Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s313_g01514
Locus habu1_scaffold313 : 1644492 ... 1689313 : -
To GenomeBrowser habu1_scaffold313:1644492..1689313
Genes list of scaffold habu1_scaffold313

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s313_g01514.t2 1 1 CLASP_N 537 693 2.0e-19 69.8 6.4e-21 1.6e-17 63.6

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 3.8
Venom grand-1 0.5
Pit, infrared sensing 2.0
Nose 8.7
Brain-1 0.4
Eye 5.5
fetal fibroblast 0.0
venom gland-2 0.2
Brain-2 1.5
Spleen 0.0
Lung 0.5
Liver 0.0
Kidney 0.2
Pancreas 0.0
Small intestine 0.0
Large intestine 0.0
Stomach 0.0
heart 0.0
ovary 1.3
cheek muscle 0.6

Transcript
Transcript IDhabu1_s313_g01514.t1
Definition-
>habu1_s313_g01514.t1
gtaagtcaaggactaaaccagtcattcatgcctctgcttataatcagtctcaagaatagttaccctgtggttaacttgct
tgatgcaacgtcttaaggtgagaatgtatagtcataaagattatgccatacattgtgatgtttatactgtcccttcatgc
agaaactgagatattctgggaaagaagtaacagcagttctgggtccagaaaaatggagtagaagttgcaactccttagcg
tgcaggtatctcaggctctttgaggcgcatggcaacacatgatgattttacggcaggaaagtaccaagctcaggttgcaa
tatattgtggcagcattcccaaactaaaatctggatgcaagtcatctagaggaggaagcattgattctactttgcagctc
catggaaatggatggatgacaacacatgagggcgaggaccctaccctggcatctcttcattcagttttaaaaaaacaatc
atgtttatggggaagcaaaggagaacctccagatgtttcttctctggagagctgcgacagtagacatggccttcagaaga
atacagacagtacagtcatgaatggctcttcacagatacctaatgcccagccaaagtacagtctcagtgaattggagata
aatagtgcagccatggagactgctcaaattaaggataagctcaaaaaaagaagaatgtcagaaggcctactggcatcaaa
aaaaggcttgctggacaaagctgttcccaagggacctgccctgaaaccagccatttccagatctgcttctcaaagactgc
tggtcactcccaagcccatgcctcctattcagagcataccaaacaccccagagaccaacagagctgaagaaacagagcca
caagttagggagaatggttcaggctctttacaggctgaaggagttaatccagaattaacatccacccagcagattgcaca
tggtcatgatgagaatccaaaaaaatctttaggtgctgccttgatcccacccatccccaagttaggaaaggcatatgaag
aaaattctcagaacgttgcagaatgcttttcaagcttgccacaggcagaatgtgtcccacttgctatagctgagtgtccc
aaaacaaggtcattgtcagagcctggtaatggtgaagacaacaaccaaaaaacactggaaactggattgtctgaacctgc
tttccagaatggctttcctgcacctttgaagattgttgggggatcactggcatccttactgccaccggccacctcctccc
tctgcctgaccaagaaagaaggcttgcattcaaatcctcacctgttaaaagatgatgaatggaaagagagcaatggaagg
attcatgtgacaatatccaagtcagctcaggagaaaatgcgtcagaagcagctaaaggagatagagtccttgcgtaaaga
aaaggaaaaggagaaagagagagaaaaggaaagatccacaaaaacccaggaacaacagtcaaggaatgctctggatggat
tcggttggcttcaccacaatggagccacccctgttactctccacctgagcaacccttgcagagcttctgtagggatggcc
ttaaggaaacgagtgaacaggccctcattgcccagcatccctgttatcagccaagacagcaatttcctgagacatgcatc
agctaattccctgccagcaaatctccaacactctccagaatgggaagaggaccttgtaagtagggatgcctttgagataa
