Gene
| Gene Model ID | habu1_s313_g01503 |
|---|---|
| Locus | habu1_scaffold313 : 582852 ... 679625 : - |
| To GenomeBrowser | habu1_scaffold313:582852..679625 |
| Genes list of scaffold | habu1_scaffold313 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| lysocardiolipin acyltransferase 1 | GO:0005783 GO:0008152 GO:0016020 GO:0016746 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s313_g01503.t1 | 1 | 1 | Acyltransferase | 95 | 252 | 3.5e-20 | 71.7 | 3.5e-24 | 5.1e-20 | 71.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s313_g01503.t1 | gi|602649084|ref|XP_007430953.1| | PREDICTED: lysocardiolipin acyltransferase 1-like [Python bivittatus] | 0.0 |
| habu1_s313_g01503.t1 | gi|327262593|ref|XP_003216108.1| | PREDICTED: lysocardiolipin acyltransferase 1 [Anolis carolinensis] | 0.0 |
| habu1_s313_g01503.t1 | gi|558139060|ref|XP_006118128.1| | PREDICTED: lysocardiolipin acyltransferase 1 isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s313_g01503.t1 | gi|530591919|ref|XP_005289602.1| | PREDICTED: lysocardiolipin acyltransferase 1 isoform X2 [Chrysemys picta bellii] | 0.0 |
| habu1_s313_g01503.t1 | gi|641752995|ref|XP_008173228.1| | PREDICTED: lysocardiolipin acyltransferase 1 isoform X1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 9.9 |
| Venom grand-1 | 3.7 |
| Pit, infrared sensing | 6.9 |
| Nose | 11.7 |
| Brain-1 | 6.0 |
| Eye | 4.3 |
| fetal fibroblast | 15.3 |
| venom gland-2 | 5.0 |
| Brain-2 | 5.1 |
| Spleen | 3.5 |
| Lung | 4.6 |
| Liver | 8.2 |
| Kidney | 3.8 |
| Pancreas | 1.8 |
| Small intestine | 9.0 |
| Large intestine | 4.2 |
| Stomach | 4.6 |
| heart | 12.8 |
| ovary | 21.3 |
| cheek muscle | 14.4 |
Transcript
| Transcript ID | habu1_s313_g01503.t1 |
|---|---|
| Definition | - |
>habu1_s313_g01503.t1 catcggctgcttcgagacgctgactcgagtataagccgaggggggcatttttcagccccaaaaatgggctgaaaacctcg gcttatactcgagtatatacgcagaatctaaaatgcagtactcaaaagcaaggcttttcaaccagtggtacggcgatggc tgtggagatctgggggaagtgttggattttgacagaaccatggtgctatggagaggaatttattttgtacttgcattatt tttgggaagtttttttggaagcatcttcatgcttggtcccctactgccactgatgtctatttccccagcttggtatcgct ggcttactgatcgtgttgtggccacttggtttacacttccagtggccctgctggagatagtgtttgggtcaaaagtagtc ataacaggtgatggattcatccccggagaaagaagtgtcataatcatgaatcatcgaacacgaatggattggatgttttt atggagttgcttgctgagatatagctacctccgacttgaaaaaatctgcctcaaatctagtctcaaaggcattccgggat ttggctgggccatgcaggttgctgccttcattttcattcagaggaaatgggaagaagacaaacatcattttggaaatatg ctggattatttttgtgatattcatgagccactacaacttcttatctttcctgaaggaactgatctcacagatgaaactaa agcccgcagtgatacatttgctgaaaaaaatggacttcagaagtatgaatatgtcttgcacccaagaactacaggcttca cttttatagtggatcgtttaagagatggtaataaccttgatgctgttcatgacataacagtggcatatcctcaaaacgtt ccacaaactgagaaacaccttctgtgtggaaattttcccaaggaaattcattttcacgtctgcagacaccctgtagaatc cctgccgacctctgtggaagacttgcaactctggtgtcagaaacgctgggaagaaaaagaagaacggctgcgccatttct acgaaggcaaaaaatacttcgatgtgtcagggagaagcaaaatcccaccctgaggaacagtagcaattaaacagctccac gctccacagccctacttacagtcagcttccagttccattctgaccccagcaactcctgcttctgcttcaactccattcca gttccggaatatagctaaaatgctgggtcttagttccgcaggggtccccaacccccggtccatggaccggtaccgggctg cggcatgctagcaaccaggccgcacaaacaatcaaagccctatctatgggatgcaggcagtacacaaaaccacaccccct ccagtcagcagaaaaacatctctccatgtaaccggtccctgctgcccaaaaggttgtggacctctgctgtattgcatcaa atctctgtcagttggattagagaaggagtattttgatttaataattaagcttcctcagtgatgcatagagcaaataaact tatttgaaacctcgaagagt |
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Protein
| Protein ID | habu1_s313_g01503.t1 |
|---|---|
| Definition | - |
>habu1_s313_g01503.t1 MQYSKARLFNQWYGDGCGDLGEVLDFDRTMVLWRGIYFVLALFLGSFFGSIFMLGPLLPLMSISPAWYRWLTDRVVATWF TLPVALLEIVFGSKVVITGDGFIPGERSVIIMNHRTRMDWMFLWSCLLRYSYLRLEKICLKSSLKGIPGFGWAMQVAAFI FIQRKWEEDKHHFGNMLDYFCDIHEPLQLLIFPEGTDLTDETKARSDTFAEKNGLQKYEYVLHPRTTGFTFIVDRLRDGN NLDAVHDITVAYPQNVPQTEKHLLCGNFPKEIHFHVCRHPVESLPTSVEDLQLWCQKRWEEKEERLRHFYEGKKYFDVSG RSKIPPXGTVAIKQLHAPQPYLQSASSSILTPATPASASTPFQFRNIAKMLGLSSAGVPNPRSMDRYRAAAC |
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