Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s313_g01508
Locus habu1_scaffold313 : 968670 ... 970165 : +
To GenomeBrowser habu1_scaffold313:968670..970165
Genes list of scaffold habu1_scaffold313

Annotation by Blast2GO
Annotation GO
alk tyrosine kinase receptor GO:0004672 GO:0006468 GO:0007165

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s313_g01508.t1 gi|602674905|ref|XP_007442940.1| PREDICTED: ALK tyrosine kinase receptor-like [Python bivittatus] 0.0
habu1_s313_g01508.t1 gi|530592090|ref|XP_005289683.1| PREDICTED: ALK tyrosine kinase receptor [Chrysemys picta bellii] 0.0
habu1_s313_g01508.t1 gi|558127971|ref|XP_006115670.1| PREDICTED: ALK tyrosine kinase receptor [Pelodiscus sinensis] 0.0
habu1_s313_g01508.t1 gi|560913932|ref|XP_006183233.1| PREDICTED: ALK tyrosine kinase receptor-like, partial [Camelus ferus] 0.0
habu1_s313_g01508.t1 gi|545818259|ref|XP_005662707.1| PREDICTED: ALK tyrosine kinase receptor-like isoform X1 [Sus scrofa] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.0
Brain-1 0.3
Eye 0.0
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 0.4
Spleen 0.0
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.0
ovary 0.0
cheek muscle 0.0

Transcript
Transcript IDhabu1_s313_g01508.t1
Definition-
>habu1_s313_g01508.t1
ccagagtggctctaccggcttaaagggaggactgaactgggggggggtctctggaagaggctgggacgggggaaagattt
tttttaaattttttttttgtcacctggccgttccccttgtggccgcctgataatatgaaaggcgctggtttcccgccgtt
ccttctggctcatctccttatctttgccactcaagggggaactgtggatgcgggcagccccctcttgggcgctcgagctg
gcggccagcagccgccccgagatgcgccgagtttctcccggcagcagagaaagagcttagccatggatttcatcgtgccg
tcgctgttccgaacctacctgagggagctggtgctgggtgacgggggcagaggcgaacccttgggcggcttcaaggcgca
ctgcagcctggtgctggactgcccgccgcttttgcgcgccgctagctcttggccgccgaggagcggagccgcagagcccg
ccggccgcgccagaagccagtccaaggtgctgaaagccggcgcggtgcgcaagctgcgccgcgccaagcagctggtgctg
gaagtgggagaaaccaacctaagggacgactgtgcctggcgttccgaggcaggagtcgtggcgacggcgagccggctcga
gtttaccctcaccgaggaattcagctggtggatccgctccggggaaggcaggctgagagttcggttgatgcccgaaagga
aggcgtcgttcttgggcagggaaggcagcttgtcagcggccatcagggcatcccggccccgcctatttttccagatggcc
accagaggtgagagaatagttggtgacttctgcgcctagataaagtcagcttccttgaggtttgaagaggggttacctag
gctgtctctgaggaaagtttgggaaacgtagcgggagtgaaaatgacagggcgggattaaaatcctcttttaggttagga
ggatttctgaatttctgctctcatttatcccaggtaaagcaagcctttacaattcactgtagtttttgtagtattaactg
agcagcatcctttggaaagagtttgtgatttgctgtgatatattcaagtggaatatcatnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnctcctcctccttcttcttcttcttcattttttttttttaaatccattatatttct
aattttctgcattctacatagtgttgcttatcctgaaagggaatcacatgagtacataaaataaataaccagtttccacc
cttccagttcagagtgtctaaatgcctattcctctccagtatgtagctcttaggggtttgttggagagtaatgcactgca
agaagttaatgtgctggttaatgactgcaataaagttattgtaaatcttaacatat

Protein
Protein IDhabu1_s313_g01508.t1
Definition-
>habu1_s313_g01508.t1
MKGAGFPPFLLAHLLIFATQGGTVDAGSPLLGARAGGQQPPRDAPSFSRQQRKSLAMDFIVPSLFRTYLRELVLGDGGRG
EPLGGFKAHCSLVLDCPPLLRAASSWPPRSGAAEPAGRARSQSKVLKAGAVRKLRRAKQLVLEVGETNLRDDCAWRSEAG
VVATASRLEFTLTEEFSWWIRSGEGRLRVRLMPERKASFLGREGSLSAAIRASRPRLFFQMATRGERIVGDFCA

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