gacccttgtctcatccagaacacgaattaatcgaggctctcaagtggctcagcagcaatgattggcacctgaaggagaaa
ggactcctcaacatcatatgcttggctacctgccattcagaagttctgcagggtagacttcatgacgtttccttggcagc
tacaaaggaggttagcaacttacgatctaaagtatctaggtttgctattgggacacttgctgaattgttcaaagctatga
agaagcacatggatcaagaggttgaggagatttctcgagtcctgcttcagaaggcaggtgatactagtgaattcatccag
aaagcagctgaccagtccctggggatcatggcacagagtgtgactccatcgcgagcaatgacagccctcatagccaatgg
agtgaaccaccgaaaccccctcattcgaaaatgtgctgctggacacttactgacagtcatggaacaaattggggctgaga
aactgctctcgggcaatcgggagagtacggagttattagtgcagacattagtgaagatggctcaggactgccatcaagac
acaaggtgttatggccggaagatgctgaacatgcttatgtgtcattcaaaatttgatgggtatttgaaacaaaatgtacc
atcacatgacctgcgggatgtcatggctgcaattaaacaaaaagggacagaagattcagcctcccaagcaacttctgcca
aaagttaccgaggatcaaagaatggcagtttgacaatctcactggacagcctgtcttcgggcgaagggtctaccatggat
gttcttaatttctcacaacctgcagctcgtggctcctcacttcgcagcgtagaaataatggagcagctgaaggagttgaa
caaacagcttggggccaaggaatttcagatacgaatagatggaatagccttactaatggaccattgcaaaaagaacccac
actttgtctcgtcaaatattgtgcagatttttgatacttttacactgaggcttcaggattccaacaagaaggtgaaccaa
tatgcattagaatcagttgtcaccatgattccagtgcttaagaatggctttattccagtcctgttctctgtggtgactat
agtgatggacaacttaaactcaaagaattctgggatttacagtgcggcaataaaagttctggacacaatgattacttatt
tagataacctattgctgcttcaaatatttgccagcagagtgcgttttctcactggccgagctcttcaggacatcacggat
cgtctggcaggtcttgtggctgttgcttatccacaaaagcctcaagctgcagaacgtcacatccttcctgttctctggta
tttcctgagtaacatgattggtaatggggtattacctgggaagagtggaaatgtgagaactgtggtctctaaactcacta
aaagcttgcacaaacaaatggggctgaaacttgaggaatatgcttgcaaccaaccacaacatgtgatcaaactgtttcaa
gatcttctagatatggatcttcactgaagagagcctattactgtttctggaacagttatagtgggacatttcaaagagga
gcaaaaatggataatgatacagaacttgccattacttaaccttttaatttttaagtctcctgttgaaagcttttagtaat
aacctacaatggaaaatgtatataatatattttgctgtagaattaaatcatctatttttttaaggtata
Transcript IDhabu1_s313_g01514.t2
Definition-
>habu1_s313_g01514.t2
gtaagtcaaggactaaaccagtcattcatgcctctgcttataatcagtctcaagaatagttaccctgtggttaacttgct
tgatgcaacgtcttaagaaactgagatattctgggaaagaagtaacagcagttctgggtccagaaaaatggagtagaagt
tgcaactccttagcgtgcaggtatctcaggctctttgaggcgcatggcaacacatgatgattttacggcaggaaagtacc
aagctcaggttgcaatatattgtggcagcattcccaaactaaaatctggatgcaagtcatctagaggaggaagcattgat
tctactttgcagctccatggaaatggatggatgacaacacatgagggcgaggaccctaccctggcatctcttcattcagt
tttaaaaaaacaatcatgtttatggggaagcaaaggagaacctccagatgtttcttctctggagagctgcgacagtagac
atggccttcagaagaatacagacagtacagtcatgaatggctcttcacagatacctaatgcccagccaaagtacagtctc
agtgaattggagataaatagtgcagccatggagactgctcaaattaaggataagctcaaaaaaagaagaatgtcagaagg
