Gene
| Gene Model ID | habu1_s309_g01464 |
|---|---|
| Locus | habu1_scaffold309 : 642470 ... 660229 : - |
| To GenomeBrowser | habu1_scaffold309:642470..660229 |
| Genes list of scaffold | habu1_scaffold309 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| wd repeat domain isoform cra_c | GO:0005654 GO:0005737 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s309_g01464.t1 | 1 | 1 | WD40 | 3 | 25 | 5.8e-06 | 25.9 | 1.3e-08 | 0.00019 | 21.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s309_g01464.t1 | gi|119590128|gb|EAW69722.1| | WD repeat domain 26, isoform CRA_c [Homo sapiens] | 0.0 |
| habu1_s309_g01464.t1 | gi|585190430|ref|XP_006746504.1| | PREDICTED: WD repeat-containing protein 26 [Leptonychotes weddellii] | 0.0 |
| habu1_s309_g01464.t1 | gi|10437006|dbj|BAB14955.1| | unnamed protein product [Homo sapiens] | 0.0 |
| habu1_s309_g01464.t1 | gi|34783428|gb|AAH31471.2| | WDR26 protein, partial [Homo sapiens] | 0.0 |
| habu1_s309_g01464.t1 | gi|211828661|gb|AAH63817.2| | WDR26 protein, partial [Homo sapiens] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 12.2 |
| Venom grand-1 | 14.1 |
| Pit, infrared sensing | 11.0 |
| Nose | 8.9 |
| Brain-1 | 11.6 |
| Eye | 12.1 |
| fetal fibroblast | 21.9 |
| venom gland-2 | 11.4 |
| Brain-2 | 11.7 |
| Spleen | 9.8 |
| Lung | 8.5 |
| Liver | 13.1 |
| Kidney | 9.7 |
| Pancreas | 8.7 |
| Small intestine | 8.5 |
| Large intestine | 8.0 |
| Stomach | 9.2 |
| heart | 13.0 |
| ovary | 32.8 |
| cheek muscle | 15.7 |
Transcript
| Transcript ID | habu1_s309_g01464.t1 |
|---|---|
| Definition | - |
>habu1_s309_g01464.t1 gatgactgctctgagctttggctctggaatgtacaaacgggggagctaaggacaaagatgagtcagtcccatgaggatag cttaaccagtgtggcctggaatccagatggaaaacgtttcgtgacaggagggcagcgtgggcaattttaccagtgtgatt tagatggtaatctcctagactcctgggaaggagtaagagtgcagtgcctgtggtgcttgagtgatggaaagactgtgctg gcatcggacacacaccagcgaattcggggttataactttgaggaccttacagacagaaatatagtacaagaagaccatcc aattatgtcttttactatttcaaaaaatggccggctagctttgttaaatgtcgcaactcagggagttcatttatgggatt tgcaagacagagttttagtgagaaagtaccaaggtgttacacaagggttttacacaattcattcatgttttggaggccat aatgaagacttcatcgctagtggcagtgaagtgtctaaaaactacccagctgtagttgaagctgatggcaccttatttag attcggactgcctgaggctgttgcctctttgcattgaattgttgcaaatatagctgctgtgaaagtctctatgtacaaaa aaagtaacagatttaaatgtcataacctcttaaatgtaaagatcataaagtatatatttggcacaaacgtagtgagctgc caattgcggaactgacggggcacacacgtacagtcaactgcgtgagctggaacccacaaattccatccatgatggccagc gcctctgatgatggcactgttagaatatggggaccatcaccttttgtagacagccaggatattgaagaggaatgcagtag catggatagttgatggtgaatttggagcagacgacttctgtttaacttaaatttagtcgtattttaaatggcttgggatt tggtgcaaacaaacatgattgatagctggacagacatgctcatcatgaaaatgaaccattttttaagcccgactggggcc aaacattttaccaccttgcttcatagtaaacagttgagatgaagcacgtcgttagaacgttgttggacaccatgttgaag taaccccccatcggttgtgaagaactgtgctacattcaggctaaccattgaactccgtatatacattttccccttctgcc attttgtcaggcagactactgttcttgttgctcttctgtgtaatgaagtttaaatgcttgtttggaaaaccttttattta acagtttagaaagcttgatagaaagagtgctttagtctgaagagtacatgttggataggaaagtatttccttctcttgtt