Gene
| Gene Model ID | habu1_s313_g01501 |
|---|---|
| Locus | habu1_scaffold313 : 500356 ... 527423 : + |
| To GenomeBrowser | habu1_scaffold313:500356..527423 |
| Genes list of scaffold | habu1_scaffold313 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calpain-13- partial | GO:0006508 GO:0008234 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s313_g01501.t1 | 2 | 1 | EF-hand_7 | 27 | 85 | 3.3e-11 | 43.1 | 3.2e-08 | 6.8e-05 | 22.9 |
| habu1_s313_g01501.t1 | 1 | 1 | EF-hand_8 | 45 | 88 | 3.6e-06 | 26.4 | 8.8e-08 | 0.00019 | 20.9 |
| habu1_s313_g01501.t1 | 1 | 1 | EF-hand_1 | 64 | 89 | 3.0e-09 | 35.4 | 2.0e-07 | 0.00041 | 19.4 |
| habu1_s313_g01501.t1 | 1 | 1 | EF-hand_5 | 66 | 86 | 2.5e-06 | 26.5 | 1.7e-06 | 0.0036 | 16.5 |
| habu1_s313_g01501.t1 | 2 | 2 | EF-hand_7 | 95 | 150 | 3.3e-11 | 43.1 | 1.1e-06 | 0.0024 | 17.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s313_g01501.t1 | gi|602675069|ref|XP_007443019.1| | PREDICTED: calpain-13-like, partial [Python bivittatus] | 0.0 |
| habu1_s313_g01501.t1 | gi|637257930|ref|XP_008124129.1| | PREDICTED: calpain-13 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s313_g01501.t1 | gi|637257925|ref|XP_008124128.1| | PREDICTED: calpain-13 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s313_g01501.t1 | gi|557262242|ref|XP_006016650.1| | PREDICTED: calpain-13-like [Alligator sinensis] | 0.0 |
| habu1_s313_g01501.t1 | gi|699624724|ref|XP_009880271.1| | PREDICTED: calpain-13 [Charadrius vociferus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.7 |
| Venom grand-1 | 0.4 |
| Pit, infrared sensing | 1.0 |
| Nose | 5.1 |
| Brain-1 | 0.0 |
| Eye | 0.2 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.2 |
| Spleen | 0.0 |
| Lung | 0.4 |
| Liver | 0.0 |
| Kidney | 0.3 |
| Pancreas | 0.6 |
| Small intestine | 79.1 |
| Large intestine | 43.1 |
| Stomach | 30.0 |
| heart | 0.0 |
| ovary | 0.1 |
| cheek muscle | 1.1 |
Transcript
| Transcript ID | habu1_s313_g01501.t1 |
|---|---|
| Definition | - |
>habu1_s313_g01501.t1 ggttggctgtgcaatgttgcctgttgtaaatggctagaaacataatgagtgaataataatgaggtgtctcacatggactg atattttgcagctgatttttatacatgcatttttttttgatgcaggataagctcacctggaatccagacgactatgaaag tgtcttcttaagatatgcttatcagaactcctacttagatgcctcacagttgcaaaggattcttaatggcattctcctaa aagatctaatggctagcctgggatctggagatggattcagctttgactcatgcaaaagccttttagctctgatggatata aatgctaatggaaaactttcactccaagaatttaaaagactgtggagagctttcaggaaatatgaggatatatttggaag agaggatgaaaataattctggattcctaactgtttcaaatttgcaaagagttgtgcaaaaaacaggcctgtatgtcagtg acaaactcctccagctcctggttttacgatatggagactcagcgcagagaataaactttcctgattttgtatgctgtatg tttcgtcttgagataatggcaaaagcattcctcaatttatcaaaagataagggaagtatctgctttactgaagatgagtg gatgaccatgatcatgtattgctgatcagatgatactactttctaaatacaggctgctgacttcttagattttcaaaaga aagttgttgagtgtgaaggcctatttaattggagatgaaatagaaccagtcaagggcttcaagcaatctagacataatca aaagaataaaaaagcatgcaaagaatggtacc |
|
Protein
| Protein ID | habu1_s313_g01501.t1 |
|---|---|
| Definition | - |
>habu1_s313_g01501.t1 MHFFLMQDKLTWNPDDYESVFLRYAYQNSYLDASQLQRILNGILLKDLMASLGSGDGFSFDSCKSLLALMDINANGKLSL QEFKRLWRAFRKYEDIFGREDENNSGFLTVSNLQRVVQKTGLYVSDKLLQLLVLRYGDSAQRINFPDFVCCMFRLEIMAK AFLNLSKDKGSICFTEDEWMTMIMYC |
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