cctactggcatcaaaaaaaggcttgctggacaaagctgttcccaagggacctgccctgaaaccagccatttccagatctg
cttctcaaagactgctggtcactcccaagcccatgcctcctattcagagcataccaaacaccccagagaccaacagagct
gaagaaacagagccacaagttagggagaatggttcaggctctttacaggctgaaggagttaatccagaattaacatccac
ccagcagattgcacatggtcatgatgagaatccaaaaaaatctttaggtgctgccttgatcccacccatccccaagttag
gaaaggcatatgaagaaaattctcagaacgttgcagaatgcttttcaagcttgccacaggcagaatgtgtcccacttgct
atagctgagtgtcccaaaacaaggtcattgtcagagcctggtaatggtgaagacaacaaccaaaaaacactggaaactgg
attgtctgaacctgctttccagaatggctttcctgcacctttgaagattgttgggggatcactggcatccttactgccac
cggccacctcctccctctgcctgaccaagaaagaaggcttgcattcaaatcctcacctgttaaaagatgatgaatggaaa
gagagcaatggaaggattcatgtgacaatatccaagtcagctcaggagaaaatgcgtcagaagcagctaaaggagataga
gtccttgcgtaaagaaaaggaaaaggagaaagagagagaaaaggaaagatccacaaaaacccaggaacaacagtcaagga
atgctctggatggattcggttggcttcaccacaatggagccacccctgttactctccacctgagcaacccttgcagagct
tctgtagggatggccttaaggaaacgagtgaacaggccctcattgcccagcatccctgttatcagccaagacagcaattt
cctgagacatgcatcagctaattccctgccagcaaatctccaacactctccagaatgggaagaggaccttgtaagtaggg
atgcctttgagataagacccttgtctcatccagaacacgaattaatcgaggctctcaagtggctcagcagcaatgattgg
cacctgaaggagaaaggactcctcaacatcatatgcttggctacctgccattcagaagttctgcagggtagacttcatga
cgtttccttggcagctacaaaggaggttagcaacttacgatctaaagtatctaggtttgctattgggacacttgctgaat
tgttcaaagctatgaagaagcacatggatcaagaggttgaggagatttctcgagtcctgcttcagaaggcaggtgatact
agtgaattcatccagaaagcagctgaccagtccctggggatcatggcacagagtgtgactccatcgcgagcaatgacagc
cctcatagccaatggagtgaaccaccgaaaccccctcattcgaaaatgtgctgctggacacttactgacagtcatggaac
aaattggggctgagaaactgctctcgggcaatcgggagagtacggagttattagtgcagacattagtgaagatggctcag
gactgccatcaagacacaaggtgttatggccggaagatgctgaacatgcttatgtgtcattcaaaatttgatgggtattt
gaaacaaaatgtaccatcacatgacctgcgggatgtcatggctgcaattaaacaaaaagggacagaagattcagcctccc
aagcaacttctgccaaaagttaccgaggatcaaagaatggcagtttgacaatctcactggacagcctgtcttcgggcgaa
gggtctaccatggatgttcttaatttctcacaacctgcagctcgtggctcctcacttcgcagcgtagaaataatggagca
gctgaaggagttgaacaaacagcttggggccaaggaatttcagatacgaatagatggaatagccttactaatggaccatt
gcaaaaagaacccacactttgtctcgtcaaatattgtgcagatttttgatacttttacactgaggcttcaggattccaac
aagaaggtgaaccaatatgcattagaatcagttgtcaccatgattccagtgcttaagaatggctttattccagtcctgtt
ctctgtggtgactatagtgatggacaacttaaactcaaagaattctgggatttacagtgcggcaataaaagttctggaca
caatgattacttatttagataacctattgctgcttcaaatatttgccagcagagtgcgttttctcactggccgagctctt
caggacatcacggatcgtctggcaggtcttgtggctgttgcttatccacaaaagcctcaagctgcagaacgtcacatcct
tcctgttctctggtatttcctgagtaacatgattggtaatggggtattacctgggaagagtggaaatgtgagaactgtgg
tctctaaactcactaaaagcttgcacaaacaaatggggctgaaacttgaggaatatgcttgcaaccaaccacaacatgtg
