Gene
| Gene Model ID | habu1_s3103_g10900 |
|---|---|
| Locus | habu1_scaffold3103 : 187416 ... 296574 : + |
| To GenomeBrowser | habu1_scaffold3103:187416..296574 |
| Genes list of scaffold | habu1_scaffold3103 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| colorectal mutant cancer partial | GO:0005509 GO:0005634 GO:0005737 GO:0005886 GO:0010633 GO:0050680 GO:0090090 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3103_g10900.t1 | 3 | 1 | MCC-bdg_PDZ | 387 | 442 | 0.0 | 193.7 | 1.9e-14 | 3.5e-11 | 42.7 |
| habu1_s3103_g10900.t1 | 3 | 2 | MCC-bdg_PDZ | 555 | 621 | 0.0 | 193.7 | 4.2e-32 | 7.8e-29 | 99.3 |
| habu1_s3103_g10900.t1 | 3 | 3 | MCC-bdg_PDZ | 883 | 951 | 0.0 | 193.7 | 2.6e-26 | 4.9e-23 | 80.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3103_g10900.t1 | gi|675624550|ref|XP_008940511.1| | PREDICTED: colorectal mutant cancer protein, partial [Merops nubicus] | 0.0 |
| habu1_s3103_g10900.t1 | gi|699705070|ref|XP_009892113.1| | PREDICTED: colorectal mutant cancer protein [Charadrius vociferus] | 0.0 |
| habu1_s3103_g10900.t1 | gi|697037459|ref|XP_009581148.1| | PREDICTED: colorectal mutant cancer protein, partial [Fulmarus glacialis] | 0.0 |
| habu1_s3103_g10900.t1 | gi|686611488|ref|XP_009282449.1| | PREDICTED: colorectal mutant cancer protein [Aptenodytes forsteri] | 0.0 |
| habu1_s3103_g10900.t1 | gi|514766311|ref|XP_005024421.1| | PREDICTED: colorectal mutant cancer protein [Anas platyrhynchos] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.0 |
| Venom grand-1 | 2.3 |
| Pit, infrared sensing | 4.0 |
| Nose | 3.1 |
| Brain-1 | 2.7 |
| Eye | 2.7 |
| fetal fibroblast | 7.8 |
| venom gland-2 | 7.0 |
| Brain-2 | 2.2 |
| Spleen | 3.4 |
| Lung | 4.7 |
| Liver | 2.4 |
| Kidney | 3.3 |
| Pancreas | 2.2 |
| Small intestine | 3.0 |
| Large intestine | 3.4 |
| Stomach | 3.4 |
| heart | 4.0 |
| ovary | 18.2 |
| cheek muscle | 2.4 |
Transcript
| Transcript ID | habu1_s3103_g10900.t1 |
|---|---|
| Definition | - |
>habu1_s3103_g10900.t1 nnnnnnnnnnnnntacttctgcccggcggatctctgagatggcggctctttcggtcagggaagacctgtgtgtcttccac cgagatcgggtcgtccttcgcttagaccccaccttcgttcccaaagttaactcccttttccatagggcccaggagatcgt gcttcccgatttctgccctaatctatcccatactctggaacggcaatggcattccctggatgttcgccgggcccttcgtt attacatcaaaagaacggccacctttcgtgcttctgaggctctattcatttcattccacccgtcctccagaggccggagg gtttcggcttctacgattggccgttggataagagcttgcattgcggaagcgtatcaggccaattcctggcctgtacctcg ccggatcacagcccactctacgcgcagcgcagccacctcggcggcctgggctacgcaggcccccatcgaggttatctgta gggcagctacgtggtcttccccgtctcctttcatccgacattataaattggacagaagattcattacagctcaactgttc cacttagcagcactggcatctttgaaaggcgacatcgttgatcttaataagcgcttacagcaaacagaacgagagagaga tttgttggaaaagaaattggcaaaagcccagtgtgagcaatctcacctaatgagagagcatgaagatgtgcaagagcgta caacgcttcgttatgaggaacggatcacagagcttcatagcattattgcagagctaaataagaaaatagatcgactgcaa ggaactactataagagaagaagatgaatattctgaactacgatcagaactcagtcagagtcagcatgaggtcaatgatga ttcacatagcatggaccaagatcagacctctgcttccattccagagaaccagtcaactatggtcacagctgacattgata cttgtagtgacttgaactcggaattgcagagagtgctgacaggactggagaatgttgtctgtgggagaaagaagagcagc tgtaacttgtctgtggcagatgtcgaccggcatattgaacagctcacaactgccagtgaacactgtgacttagccattaa