgttgttgttgatgatcgattgccgaccaaaaatggagaactactttttgttcactcagcagagagaaat gaattctggagtgctctactggaaaaggcctatgccaaggtgaatggttcctatgaaggtctttcagggggaagcactac tgagggctttgaagacttcactggtggaattgcagagtggtatgagctgcagaaagcaccaccaaacctgttcaaaataa tccagaaagctcttcagaaaggttctctccttgggtgttctattgatatcacgaatgctgccgaaactgaggcagtcaca acccagaagctggtcaaagggcatgcatactctgtcacaggagctgaagaggtgaatttccgaggcagcatgcagaaact gatccggatccgaaatccctggggagaagttgaatggaccggaaaatggaatgataagtgtccaaactggaatggtattg atccaaaagtgagagagagaatgaccagacagcatgaagatggagaattttggatgtcattgagtgatttcctgaggcat tactctcgtcttgagatctgtaatttgactccagacactctgaccactgacatgtataaaaaatggaggttgaacttgat ggatggaaactggagaaaaggttccacggctggtggatgccgaaattatcctgatacgttttggatgaacccacaatatt tgattaaacttgaggaagaagatgaggatccagatgacccagaaagaggttgtaccttcttggttggtttgattcagaaa caccgtcggaagcagaggaagatgggagaggatatgcacacaattggctttgcaatctatgaggtgccggaacagtcttc tggcccaaaaaaggtccacctgagcaaaaactactttctcacaaaccgagcaagggaacgatccaacacattcatcaatc ttcgggaggtgttaaatcgattcaagcttcccccaggagaatatattattgtgccatccacctttgaacccaacaagaat ggggacttctgcctcagggttttctctgaaaaaaaagctgactcacaagttattgatgatgaaattgaggccaatattga agagaaagaactcactgaagatgaaattgaacccaattttaagaaattatttaagcaattagctggagaggatgctgaga tctcagcctttgaactgtgtaatattctgaaaaaaatcttagcaaaacgtcaagatattaaatctgatggctttagtatg gaaacttgcaaaattatggttgatctattagatactgatggaagtggtaagctaggactgaaagaattccacatactttg gacaaagattcagaaataccagcaaatttatcgggatatggatgtagattgttctggcaccatgaactcctatgagatgc ggaaagccttggagcaagcaggatttaagttggattgccaattgcatcaagtcattgtggcccgttttgctgatgagcag ctgatcattgattttgataattttgttaggtgcttgattcgactggagactttgttcaagatatttaagaaactggatac tgagaaaacaggaacagtacagatgaatcttggcacttggttatgctttactaccatatgaaaaagcaatgtgccaaatg gcgaaaagttctcttgggaatcaacttggaacatttttaaaaagggcttattatacatcttgtacttatggtgaagctgc taaagaagagagtactaaaaaaaaaannnnaaaaaagcaactgtcaaacaatctcaatatattagctgtaactgtttacg taatactataatatttgcttaaactcttccaggtttgccataaggtaaatttccgggagttgtcattctattatttctaa gaatattgggaatggctgcattttctattagaaattagctttgtattacagattattttaaccatctgaaatctgattca tcaataaagaatgtttttgccattcagata |
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Protein
| Protein ID | habu1_s309_g01458.t1 |
|---|---|
| Definition | - |
>habu1_s309_g01458.t1 MAGIAAKLAKDRQIAQGLGSNSKAVKYLNQDFHTLRNECLEAGQLFQDPCFPAAAASLGYKELGPNSFKTKGIVWKRPTE LCSKPQFIIGGATRTDICQGALGDCWLLAAIASLTLNEEILARVVPSNQSFQDKYAGIFHFQFWQYGEWTDVVVDDRLPT KNGELLFVHSAERNEFWSALLEKAYAKVNGSYEGLSGGSTTEGFEDFTGGIAEWYELQKAPPNLFKIIQKALQKGSLLGC SIDITNAAETEAVTTQKLVKGHAYSVTGAEEVNFRGSMQKLIRIRNPWGEVEWTGKWNDKCPNWNGIDPKVRERMTRQHE DGEFWMSLSDFLRHYSRLEICNLTPDTLTTDMYKKWRLNLMDGNWRKGSTAGGCRNYPDTFWMNPQYLIKLEEEDEDPDD PERGCTFLVGLIQKHRRKQRKMGEDMHTIGFAIYEVPEQSSGPKKVHLSKNYFLTNRARERSNTFINLREVLNRFKLPPG EYIIVPSTFEPNKNGDFCLRVFSEKKADSQVIDDEIEANIEEKELTEDEIEPNFKKLFKQLAGEDAEISAFELCNILKKI LAKRQDIKSDGFSMETCKIMVDLLDTDGSGKLGLKEFHILWTKIQKYQQIYRDMDVDCSGTMNSYEMRKALEQAGFKLDC QLHQVIVARFADEQLIIDFDNFVRCLIRLETLFKIFKKLDTEKTGTVQMNLGTWLCFTTI |
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