Gene
| Gene Model ID | habu1_s313_g01505 |
|---|---|
| Locus | habu1_scaffold313 : 804532 ... 820995 : - |
| To GenomeBrowser | habu1_scaffold313:804532..820995 |
| Genes list of scaffold | habu1_scaffold313 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein lbh | GO:0005634 GO:0030193 GO:0045893 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s313_g01505.t1 | 1 | 1 | Lbh | 1 | 86 | 7.8e-36 | 122.2 | 5.70001e-40 | 8.5e-36 | 122.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s313_g01505.t1 | gi|602666275|ref|XP_007438715.1| | PREDICTED: protein LBH-like isoform X2 [Python bivittatus] | 0.0 |
| habu1_s313_g01505.t1 | gi|602666273|ref|XP_007438714.1| | PREDICTED: protein LBH-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s313_g01505.t1 | gi|327262591|ref|XP_003216107.1| | PREDICTED: protein LBH [Anolis carolinensis] | 0.0 |
| habu1_s313_g01505.t1 | gi|507541135|ref|XP_004654570.1| | PREDICTED: protein LBH [Jaculus jaculus] | 0.0 |
| habu1_s313_g01505.t1 | gi|471379824|ref|XP_004377709.1| | PREDICTED: protein LBH [Trichechus manatus latirostris] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 81.5 |
| Venom grand-1 | 24.3 |
| Pit, infrared sensing | 40.9 |
| Nose | 47.5 |
| Brain-1 | 13.4 |
| Eye | 30.1 |
| fetal fibroblast | 41.1 |
| venom gland-2 | 13.1 |
| Brain-2 | 10.3 |
| Spleen | 28.7 |
| Lung | 26.6 |
| Liver | 27.8 |
| Kidney | 22.9 |
| Pancreas | 33.5 |
| Small intestine | 13.8 |
| Large intestine | 15.6 |
| Stomach | 56.8 |
| heart | 120.2 |
| ovary | 62.5 |
| cheek muscle | 7.2 |
Transcript
| Transcript ID | habu1_s313_g01505.t1 |
|---|---|
| Definition | - |
>habu1_s313_g01505.t1 ggtacagtaagccataatagagagccaggggctctggatagaagttcagaaactcctggttccatcggatttatcccccc ccagtttgaaattttggtcttgcacaaaaacgggggctccaaatgtgcattttatggcaggtgcattcagtgggttaggc tcacactttagaactgagtgcagcccgatttctttgttgttagaagagcagtgagctgtgcggcaaagttgtataactgc cttcctggaatgttttcaagaaaggctggcttgatccctgattatctgagatcagctgacatgactgaggtgatgagtgc tccaactatggatgagattggtttaagcccccgcaaggatggcctatcctatcagattttccctgacccttcagattttg atcgttattgtaagctgaaggaccgtcttccttccattgtggtggagccaacagaaggagatgtagagagtggagaatta agatggccacctgaagagttcctggttcaggaagaagagaaacagaattgtgatgaagcaaagaaagagagcaaggagca gtaaaagcaccgaagatcttctgttctactcaagatgttaggtcatcttgagggggagagaacagctttctgaagggtct tttctacaaaagacattcaattttgcacctgcaagatcttagtttttttcatattctctattgagaactgaagcgcttga tgtgacaatctccagctaaaactaagaaagtttgggcaggcaaagcaagccaaaaatgattgcccttctcaagatcattg ttgaattctgtggtggttgcctggggcagccaggaaattagagggcgctttggtggaggaataggccagcaggaagcatg cttcttctgaagtgtgtggtattagaagaaataactgcaaatataaatgcagctaagttctgtaagggactgcctctggc tacaaatgcatgagaatagtgttcatctctcaaaatcttgccttctcatagtgtttttttctggttttatgtgcgcatgt gtttggaggctggaagacaagccactgaaatgctcctatgacattaccaagttaggcagttttcctgcggaacaccatag aggagcaatgggtcaataactaggttggccttgtacagcgtagcgtcttaaaaatcacaccatctttgtcaggctgcagg gtctggcactggcttgctcacctgttgcacataaactatatttttatgtctgtttttttcttggcacctctttaagcatg cattttaacatcgcagtgaatagctttgtatggccattgagctgttgactatagaaatggcctttactacttgttctgca gttattttgtttaggctgtaaaagatcacattttattttgtttgggaggtggggttggaagaaatgcttcttcagaaaaa cttcaggagattttgatatggaaaataagtaatattttctttcttgctactgaagctactgtttaactctctctgttata atgcatctggttgctgtgaaatgcagctttttcataagtactgatttataatttagtcatgtgtttaatgctggatcaaa ggctcatgattatagtacagggccaacaaggctgttaaataggaagagtttaagagaatcggtatcccctttaaaagcag gatggtgaaagtaggacttaccttaaaaaaacaaaaggtattacagcatctcagtattgtcgagaagataaccctttttt ttgaaccaaggatttttgattgacttaccttgttcacagattctcatttgcccattatcatctcattcctcatgtcccat atatctctcttctgagaaggcaaacaaatagttggataagctatattggcagccacattaaaaaaaaacagtatctgact tcttgacaggaagttccacaaagttgaaatttcaagtacggctttcagatattaaaagccaatgattccatattaactgt ggagaaactaaaacttcgtaatgtataaacattatagccttaacaagatagtcaaaataatccttagttttccatgatct tttccattcctttcctaatttgttggaactctgtatatgtgctatatataaaagacacacgcttacacacacatacactt atttttgatacctcatgagtagtgaaattgctggtaatgggttaaagttgcttgttgaaatcagcagggttacttttttc agtctcgtctggcatgtgttttccacataatggcaataacttaacagctgtgaatcattgttacatgtggatgtgagatt gtagggatgtagttgagtgttcttgtgtgtgtgtttttcagccaagaacctgtaacacatatactacctgtcttggtgga tgtttgggcatcactgaaattcgtcttgcacccttgcacttgtcaaggttgctttaaaatggatggatccagatgttttt gtatccttgagtctattcttgtcttgctgttcagtacaatgagctttcacacttgcacccaacccaaaatgccctatttt tttttccttcaaaagtcactttttgtttccattttttttgtcccagtttgcagttgtcaaatgttaaccactcagactcg gaaaaacaaaaatccttaatgcttaaggacagagtgggatcgttgtttgtctttgaatatttgcatatcatttttctgct tttttaaaagatacagttgttgcttgtatttctgtcacttttgaatgtgtctgaggaacaaagcactccagtggaacttt tcctgttatatatattacattctatatttctgtaaaattcttttttgagcctcagggaaaaagctagcatttttttcaaa ctacttttgtcactgtgacagttgtaaataaagtttgaaaatgctttccaaatt |
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Protein
| Protein ID | habu1_s313_g01505.t1 |
|---|---|
| Definition | - |
>habu1_s313_g01505.t1 MTEVMSAPTMDEIGLSPRKDGLSYQIFPDPSDFDRYCKLKDRLPSIVVEPTEGDVESGELRWPPEEFLVQEEEKQNCDEA KKESKEQ |
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