gacagttgaggagattgaaggtgtgcttgggcgggatttgtacccaaatttggctgaagaaaggtcccgatgggagaagg aactggcaggtttgagggaagagaatgaaagcttaacggcaatgttgtgcagcaaggaagaagaattaaacagaactaag gccaccatgaatgctatccgtgaagaacgagacagattacgcagaaaggttagagaactacagacccgattacagagtgt tcaggcaacaggcccatcaagtccaggtcgcctcacttctgcaaaccgtcccattaatcctagcactggagaactaagcg ccagcagcagtagtaatgacattcccattgctaagattgcggagagagtgaagctttcaaagacgaggtcagaatcctca gcatctgatcgtcctgtcctgggatcagaaatcagcagcataggagtatccagtagtgtggcagaacacctggcacattc tcttcaagactgttccaatatacaagagattttccaaacactctactcacatggatctgctatttctgaaagcaaaatta gagaatttgaagtagaaacagaacggttgaacagtcgcatcgagcacttaaaatctcagaatgatttattgacaataact ctggaagagtgtaagagcaatgctgaaaggatgagcatgttggttggaaaatatgaatccaatgccacagccctcaggct ggcattgcaatacagtgaacagtgcattgaagcctatgagctgttgctagcattggctgaaagtgaacagtctctcattc ttggacaattcagagctgcaggtgttgggtctgttggggatcaaacaggagatgaaagcatcacccagatgcttaaaaga gcccatgactgtaggaagacagctgagaatgcagccaaagccctgttgatgaaattggatggaagctgtgggggagccta tgcagttactggctgtagtgtacagccctgggagagtctttcttccaacagtcataccagtactactagttcaacagcaa gcagctgtgatacagagttcacaaaggaggatgagcagagattgaaggactacattcaacaactaaaaaatgatagagca gctattaaattaactatgctggagctggagagcatccatattgaccccctcagttatgatgtcaagcctcgtggagacag tcaaagactggatctagaaaacgctgtacttatgcaggaactcatggcaatgaaggaagaaatggcagaactgaaagcac agctgtacttgctagaaaaagagaagaaagctctcgagttgaagttgagcagtcgagaagctcaggaacaagcatatttg gtccacattgagcacctaaagtcagaagtagaagagcaaaaagaacagagaatgaggtctctcagttcaactggtagcag cagcaaagacaagtcaagtaaggagtgcacagatggcacatcagcatcattaacactaactgagctcaaatcttacaatg aaagtgagctgactgcagaattggcaaatgccctcagacgagaaaagaaactgaaatccagagtgcaggagttggtgaat gccttggaaagactaactaagagcagcgaaattcggcatcagcagtctgcagagtttgttaatgatttgaaaagagcaaa cagtaaccttgtggctgcctatgagaaagcaaagaagaagcaccaaaataagctgaagaaactggaatcccagatgatgg caatggtggaaagacatgagactcaagtcaggatgctcaaacaaagaattgctttgctggaagaagagaattcaagaccc cataccaatgaaacatcgctttaagagatattagttttctttaaatcaatgtgccattacaaaaatgactccttacagga ctccttgagatagtaaacacagttaattgatacaaacca |
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Protein
| Protein ID | habu1_s3103_g10900.t1 |
|---|---|
| Definition | - |
>habu1_s3103_g10900.t1 MAALSVREDLCVFHRDRVVLRLDPTFVPKVNSLFHRAQEIVLPDFCPNLSHTLERQWHSLDVRRALRYYIKRTATFRASE ALFISFHPSSRGRRVSASTIGRWIRACIAEAYQANSWPVPRRITAHSTRSAATSAAWATQAPIEVICRAATWSSPSPFIR HYKLDRRFITAQLFHLAALASLKGDIVDLNKRLQQTERERDLLEKKLAKAQCEQSHLMREHEDVQERTTLRYEERITELH SIIAELNKKIDRLQGTTIREEDEYSELRSELSQSQHEVNDDSHSMDQDQTSASIPENQSTMVTADIDTCSDLNSELQRVL TGLENVVCGRKKSSCNLSVADVDRHIEQLTTASEHCDLAIKTVEEIEGVLGRDLYPNLAEERSRWEKELAGLREENESLT AMLCSKEEELNRTKATMNAIREERDRLRRKVRELQTRLQSVQATGPSSPGRLTSANRPINPSTGELSASSSSNDIPIAKI AERVKLSKTRSESSASDRPVLGSEISSIGVSSSVAEHLAHSLQDCSNIQEIFQTLYSHGSAISESKIREFEVETERLNSR IEHLKSQNDLLTITLEECKSNAERMSMLVGKYESNATALRLALQYSEQCIEAYELLLALAESEQSLILGQFRAAGVGSVG DQTGDESITQMLKRAHDCRKTAENAAKALLMKLDGSCGGAYAVTGCSVQPWESLSSNSHTSTTSSTASSCDTEFTKEDEQ RLKDYIQQLKNDRAAIKLTMLELESIHIDPLSYDVKPRGDSQRLDLENAVLMQELMAMKEEMAELKAQLYLLEKEKKALE LKLSSREAQEQAYLVHIEHLKSEVEEQKEQRMRSLSSTGSSSKDKSSKECTDGTSASLTLTELKSYNESELTAELANALR REKKLKSRVQELVNALERLTKSSEIRHQQSAEFVNDLKRANSNLVAAYEKAKKKHQNKLKKLESQMMAMVERHETQVRML KQRIALLEEENSRPHTNETSL |
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