Gene
| Gene Model ID | habu1_s3103_g10899 |
|---|---|
| Locus | habu1_scaffold3103 : 120016 ... 157385 : + |
| To GenomeBrowser | habu1_scaffold3103:120016..157385 |
| Genes list of scaffold | habu1_scaffold3103 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| colorectal mutant cancer | GO:0005509 GO:0005634 GO:0005737 GO:0005886 GO:0010633 GO:0050680 GO:0090090 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3103_g10899.t2 | 1 | 1 | EF-hand_6 | 34 | 61 | 2.8e-06 | 26.7 | 9.9e-09 | 2.9e-05 | 23.5 |
| habu1_s3103_g10899.t2 | 1 | 1 | EF-hand_7 | 35 | 89 | 2.3e-08 | 34.0 | 1.5e-11 | 4.5e-08 | 33.1 |
| habu1_s3103_g10899.t2 | 1 | 1 | EF-hand_1 | 35 | 61 | 1.4e-07 | 30.3 | 4.5e-08 | 0.00013 | 20.9 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.8 |
| Venom grand-1 | 1.1 |
| Pit, infrared sensing | 0.8 |
| Nose | 0.8 |
| Brain-1 | 0.6 |
| Eye | 0.8 |
| fetal fibroblast | 4.4 |
| venom gland-2 | 2.6 |
| Brain-2 | 0.5 |
| Spleen | 0.9 |
| Lung | 0.7 |
| Liver | 0.4 |
| Kidney | 1.7 |
| Pancreas | 0.8 |
| Small intestine | 0.6 |
| Large intestine | 0.4 |
| Stomach | 0.9 |
| heart | 0.6 |
| ovary | 8.8 |
| cheek muscle | 0.4 |
Transcript
| Transcript ID | habu1_s3103_g10899.t1 |
|---|---|
| Definition | - |
>habu1_s3103_g10899.t1 acagtattctttccatttgctccagaaagatattccgttcgttcgcttacgttgcaggaaaatgagccgaaatcacaaat aagcacgcaaacttccacctctgcgtccaccgtcttccacccaactctcccgtgctcttccgttgcaagccgacgaactc ctggcttttgcttccaaagaaaagggccagagcgggtctcgtgcgccagtcaaatgcgcgcgccgtccctaggatgtgcc tgattggcgcacgaggcggcgcgcgctgaattcgtgcgcgagaaggagcggcggagcgtctgcgtttccccgccctcctc gttttcattgtgccgcctctcgtgctttgtatgcgcgacagctgagctgggagggnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnntggcgagctggaggttccgggaaccttggacgcctgagcgggcttgagtcgccgccgccg ccgcttcttcggggcagcgcgtatgatggcgacagcggctggcccggcagtggtggtagaggtgagcgtgagcagcaccg ggagcagcagcagcgacacttccagcacgggcgaggaggagaggatgaggcgcctcttccagacgtgcgatggggacggc gacggctttatcagcaggaatgatttgctgatggtgtgtcgccaactgaacatggaagaatctgtgattgagatcatgca tcagcttggtgcggatgaacatggaaaaatttcctttcaagattttacacgatgtcgtatgcagcttgtacgagaaatca ggaaggaagaagtggagctttctgtgaagttggatgactcgtgtaaaaagaaaactttaagggatagaatagcttcatgg ccaaccagcagcaataacagtttaggtgccctttctggagctagagagagttgggaatatgattctggagctagagatct tcaaagccccgatttgcacaattgttcaactttacaaaagccatttgaatatggtgggaatactatgaatcaacaagttg cccttcaaagattgcttacacaggccaccaatctaagcaattcagtcggaggaagttatctagaacttgccaatactgac aatgaaaaaggtcaccttccattagatactgaacattctgttgccagtcagaaatatagatctatgagctggcagataat ggtgtataaaactatcgttgatcagagactggtagttaaaacaaccagggttttgaataaaatttgatgacttgactcta aactaccagcatttactgaacattcttcaaaaaagaaagtatgtatagtgtatactgtttggaaaagatctacttatctt ggagaaagttctactatcaataactcaattattctttctaaaaaatagtgctgtaagtctgggtctaaaaaaatcagaat attatttttgttccaaccaaagaagaaaatgaaatttacaatataattttgtataaaagttagccaaagatcataaaagc atttttactccatctttttgtctattctgtccccttttttaaaattgctctctgaattacactgcaacacattaaaatat tacacaaaataaactcagtaagtgagaattttgcc |
