Gene
| Gene Model ID | habu1_s3103_g10903 |
|---|---|
| Locus | habu1_scaffold3103 : 350696 ... 355895 : - |
| To GenomeBrowser | habu1_scaffold3103:350696..355895 |
| Genes list of scaffold | habu1_scaffold3103 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| signal recognition particle 19 kda protein isoform x1 | GO:0006614 GO:0008312 GO:0048500 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s3103_g10903.t1 | 1 | 1 | SRP19 | 16 | 116 | 2.7e-29 | 101.6 | 2.2e-33 | 3.3e-29 | 101.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s3103_g10903.t1 | gi|602646410|ref|XP_007429636.1| | PREDICTED: signal recognition particle 19 kDa protein isoform X2 [Python bivittatus] | 0.0 |
| habu1_s3103_g10903.t1 | gi|602646408|ref|XP_007429635.1| | PREDICTED: signal recognition particle 19 kDa protein isoform X1 [Python bivittatus] | 0.0 |
| habu1_s3103_g10903.t1 | gi|327276631|ref|XP_003223071.1| | PREDICTED: signal recognition particle 19 kDa protein [Anolis carolinensis] | 0.0 |
| habu1_s3103_g10903.t1 | gi|591361119|ref|XP_007055477.1| | PREDICTED: signal recognition particle 19 kDa protein isoform X1 [Chelonia mydas] | 0.0 |
| habu1_s3103_g10903.t1 | gi|530574550|ref|XP_005281670.1| | PREDICTED: signal recognition particle 19 kDa protein [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 31.6 |
| Venom grand-1 | 74.0 |
| Pit, infrared sensing | 38.4 |
| Nose | 33.7 |
| Brain-1 | 19.3 |
| Eye | 32.9 |
| fetal fibroblast | 94.1 |
| venom gland-2 | 129.3 |
| Brain-2 | 25.7 |
| Spleen | 46.7 |
| Lung | 28.1 |
| Liver | 43.0 |
| Kidney | 43.1 |
| Pancreas | 113.3 |
| Small intestine | 27.7 |
| Large intestine | 34.7 |
| Stomach | 53.8 |
| heart | 20.2 |
| ovary | 118.6 |
| cheek muscle | 35.1 |
Transcript
| Transcript ID | habu1_s3103_g10903.t1 |
|---|---|
| Definition | - |
>habu1_s3103_g10903.t1 gttcgccgtggctggtgaatgggcgagtcacgaaaagccgctgccgcctgccgatgcggaggccatggcttgggctgcgt cctctttaccctccgataaatctcggtttatctgtgtatatccagcctatataaataacaagaagacaatagcagaagga agaagaatacctcttgacaaagctattgaaaatcctacatctacagaaatccaagatgtttgtgcagcagttggtcttaa tgtgcttttggagaaaaacaaaatgtatcccagggaatggaaccgtgatgcgcaatataggggtagagttcgcattcagc tgaagcaggaagatggtaatctatgtcagcctcagtttccaacacgtaaggcagtgatgttatatgcagcagaaacaatt cccaaactgaaaacaaggacacagaaaatgggaggcagtgacccaagtctacagcaaggagaaggaggcaaaaaaaacaa aggaaaaaagaagaaatgaatgtgacatggactaatatatattcaaatgagtatggttacagaagaatgatgatttcaaa tgacggacagaccaatgagaacatgcaaagctattttgtggtagtttttgaattagaatgaatttcattttgcataaaat tatggttgaactatttgggaacataaccagaaaaatcctcttctaatatttaaaaaatatggaaaaataatgttttagtg tattgaactgtatgtacaaatgaatgcaaagctgtttgtttttgccttggatacattttcacttgataactttacaatga aatacattgtcactgtgatgttgggcttctctttattacaataaacatgtttggattaaactgttta |
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Protein
| Protein ID | habu1_s3103_g10903.t1 |
|---|---|
| Definition | - |
>habu1_s3103_g10903.t1 MAWAASSLPSDKSRFICVYPAYINNKKTIAEGRRIPLDKAIENPTSTEIQDVCAAVGLNVLLEKNKMYPREWNRDAQYRG RVRIQLKQEDGNLCQPQFPTRKAVMLYAAETIPKLKTRTQKMGGSDPSLQQGEGGKKNKGKKKK |
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