tctctgagtctgccttatttagctcgagatctttgcagcttggttcatggattctagccttgcccgttgcgcagtatatc caaatccagatgtaaaaccagtgaatgacatgaaaagcactctcagtatcacacttgacaaaaggttttgtacttttcac gtagctcgtaaccctataaatgggtgaacagcacaaatttttttaagaataaattatttatagcattaaaatgactttga tttgtatacgtttggaaaataaaccagcttaaaaagtgtcatctacacgttaatgcagtataattggtgctcctcttgag tgttgtgtaagaccatttggctagaaggagttttacacagattatataaagtattattttaaaaaaaaaaagcctttgtt taccaacaaaataatttgaaaggtttcagaatcaccaataaaactattacaatgtaatttctgaagttaataaaatgaaa attccagattggctaaaagttgtgcaatgattcttatttgaaacattaaaaactaaaatggggatggagtaatattttag gatcatttcccaaaattagtggattgactttgtgaatttaaatatgtacattatacaaatgttccacataatgttcaccc cgtaattgttttctcaggggatgcttgttaatagtttgatgttaggaatgggttgttgtctttagtttttttatgcaacc cgttcccacccccgcccccccacccccaaatggcctggtgtttgccctgagtaactgttctaaattaaaagatggaaaga cacacctctgtgtaacaatgaaataacaacaaatcatatggggaaaaaaaccaagcccaatcaagctaaaataaatggaa agctctttaattttgggaggaaagtcccatatttggaagaaaacgtacattgcttgagcttaagcatgatctttcatact cagattctgtgataagcaatcacagtcagtgcacttcagtgtatttcataactcagatttaacatgtgcttcatagcatt tgatttaatcagttatgtctcacaaaatttctttaaatactgtcaaattaggaaagctggtactccaattacttaatgta ataacttattttttataattcaaatgacaaaaactgtcttagaagaccaggcttacagaagtcttttaaagtaatattgc tttcctcttatgttctctaatagattgaactcattttatttcagctcattttatgccgtagtgtttctttctgtttgcta tagtcaattcatatatatattctgttcatttgacattaagttcttttatttgaaattgcttaatagttatttttgagctt ctgtaattctgatttattacagatacttgcagatactcccattcaacatcttgaaatgctttacatctctataaccaaca tggtactggcactaaaattgcatattaactcaaaactattttaggagattagagcaaaaattaagagtggctgaacctga aacggcttgcataatttaatttcttcaggttattcaaagcaatctggtgcttgcaaataaaatttcatgcatagacttta atgaacatgtttgaacctataatttacccttctttgaaatataacactaaagggaaactaagttaaaagcactgaaggga gcacattactgaattttcttctaaggaattaaaaaaaatacttgtgaaagcatttcagaagctatgcagttcttaagtag ctgctccagatgtagaattaacatttgttgccaggctgaacttcctatgactacattgtgagacaaattgtcccacagtg ttaacactgctaggactttttgtaagtggacaaaacagtgttttctggaatgtagattggaaagcatctgtgtcactttt catataaactaaaaactaaattcaccattataaaaagatatggaagaggcgtatctgcaatattctcattttcatacagt agatatttcccaatctcagctgtaaattctagagcaatcattaattgttcatacaacagagatgatcaatgaaaacatgt tagcattttgaccatcaattccaaactaggcatgccaaccataaattatcttgccacaatgcttctcatctttatcaggt aagtcactttaaaaatagcacaaaagaggaaaaggaatttaatttttatgtaacccataaatagccttgtaaatgtgtag ctagcttttctcagttttgaaatgaggggaacacaagaaaaagttaatatggagtcacaggtagaaaactacccaatttt tcccaataatttcattctgacttccaaactggtattgttgaatgacatttaaataatgctaggtgtttagtgccatgtta actacaaaaatctcccacccttttaaaatggcttaaaattatttctcgtactaattttatgctggcaatatattagggaa aggagaattagtaacctttttaacagcagaagaatgtcttaatttgtaatttgggcagaaggggaaaataaaccaatttt cagtaagatttggt |
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Protein
| Protein ID | habu1_s309_g01464.t1 |
|---|---|
| Definition | - |
>habu1_s309_g01464.t1 MSQSHEDSLTSVAWNPDGKRFVTGGQRGQFYQCDLDGNLLDSWEGVRVQCLWCLSDGKTVLASDTHQRIRGYNFEDLTDR NIVQEDHPIMSFTISKNGRLALLNVATQGVHLWDLQDRVLVRKYQGVTQGFYTIHSCFGGHNEDFIASGSEVSKNYPAVV EADGTLFRFGLPEAVASLH |
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