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| Transcript ID | habu1_s3103_g10899.t2 |
| Definition | - |
>habu1_s3103_g10899.t2 gcggagcgtctgcgtttccccgccctcctcgttttcattgtgccgcctctcgtgctttgtatgcgcgacagctgagctgg gagggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntggcgagctggaggttccgggaaccttgga cgcctgagcgggcttgagtcgccgccgccgccgcttcttcggggcagcgcgtatgatggcgacagcggctggcccggcag tggtggtagaggtgagcgtgagcagcaccgggagcagcagcagcgacacttccagcacgggcgaggaggagaggatgagg cgcctcttccagacgtgcgatggggacggcgacggctttatcagcaggaatgatttgctgatggtgtgtcgccaactgaa catggaagaatctgtgattgagatcatgcatcagcttggtgcggatgaacatggaaaaatttcctttcaagattttacac gatgtcgtatgcagcttgtacgagaaatcaggaaggaagaagtggagctttctgtgaagttggatgactcgtgtaaaaag aaaactttaagggatagaatagcttcatggccaaccagcagcaataacagtttaggtgccctttctggagctagagagag ttgggaatatgattctggagctagagatcttcaaagccccgatttgcacaattgttcaactttacaaaagccatttgaat atggtgggaatactatgaatcaacaagttgcccttcaaagattgcttacacaggccaccaatctaagcaattcagtcgga ggaagttatctagaacttgccaatactgacaatgaaaaaggtcaccttccattagatactgaacattctgttgccagtca gaaatatagatctatgagctggcagataatggtgtataaaactatcgttgatcagagactggtagttaaaacaaccaggg ttttgaataaaatttgatgacttgactctaaactaccagcatttactgaacattcttcaaaaaagaaagtatgtatagtg tatactgtttggaaaagatctacttatcttggagaaagttctactatcaataactcaattattctttctaaaaaatagtg ctgtaagtctgggtctaaaaaaatcagaatattatttttgttccaaccaaagaagaaaatgaaatttacaatataatttt gtataaaagttagccaaagatcataaaagcatttttactccatctttttgtctattctgtccccttttttaaaattgctc tctgaattacactgcaacacattaaaatattacacaaaataaactcagtaagtgagaattttgcc |
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Protein
| Protein ID | habu1_s3103_g10899.t1 |
|---|---|
| Definition | - |
>habu1_s3103_g10899.t1 MMATAAGPAVVVEVSVSSTGSSSSDTSSTGEEERMRRLFQTCDGDGDGFISRNDLLMVCRQLNMEESVIEIMHQLGADEH GKISFQDFTRCRMQLVREIRKEEVELSVKLDDSCKKKTLRDRIASWPTSSNNSLGALSGARESWEYDSGARDLQSPDLHN CSTLQKPFEYGGNTMNQQVALQRLLTQATNLSNSVGGSYLELANTDNEKGHLPLDTEHSVASQKYRSMSWQIMVYKTIVD QRLVVKTTRVLNKI |
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| Protein ID | habu1_s3103_g10899.t2 |
| Definition | - |
>habu1_s3103_g10899.t2 MMATAAGPAVVVEVSVSSTGSSSSDTSSTGEEERMRRLFQTCDGDGDGFISRNDLLMVCRQLNMEESVIEIMHQLGADEH GKISFQDFTRCRMQLVREIRKEEVELSVKLDDSCKKKTLRDRIASWPTSSNNSLGALSGARESWEYDSGARDLQSPDLHN CSTLQKPFEYGGNTMNQQVALQRLLTQATNLSNSVGGSYLELANTDNEKGHLPLDTEHSVASQKYRSMSWQIMVYKTIVD QRLVVKTTRVLNKI |
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