atcaaactgtttcaagatcttctagatatggatcttcactgaagagagcctattactgtttctggaacagttatagtggg
acatttcaaagaggagcaaaaatggataatgatacagaacttgccattacttaaccttttaatttttaagtctcctgttg
aaagcttttagtaataacctacaatggaaaatgtatataatatattttgctgtagaattaaatcatctatttttttaagg
tata

Protein
Protein IDhabu1_s313_g01514.t1
Definition-
>habu1_s313_g01514.t1
MATHDDFTAGKYQAQVAIYCGSIPKLKSGCKSSRGGSIDSTLQLHGNGWMTTHEGEDPTLASLHSVLKKQSCLWGSKGEP
PDVSSLESCDSRHGLQKNTDSTVMNGSSQIPNAQPKYSLSELEINSAAMETAQIKDKLKKRRMSEGLLASKKGLLDKAVP
KGPALKPAISRSASQRLLVTPKPMPPIQSIPNTPETNRAEETEPQVRENGSGSLQAEGVNPELTSTQQIAHGHDENPKKS
LGAALIPPIPKLGKAYEENSQNVAECFSSLPQAECVPLAIAECPKTRSLSEPGNGEDNNQKTLETGLSEPAFQNGFPAPL
KIVGGSLASLLPPATSSLCLTKKEGLHSNPHLLKDDEWKESNGRIHVTISKSAQEKMRQKQLKEIESLRKEKEKEKEREK
ERSTKTQEQQSRNALDGFGWLHHNGATPVTLHLSNPCRASVGMALRKRVNRPSLPSIPVISQDSNFLRHASANSLPANLQ
HSPEWEEDLVSRDAFEIRPLSHPEHELIEALKWLSSNDWHLKEKGLLNIICLATCHSEVLQGRLHDVSLAATKEVSNLRS
KVSRFAIGTLAELFKAMKKHMDQEVEEISRVLLQKAGDTSEFIQKAADQSLGIMAQSVTPSRAMTALIANGVNHRNPLIR
KCAAGHLLTVMEQIGAEKLLSGNRESTELLVQTLVKMAQDCHQDTRCYGRKMLNMLMCHSKFDGYLKQNVPSHDLRDVMA
AIKQKGTEDSASQATSAKSYRGSKNGSLTISLDSLSSGEGSTMDVLNFSQPAARGSSLRSVEIMEQLKELNKQLGAKEFQ
IRIDGIALLMDHCKKNPHFVSSNIVQIFDTFTLRLQDSNKKVNQYALESVVTMIPVLKNGFIPVLFSVVTIVMDNLNSKN
SGIYSAAIKVLDTMITYLDNLLLLQIFASRVRFLTGRALQDITDRLAGLVAVAYPQKPQAAERHILPVLWYFLSNMIGNG
VLPGKSGNVRTVVSKLTKSLHKQMGLKLEEYACNQPQHVIKLFQDLLDMDLH
Protein IDhabu1_s313_g01514.t2
Definition-
>habu1_s313_g01514.t2
MATHDDFTAGKYQAQVAIYCGSIPKLKSGCKSSRGGSIDSTLQLHGNGWMTTHEGEDPTLASLHSVLKKQSCLWGSKGEP
PDVSSLESCDSRHGLQKNTDSTVMNGSSQIPNAQPKYSLSELEINSAAMETAQIKDKLKKRRMSEGLLASKKGLLDKAVP
KGPALKPAISRSASQRLLVTPKPMPPIQSIPNTPETNRAEETEPQVRENGSGSLQAEGVNPELTSTQQIAHGHDENPKKS
LGAALIPPIPKLGKAYEENSQNVAECFSSLPQAECVPLAIAECPKTRSLSEPGNGEDNNQKTLETGLSEPAFQNGFPAPL
KIVGGSLASLLPPATSSLCLTKKEGLHSNPHLLKDDEWKESNGRIHVTISKSAQEKMRQKQLKEIESLRKEKEKEKEREK
ERSTKTQEQQSRNALDGFGWLHHNGATPVTLHLSNPCRASVGMALRKRVNRPSLPSIPVISQDSNFLRHASANSLPANLQ
HSPEWEEDLVSRDAFEIRPLSHPEHELIEALKWLSSNDWHLKEKGLLNIICLATCHSEVLQGRLHDVSLAATKEVSNLRS
KVSRFAIGTLAELFKAMKKHMDQEVEEISRVLLQKAGDTSEFIQKAADQSLGIMAQSVTPSRAMTALIANGVNHRNPLIR
KCAAGHLLTVMEQIGAEKLLSGNRESTELLVQTLVKMAQDCHQDTRCYGRKMLNMLMCHSKFDGYLKQNVPSHDLRDVMA
AIKQKGTEDSASQATSAKSYRGSKNGSLTISLDSLSSGEGSTMDVLNFSQPAARGSSLRSVEIMEQLKELNKQLGAKEFQ
IRIDGIALLMDHCKKNPHFVSSNIVQIFDTFTLRLQDSNKKVNQYALESVVTMIPVLKNGFIPVLFSVVTIVMDNLNSKN
SGIYSAAIKVLDTMITYLDNLLLLQIFASRVRFLTGRALQDITDRLAGLVAVAYPQKPQAAERHILPVLWYFLSNMIGNG
VLPGKSGNVRTVVSKLTKSLHKQMGLKLEEYACNQPQHVIKLFQDLLDMDLH

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